Miyakogusa Predicted Gene

Lj0g3v0334309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334309.1 Non Characterized Hit- tr|E0CNX1|E0CNX1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.61,0.000000000000001,seg,NULL,CUFF.22836.1
         (241 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034050.3 | embryo defective 1273 protein, putative | HC |...   353   1e-97
Medtr1g034050.2 | embryo defective 1273 protein, putative | HC |...   353   1e-97
Medtr1g034050.1 | embryo defective 1273 protein, putative | HC |...   353   1e-97
Medtr1g017160.1 | transmembrane protein, putative | HC | chr1:46...    65   5e-11

>Medtr1g034050.3 | embryo defective 1273 protein, putative | HC |
           chr1:12319482-12317262 | 20130731
          Length = 228

 Score =  353 bits (905), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 165/215 (76%), Positives = 183/215 (85%)

Query: 23  FEPPFLGFKGTSCFVEKNNCCLGVKPFCASQKTGSKISCGMNMSAHQSDDHRKMKLEELL 82
           F+PP LGFKGTSC VEK  CCLG+KPF ASQKT  KISC MNMSAHQSDD RK++L +L+
Sbjct: 12  FQPPLLGFKGTSCSVEKRGCCLGLKPFRASQKTWPKISCAMNMSAHQSDDDRKIQLAQLI 71

Query: 83  DKARTLWDTSPEPVKNFPWNRALDNFIQLILDLTLAVVKYLSVPLFAVTSISELSYCAHE 142
           DKAR LWD+SPEPVKNFPWN  L NFIQL+LDLTLAVVKYL+VP+FAVT ISELSYCAH+
Sbjct: 72  DKARKLWDSSPEPVKNFPWNTTLGNFIQLVLDLTLAVVKYLAVPVFAVTCISELSYCAHQ 131

Query: 143 RKXXXXXXXXXFGVAIAGILKETALDLSPRLRDAEVPWHLIAVAIFFTMIKLPGPYYPYW 202
           RK          G A+AGILK+TAL+LSPRLRDA+VPWHLIA+AI FT+IKLPGPYYPYW
Sbjct: 132 RKLFVVPIPVLLGAAVAGILKDTALELSPRLRDAQVPWHLIAIAIVFTLIKLPGPYYPYW 191

Query: 203 GRIFIPHFANGVLLRTLWFAILWYRRPKALKMSDS 237
           GRI IPHFANGVLLR LWFAI W RRPK LKM+DS
Sbjct: 192 GRILIPHFANGVLLRALWFAIFWNRRPKVLKMTDS 226


>Medtr1g034050.2 | embryo defective 1273 protein, putative | HC |
           chr1:12319482-12317262 | 20130731
          Length = 228

 Score =  353 bits (905), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 165/215 (76%), Positives = 183/215 (85%)

Query: 23  FEPPFLGFKGTSCFVEKNNCCLGVKPFCASQKTGSKISCGMNMSAHQSDDHRKMKLEELL 82
           F+PP LGFKGTSC VEK  CCLG+KPF ASQKT  KISC MNMSAHQSDD RK++L +L+
Sbjct: 12  FQPPLLGFKGTSCSVEKRGCCLGLKPFRASQKTWPKISCAMNMSAHQSDDDRKIQLAQLI 71

Query: 83  DKARTLWDTSPEPVKNFPWNRALDNFIQLILDLTLAVVKYLSVPLFAVTSISELSYCAHE 142
           DKAR LWD+SPEPVKNFPWN  L NFIQL+LDLTLAVVKYL+VP+FAVT ISELSYCAH+
Sbjct: 72  DKARKLWDSSPEPVKNFPWNTTLGNFIQLVLDLTLAVVKYLAVPVFAVTCISELSYCAHQ 131

Query: 143 RKXXXXXXXXXFGVAIAGILKETALDLSPRLRDAEVPWHLIAVAIFFTMIKLPGPYYPYW 202
           RK          G A+AGILK+TAL+LSPRLRDA+VPWHLIA+AI FT+IKLPGPYYPYW
Sbjct: 132 RKLFVVPIPVLLGAAVAGILKDTALELSPRLRDAQVPWHLIAIAIVFTLIKLPGPYYPYW 191

Query: 203 GRIFIPHFANGVLLRTLWFAILWYRRPKALKMSDS 237
           GRI IPHFANGVLLR LWFAI W RRPK LKM+DS
Sbjct: 192 GRILIPHFANGVLLRALWFAIFWNRRPKVLKMTDS 226


>Medtr1g034050.1 | embryo defective 1273 protein, putative | HC |
           chr1:12319482-12317262 | 20130731
          Length = 228

 Score =  353 bits (905), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 165/215 (76%), Positives = 183/215 (85%)

Query: 23  FEPPFLGFKGTSCFVEKNNCCLGVKPFCASQKTGSKISCGMNMSAHQSDDHRKMKLEELL 82
           F+PP LGFKGTSC VEK  CCLG+KPF ASQKT  KISC MNMSAHQSDD RK++L +L+
Sbjct: 12  FQPPLLGFKGTSCSVEKRGCCLGLKPFRASQKTWPKISCAMNMSAHQSDDDRKIQLAQLI 71

Query: 83  DKARTLWDTSPEPVKNFPWNRALDNFIQLILDLTLAVVKYLSVPLFAVTSISELSYCAHE 142
           DKAR LWD+SPEPVKNFPWN  L NFIQL+LDLTLAVVKYL+VP+FAVT ISELSYCAH+
Sbjct: 72  DKARKLWDSSPEPVKNFPWNTTLGNFIQLVLDLTLAVVKYLAVPVFAVTCISELSYCAHQ 131

Query: 143 RKXXXXXXXXXFGVAIAGILKETALDLSPRLRDAEVPWHLIAVAIFFTMIKLPGPYYPYW 202
           RK          G A+AGILK+TAL+LSPRLRDA+VPWHLIA+AI FT+IKLPGPYYPYW
Sbjct: 132 RKLFVVPIPVLLGAAVAGILKDTALELSPRLRDAQVPWHLIAIAIVFTLIKLPGPYYPYW 191

Query: 203 GRIFIPHFANGVLLRTLWFAILWYRRPKALKMSDS 237
           GRI IPHFANGVLLR LWFAI W RRPK LKM+DS
Sbjct: 192 GRILIPHFANGVLLRALWFAIFWNRRPKVLKMTDS 226


>Medtr1g017160.1 | transmembrane protein, putative | HC |
           chr1:4699269-4701806 | 20130731
          Length = 226

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 3/162 (1%)

Query: 60  SCGMNMSAHQSDDHRKMKLEELLDKARTLWDTSPEPVKNFPWNRALDNFIQLILDLTLAV 119
           S   +++ H   +  K+++  + +K +   +  P PV+ FPW +A    +  +  L    
Sbjct: 46  SIKASVADHNEPNEVKIQIGIMKEKLK---EALPSPVQEFPWRKAQHTLLDRLHLLAQEA 102

Query: 120 VKYLSVPLFAVTSISELSYCAHERKXXXXXXXXXFGVAIAGILKETALDLSPRLRDAEVP 179
           +K+ SV  F  +S+S++ Y     +          GV +A  LKE +L+L  +  + ++ 
Sbjct: 103 LKWSSVVYFISSSLSDVIYTFSINRELIIPVGLFVGVLVADFLKEISLELFHQSEENDLK 162

Query: 180 WHLIAVAIFFTMIKLPGPYYPYWGRIFIPHFANGVLLRTLWF 221
           W  + +   F ++K    ++     +F+ H ANG L++ LW+
Sbjct: 163 WCRLGLCGIFVLVKFMSTWFATLPGVFLLHVANGGLMQLLWY 204