Miyakogusa Predicted Gene

Lj0g3v0334789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334789.1 Non Characterized Hit- tr|D7TDH9|D7TDH9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.31,1e-17,seg,NULL;
coiled-coil,NULL,gene.Ljchr0_pseudomol_20120828.path1.gene34631.1
         (130 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g069825.1 | CRS2-associated factor 1 | HC | chr8:29482243-...   112   6e-26

>Medtr8g069825.1 | CRS2-associated factor 1 | HC |
           chr8:29482243-29475430 | 20130731
          Length = 574

 Score =  112 bits (281), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 82/130 (63%)

Query: 1   MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
           MLSLW+SA++S+KALLLEE+ +GPDALLEKV+EFEGIS A EHSYPAF   S+D  + S 
Sbjct: 445 MLSLWRSAIESNKALLLEEFNIGPDALLEKVEEFEGISHAIEHSYPAFTSSSDDAFERSN 504

Query: 61  ANFEIGTEDGYPSDSLLAXXXXXXXXXXXXXXXXXXXXXXGLYDIVDSSAQPRSLPVDKI 120
              + GTE+ Y SD +                           D+VD+SA+P SLPVD +
Sbjct: 505 VYLQDGTENNYSSDGVDDVDDYDNNSDDEDDYDYYNDEDDEFNDMVDTSAEPGSLPVDLL 564

Query: 121 VNKLKPRQAE 130
           V+KLK RQ E
Sbjct: 565 VDKLKLRQKE 574