Miyakogusa Predicted Gene

Lj0g3v0334059.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334059.2 Non Characterized Hit- tr|I1KDB2|I1KDB2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56818 PE,92.73,0,no
description,NUDIX hydrolase domain; MUTT/NUDIX HYDROLASE,NULL;
NUDIX,NUDIX hydrolase domain; Nudi,CUFF.22800.2
         (220 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g054680.1 | nudix family hydrolase | HC | chr2:23355804-23...   444   e-125
Medtr4g113990.1 | nudix family hydrolase | HC | chr4:46905004-46...   357   5e-99
Medtr2g054680.2 | nudix family hydrolase | HC | chr2:23355804-23...   190   9e-49

>Medtr2g054680.1 | nudix family hydrolase | HC |
           chr2:23355804-23349026 | 20130731
          Length = 432

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/219 (95%), Positives = 215/219 (98%)

Query: 2   EAGRRKECSNESCKKRIYPRIDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPG 61
           EAG+RK+CSNESCKKRIYPR+DPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPG
Sbjct: 214 EAGKRKQCSNESCKKRIYPRVDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPG 273

Query: 62  ESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEE 121
           ESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEE
Sbjct: 274 ESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEE 333

Query: 122 LEDARWHSREDVRKALTFAEYKKAQKTAAAKVEQMCKGVEKTHSLTTDFNVESGELAPMF 181
           LEDA+WHSREDVRKALTFAEYKKAQ TAAAKVEQMCKGVEKTHSL+TDFNVESGELAPMF
Sbjct: 334 LEDAQWHSREDVRKALTFAEYKKAQTTAAAKVEQMCKGVEKTHSLSTDFNVESGELAPMF 393

Query: 182 VPGPFAIAHHLISSWAFPDQNVNGVECHSKHPSGSVSNL 220
           VPGPFAIAHHLISSWAFPDQNV G ECHSK PSGSVSNL
Sbjct: 394 VPGPFAIAHHLISSWAFPDQNVKGTECHSKQPSGSVSNL 432


>Medtr4g113990.1 | nudix family hydrolase | HC |
           chr4:46905004-46908463 | 20130731
          Length = 383

 Score =  357 bits (916), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 166/203 (81%), Positives = 182/203 (89%)

Query: 1   MEAGRRKECSNESCKKRIYPRIDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEP 60
           MEAGRRK+CSN+SCKKRIYPR+DPVVIMLVIDREND  LL  + + + R+WSCL+GF E 
Sbjct: 180 MEAGRRKQCSNDSCKKRIYPRLDPVVIMLVIDRENDSVLLGTRPKLISRLWSCLSGFTEQ 239

Query: 61  GESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKE 120
           GESLEEAVRRETWEE+GIEVGEVVYHSSQPWPVGPNS+P QLMVGFFAYAKS EI VDK+
Sbjct: 240 GESLEEAVRRETWEESGIEVGEVVYHSSQPWPVGPNSVPYQLMVGFFAYAKSREITVDKK 299

Query: 121 ELEDARWHSREDVRKALTFAEYKKAQKTAAAKVEQMCKGVEKTHSLTTDFNVESGELAPM 180
           ELEDA+W SRED+RKAL  AEYKKAQ+TAA KVEQMCKGVEK+ SL  DFNVESGELAP+
Sbjct: 300 ELEDAQWFSREDIRKALMMAEYKKAQRTAATKVEQMCKGVEKSRSLAADFNVESGELAPI 359

Query: 181 FVPGPFAIAHHLISSWAFPDQNV 203
           FVPGPFAIAHHLISSWAF DQN 
Sbjct: 360 FVPGPFAIAHHLISSWAFSDQNT 382


>Medtr2g054680.2 | nudix family hydrolase | HC |
           chr2:23355804-23349026 | 20130731
          Length = 308

 Score =  190 bits (483), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 88/91 (96%), Positives = 91/91 (100%)

Query: 2   EAGRRKECSNESCKKRIYPRIDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPG 61
           EAG+RK+CSNESCKKRIYPR+DPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPG
Sbjct: 214 EAGKRKQCSNESCKKRIYPRVDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPG 273

Query: 62  ESLEEAVRRETWEETGIEVGEVVYHSSQPWP 92
           ESLEEAVRRETWEETGIEVGEVVYHSSQPWP
Sbjct: 274 ESLEEAVRRETWEETGIEVGEVVYHSSQPWP 304