Miyakogusa Predicted Gene

Lj0g3v0334479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334479.1 Non Characterized Hit- tr|K4BML6|K4BML6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,71.21,3e-19,
,CUFF.22832.1
         (84 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g013100.1 | D-glycerate dehydrogenase/hydroxypyruvate redu...   105   8e-24
Medtr4g012960.1 | D-glycerate dehydrogenase/hydroxypyruvate redu...   105   8e-24
Medtr4g013135.1 | D-glycerate dehydrogenase/hydroxypyruvate redu...   105   9e-24
Medtr4g013090.1 | D-glycerate dehydrogenase/hydroxypyruvate redu...   100   2e-22
Medtr2g101840.1 | D-glycerate dehydrogenase/hydroxypyruvate redu...    66   6e-12

>Medtr4g013100.1 | D-glycerate dehydrogenase/hydroxypyruvate
          reductase | HC | chr4:3525391-3522270 | 20130731
          Length = 314

 Score =  105 bits (263), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MGSIGVLLVC-QVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADA 59
          MGSIGVLLV  QV+PYLEQEL+KR+ LFR WD+PQK+QLLT H ASIRAVVG+A AGAD+
Sbjct: 1  MGSIGVLLVSHQVIPYLEQELNKRYNLFRLWDFPQKSQLLTQHGASIRAVVGDAFAGADS 60

Query: 60 ELIDALP 66
          +LI+ALP
Sbjct: 61 DLIEALP 67


>Medtr4g012960.1 | D-glycerate dehydrogenase/hydroxypyruvate
          reductase | HC | chr4:3482543-3479185 | 20130731
          Length = 310

 Score =  105 bits (262), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 48/66 (72%), Positives = 57/66 (86%)

Query: 1  MGSIGVLLVCQVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADAE 60
          M SIGVLLV QV+PYLEQEL+KR+ L+R WD+PQK+Q L  H ASIRAVVG ++AGAD+E
Sbjct: 1  MESIGVLLVAQVIPYLEQELNKRYNLYRIWDFPQKSQFLIQHGASIRAVVGRSTAGADSE 60

Query: 61 LIDALP 66
          LIDALP
Sbjct: 61 LIDALP 66


>Medtr4g013135.1 | D-glycerate dehydrogenase/hydroxypyruvate
          reductase | HC | chr4:3534451-3537517 | 20130731
          Length = 313

 Score =  105 bits (262), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 49/66 (74%), Positives = 58/66 (87%)

Query: 1  MGSIGVLLVCQVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADAE 60
          MG I VLLV +V+PYL+QEL+KR+ LFR WD+PQK+QLLT H ASIRAVVGNASAGAD+ 
Sbjct: 1  MGLIDVLLVAKVIPYLDQELNKRYNLFRIWDFPQKSQLLTQHGASIRAVVGNASAGADSN 60

Query: 61 LIDALP 66
          LI+ALP
Sbjct: 61 LIEALP 66


>Medtr4g013090.1 | D-glycerate dehydrogenase/hydroxypyruvate
          reductase | HC | chr4:3521833-3518948 | 20130731
          Length = 313

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/66 (74%), Positives = 53/66 (80%)

Query: 1  MGSIGVLLVCQVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADAE 60
          M SI VLLV QV+PYLEQEL KR+ LFR  DYPQK+Q LT H A IRAVVGN S GAD+E
Sbjct: 1  MESIDVLLVAQVLPYLEQELSKRYNLFRICDYPQKSQFLTQHGALIRAVVGNGSCGADSE 60

Query: 61 LIDALP 66
          LIDALP
Sbjct: 61 LIDALP 66


>Medtr2g101840.1 | D-glycerate dehydrogenase/hydroxypyruvate
          reductase | HC | chr2:43814876-43817507 | 20130731
          Length = 314

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%)

Query: 1  MGSIGVLLVCQVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADAE 60
          M SIGVL+   +   LE++L  RF LF+ W+YP        HA SIRA+V N   GADA 
Sbjct: 1  MESIGVLMTYPMNTNLEEQLSNRFNLFKLWNYPSFQSFSETHANSIRALVCNTKIGADAN 60

Query: 61 LIDALP 66
           ID+LP
Sbjct: 61 TIDSLP 66