Miyakogusa Predicted Gene

Lj0g3v0334409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334409.1 tr|B9I3A8|B9I3A8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_570097 PE=4
SV=1,38.75,9e-18,seg,NULL,CUFF.22837.1
         (433 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g081560.1 | hypothetical protein | LC | chr3:36924909-3693...   298   9e-81
Medtr3g081560.3 | hypothetical protein | LC | chr3:36924895-3693...   298   1e-80
Medtr3g081560.2 | hypothetical protein | LC | chr3:36924907-3693...   297   1e-80
Medtr1g072780.2 | PWWP domain protein | HC | chr1:32307252-32311...    64   3e-10
Medtr1g072780.1 | PWWP domain protein | HC | chr1:32307252-32311...    64   3e-10
Medtr1g066890.1 | PWWP domain protein | HC | chr1:28755074-28752...    61   2e-09
Medtr1g049120.1 | PWWP domain protein | HC | chr1:18965627-18971...    58   2e-08
Medtr1g049120.2 | PWWP domain protein | HC | chr1:18965539-18969...    58   2e-08
Medtr2g047912.1 | dentin sialophosphoprotein-like protein, putat...    55   2e-07
Medtr2g104120.2 | PWWP domain protein | HC | chr2:44863629-44866...    53   6e-07
Medtr2g104120.1 | PWWP domain protein | HC | chr2:44863586-44866...    53   6e-07

>Medtr3g081560.1 | hypothetical protein | LC |
           chr3:36924909-36932622 | 20130731
          Length = 990

 Score =  298 bits (762), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 214/474 (45%), Positives = 269/474 (56%), Gaps = 69/474 (14%)

Query: 5   PEFINASPKELLSELHSKAVDCMFPTENKSFELVEWFFSRYRISTYHDEAELATSLVDEK 64
           P+F++AS  +LLS L S AVDCM P E+K+F+LVEWFF + RIS YHDEAELATSLV   
Sbjct: 380 PDFVSASSGDLLSGLFSTAVDCMSPIEDKNFDLVEWFFCKKRISEYHDEAELATSLVSVN 439

Query: 65  GGKTGKRVGSNLLDIKS-GKRKNNKMESSVKRKTKSLYGLSNMNIN------TSTGDSLR 117
           GGKT K  G++LLD KS  KRKN K E++ + K K L GLS+M  N      TS+G  L+
Sbjct: 440 GGKTVKPGGNDLLDTKSRKKRKNTKAENAARHKMKPLSGLSDMKGNVSIVDCTSSGKKLQ 499

Query: 118 L----------------EINLNEGSSKGSSVTEAPQNLSCRTSKGKVGPKKRRKIEAPQD 161
                            E  +NE  +  SSV E  QN +   S+ K  PKK++K+EA Q 
Sbjct: 500 QKRKVEEITSLHQLQSPETTINESGNICSSVPET-QNHNVLASEKKTRPKKKQKLEAAQK 558

Query: 162 PQIASVYTDV--KGTKCSSLVIDLR-LSP------HR----------------PGVTLEK 196
            Q A + +    K T+CSSLVIDL+ +SP      H+                P + + +
Sbjct: 559 YQGAQLASHFHSKSTECSSLVIDLQFMSPPLPVDIHQKSNGENKEEQVFKVSNPEIRVSQ 618

Query: 197 CFAGTTANHSLLVSTASEAGTVSQEVPIGNVAKHNFFENPASEGGTISQQGLVGNISKHR 256
                    +LLV T SEAGT SQE    N+  HN   N ASE G++ Q   VG  S   
Sbjct: 619 GELDGNVTRNLLVGT-SEAGTASQEGFAANITNHNMSVNAASELGSVYQARFVGTAS--- 674

Query: 257 LFXXXXXXXXXXXXNKTELKSTVEKQAEEHHHTKNVTELPDLNGICTESDLIRKEVETVN 316
                         NK E K   +K  +EH +TK+  E+PDLN I  ES  IRKE   VN
Sbjct: 675 -------------INKREKKKRTKKAPQEHPNTKHAREIPDLNNISFESSSIRKESGPVN 721

Query: 317 VLTPGFRPGKSRSLSGCSRPSNTDRV--VETNGESQPGTFLHLQFSPGAYIPSKDELLTA 374
            L+   + G  RSLS CS  + T  +  VE NG+S  GTFL LQF+PG  IPSK++LL  
Sbjct: 722 FLSSELKSGHPRSLSACSSRTKTVNLGGVEYNGKSV-GTFLFLQFAPGVDIPSKEDLLKT 780

Query: 375 FYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEKNKPFGTALVDYKLH 428
           F +FGPLKASE+Q+ K  G AQIVFVRS DA EA  +LE+N PFG ALV Y+LH
Sbjct: 781 FCRFGPLKASETQMMKDNGSAQIVFVRSIDAAEALRNLEQNNPFGAALVGYRLH 834


>Medtr3g081560.3 | hypothetical protein | LC |
           chr3:36924895-36932622 | 20130731
          Length = 956

 Score =  298 bits (762), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 214/474 (45%), Positives = 269/474 (56%), Gaps = 69/474 (14%)

Query: 5   PEFINASPKELLSELHSKAVDCMFPTENKSFELVEWFFSRYRISTYHDEAELATSLVDEK 64
           P+F++AS  +LLS L S AVDCM P E+K+F+LVEWFF + RIS YHDEAELATSLV   
Sbjct: 346 PDFVSASSGDLLSGLFSTAVDCMSPIEDKNFDLVEWFFCKKRISEYHDEAELATSLVSVN 405

Query: 65  GGKTGKRVGSNLLDIKS-GKRKNNKMESSVKRKTKSLYGLSNMNIN------TSTGDSLR 117
           GGKT K  G++LLD KS  KRKN K E++ + K K L GLS+M  N      TS+G  L+
Sbjct: 406 GGKTVKPGGNDLLDTKSRKKRKNTKAENAARHKMKPLSGLSDMKGNVSIVDCTSSGKKLQ 465

Query: 118 L----------------EINLNEGSSKGSSVTEAPQNLSCRTSKGKVGPKKRRKIEAPQD 161
                            E  +NE  +  SSV E  QN +   S+ K  PKK++K+EA Q 
Sbjct: 466 QKRKVEEITSLHQLQSPETTINESGNICSSVPET-QNHNVLASEKKTRPKKKQKLEAAQK 524

Query: 162 PQIASVYTDV--KGTKCSSLVIDLR-LSP------HR----------------PGVTLEK 196
            Q A + +    K T+CSSLVIDL+ +SP      H+                P + + +
Sbjct: 525 YQGAQLASHFHSKSTECSSLVIDLQFMSPPLPVDIHQKSNGENKEEQVFKVSNPEIRVSQ 584

Query: 197 CFAGTTANHSLLVSTASEAGTVSQEVPIGNVAKHNFFENPASEGGTISQQGLVGNISKHR 256
                    +LLV T SEAGT SQE    N+  HN   N ASE G++ Q   VG  S   
Sbjct: 585 GELDGNVTRNLLVGT-SEAGTASQEGFAANITNHNMSVNAASELGSVYQARFVGTAS--- 640

Query: 257 LFXXXXXXXXXXXXNKTELKSTVEKQAEEHHHTKNVTELPDLNGICTESDLIRKEVETVN 316
                         NK E K   +K  +EH +TK+  E+PDLN I  ES  IRKE   VN
Sbjct: 641 -------------INKREKKKRTKKAPQEHPNTKHAREIPDLNNISFESSSIRKESGPVN 687

Query: 317 VLTPGFRPGKSRSLSGCSRPSNTDRV--VETNGESQPGTFLHLQFSPGAYIPSKDELLTA 374
            L+   + G  RSLS CS  + T  +  VE NG+S  GTFL LQF+PG  IPSK++LL  
Sbjct: 688 FLSSELKSGHPRSLSACSSRTKTVNLGGVEYNGKSV-GTFLFLQFAPGVDIPSKEDLLKT 746

Query: 375 FYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEKNKPFGTALVDYKLH 428
           F +FGPLKASE+Q+ K  G AQIVFVRS DA EA  +LE+N PFG ALV Y+LH
Sbjct: 747 FCRFGPLKASETQMMKDNGSAQIVFVRSIDAAEALRNLEQNNPFGAALVGYRLH 800


>Medtr3g081560.2 | hypothetical protein | LC |
           chr3:36924907-36932614 | 20130731
          Length = 1012

 Score =  297 bits (761), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 214/474 (45%), Positives = 269/474 (56%), Gaps = 69/474 (14%)

Query: 5   PEFINASPKELLSELHSKAVDCMFPTENKSFELVEWFFSRYRISTYHDEAELATSLVDEK 64
           P+F++AS  +LLS L S AVDCM P E+K+F+LVEWFF + RIS YHDEAELATSLV   
Sbjct: 402 PDFVSASSGDLLSGLFSTAVDCMSPIEDKNFDLVEWFFCKKRISEYHDEAELATSLVSVN 461

Query: 65  GGKTGKRVGSNLLDIKS-GKRKNNKMESSVKRKTKSLYGLSNMNIN------TSTGDSLR 117
           GGKT K  G++LLD KS  KRKN K E++ + K K L GLS+M  N      TS+G  L+
Sbjct: 462 GGKTVKPGGNDLLDTKSRKKRKNTKAENAARHKMKPLSGLSDMKGNVSIVDCTSSGKKLQ 521

Query: 118 L----------------EINLNEGSSKGSSVTEAPQNLSCRTSKGKVGPKKRRKIEAPQD 161
                            E  +NE  +  SSV E  QN +   S+ K  PKK++K+EA Q 
Sbjct: 522 QKRKVEEITSLHQLQSPETTINESGNICSSVPET-QNHNVLASEKKTRPKKKQKLEAAQK 580

Query: 162 PQIASVYTDV--KGTKCSSLVIDLR-LSP------HR----------------PGVTLEK 196
            Q A + +    K T+CSSLVIDL+ +SP      H+                P + + +
Sbjct: 581 YQGAQLASHFHSKSTECSSLVIDLQFMSPPLPVDIHQKSNGENKEEQVFKVSNPEIRVSQ 640

Query: 197 CFAGTTANHSLLVSTASEAGTVSQEVPIGNVAKHNFFENPASEGGTISQQGLVGNISKHR 256
                    +LLV T SEAGT SQE    N+  HN   N ASE G++ Q   VG  S   
Sbjct: 641 GELDGNVTRNLLVGT-SEAGTASQEGFAANITNHNMSVNAASELGSVYQARFVGTAS--- 696

Query: 257 LFXXXXXXXXXXXXNKTELKSTVEKQAEEHHHTKNVTELPDLNGICTESDLIRKEVETVN 316
                         NK E K   +K  +EH +TK+  E+PDLN I  ES  IRKE   VN
Sbjct: 697 -------------INKREKKKRTKKAPQEHPNTKHAREIPDLNNISFESSSIRKESGPVN 743

Query: 317 VLTPGFRPGKSRSLSGCSRPSNTDRV--VETNGESQPGTFLHLQFSPGAYIPSKDELLTA 374
            L+   + G  RSLS CS  + T  +  VE NG+S  GTFL LQF+PG  IPSK++LL  
Sbjct: 744 FLSSELKSGHPRSLSACSSRTKTVNLGGVEYNGKSV-GTFLFLQFAPGVDIPSKEDLLKT 802

Query: 375 FYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEKNKPFGTALVDYKLH 428
           F +FGPLKASE+Q+ K  G AQIVFVRS DA EA  +LE+N PFG ALV Y+LH
Sbjct: 803 FCRFGPLKASETQMMKDNGSAQIVFVRSIDAAEALRNLEQNNPFGAALVGYRLH 856


>Medtr1g072780.2 | PWWP domain protein | HC | chr1:32307252-32311486
           | 20130731
          Length = 994

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 50/79 (63%)

Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
           L L F+    +PS+  L   F  FGPLK SE+++ +G+  A++VF +  DA  AF S ++
Sbjct: 889 LVLNFADLDSVPSETSLNNIFKHFGPLKESETEIDRGSRRARVVFKKCADAQAAFGSAKQ 948

Query: 415 NKPFGTALVDYKLHHLPAA 433
              FG +LVDY+L++ P+A
Sbjct: 949 FNIFGRSLVDYQLNYSPSA 967


>Medtr1g072780.1 | PWWP domain protein | HC | chr1:32307252-32311193
           | 20130731
          Length = 994

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 50/79 (63%)

Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
           L L F+    +PS+  L   F  FGPLK SE+++ +G+  A++VF +  DA  AF S ++
Sbjct: 889 LVLNFADLDSVPSETSLNNIFKHFGPLKESETEIDRGSRRARVVFKKCADAQAAFGSAKQ 948

Query: 415 NKPFGTALVDYKLHHLPAA 433
              FG +LVDY+L++ P+A
Sbjct: 949 FNIFGRSLVDYQLNYSPSA 967


>Medtr1g066890.1 | PWWP domain protein | HC | chr1:28755074-28752288
           | 20130731
          Length = 928

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 334 SRPSNTDRVVETNGESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTG 393
           S PSN    VE   ES P T L L+F+    +PS  +L   F +FGPL  S+++L + T 
Sbjct: 809 SEPSN---YVENVNESSP-TSLTLKFTNLDSVPSTADLNKIFGRFGPLVESKTELLERTN 864

Query: 394 VAQIVFVRSTDAGEAFHSLEKNKPFGTALVDYKLHHLP 431
            A++VF R  DA  AF S  K   FG +L  Y+L  LP
Sbjct: 865 RARVVFKRRCDAETAFSSAGKYSIFGPSLQSYRLRILP 902


>Medtr1g049120.1 | PWWP domain protein | HC | chr1:18965627-18971838
           | 20130731
          Length = 938

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 50/79 (63%)

Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
           L + F+    +P +  L   F +FGPLK SE+++ + +  A++VF +  DA  AF+S +K
Sbjct: 833 LVMNFAELNSVPLEANLNKMFKRFGPLKESETEVDRVSSRARVVFKKCVDAEVAFNSAKK 892

Query: 415 NKPFGTALVDYKLHHLPAA 433
              FG+ LV+Y+L++ P+A
Sbjct: 893 FNIFGSVLVNYQLNYTPSA 911


>Medtr1g049120.2 | PWWP domain protein | HC | chr1:18965539-18969182
           | 20130731
          Length = 938

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 50/79 (63%)

Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
           L + F+    +P +  L   F +FGPLK SE+++ + +  A++VF +  DA  AF+S +K
Sbjct: 833 LVMNFAELNSVPLEANLNKMFKRFGPLKESETEVDRVSSRARVVFKKCVDAEVAFNSAKK 892

Query: 415 NKPFGTALVDYKLHHLPAA 433
              FG+ LV+Y+L++ P+A
Sbjct: 893 FNIFGSVLVNYQLNYTPSA 911


>Medtr2g047912.1 | dentin sialophosphoprotein-like protein, putative
           | LC | chr2:21013129-21015760 | 20130731
          Length = 678

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 48/79 (60%)

Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
           L + F+    +PS+  L   F +FG L  SE+++ + +  A++VF +  DA  A  S +K
Sbjct: 593 LVMNFTEFKSVPSETNLNKMFRRFGRLNESETEVDRVSSRARVVFKKRVDAEVALGSAKK 652

Query: 415 NKPFGTALVDYKLHHLPAA 433
            K FG+ LV+Y+L++ P+A
Sbjct: 653 FKIFGSVLVNYQLNYTPSA 671


>Medtr2g104120.2 | PWWP domain protein | HC | chr2:44863629-44866684
           | 20130731
          Length = 854

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 334 SRPSNTDRVVETNGESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTG 393
           S PSN    VE   +S P T L L+F+    +P+  +L   F +FG L  S+++L + T 
Sbjct: 733 SEPSNH---VEHVNDSSP-TSLTLKFTNLDSVPTTTDLNKIFGRFGTLIESKTKLLEKTN 788

Query: 394 VAQIVFVRSTDAGEAFHSLEKNKPFGTALVDYKLHHLP 431
            A++VF R  DA  AF S  K   FG +L  Y+L  LP
Sbjct: 789 RAKVVFERYCDAETAFSSAGKYSIFGPSLQSYRLKILP 826


>Medtr2g104120.1 | PWWP domain protein | HC | chr2:44863586-44866594
           | 20130731
          Length = 854

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 334 SRPSNTDRVVETNGESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTG 393
           S PSN    VE   +S P T L L+F+    +P+  +L   F +FG L  S+++L + T 
Sbjct: 733 SEPSNH---VEHVNDSSP-TSLTLKFTNLDSVPTTTDLNKIFGRFGTLIESKTKLLEKTN 788

Query: 394 VAQIVFVRSTDAGEAFHSLEKNKPFGTALVDYKLHHLP 431
            A++VF R  DA  AF S  K   FG +L  Y+L  LP
Sbjct: 789 RAKVVFERYCDAETAFSSAGKYSIFGPSLQSYRLKILP 826