Miyakogusa Predicted Gene

Lj0g3v0334059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334059.1 Non Characterized Hit- tr|I1KDB2|I1KDB2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56818 PE,95.19,0,no
description,NUDIX hydrolase domain; MUTT/NUDIX HYDROLASE,NULL;
NUDIX,NUDIX hydrolase domain; Nudi,CUFF.22800.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g054680.1 | nudix family hydrolase | HC | chr2:23355804-23...   212   1e-55
Medtr4g113990.1 | nudix family hydrolase | HC | chr4:46905004-46...   173   6e-44
Medtr2g054680.2 | nudix family hydrolase | HC | chr2:23355804-23...   145   2e-35

>Medtr2g054680.1 | nudix family hydrolase | HC |
           chr2:23355804-23349026 | 20130731
          Length = 432

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/106 (95%), Positives = 102/106 (96%)

Query: 39  PDLMQVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE 98
           P +  VVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE
Sbjct: 232 PRVDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE 291

Query: 99  VGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDG 144
           VGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELED 
Sbjct: 292 VGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDA 337


>Medtr4g113990.1 | nudix family hydrolase | HC |
           chr4:46905004-46908463 | 20130731
          Length = 383

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 82/106 (77%), Positives = 90/106 (84%)

Query: 39  PDLMQVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE 98
           P L  VVIMLVIDREND  LL  + + + R+WSCL+GF E GESLEEAVRRETWEE+GIE
Sbjct: 199 PRLDPVVIMLVIDRENDSVLLGTRPKLISRLWSCLSGFTEQGESLEEAVRRETWEESGIE 258

Query: 99  VGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDG 144
           VGEVVYHSSQPWPVGPNS+P QLMVGFFAYAKS EI VDK+ELED 
Sbjct: 259 VGEVVYHSSQPWPVGPNSVPYQLMVGFFAYAKSREITVDKKELEDA 304


>Medtr2g054680.2 | nudix family hydrolase | HC |
           chr2:23355804-23349026 | 20130731
          Length = 308

 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/73 (94%), Positives = 70/73 (95%)

Query: 39  PDLMQVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE 98
           P +  VVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE
Sbjct: 232 PRVDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIE 291

Query: 99  VGEVVYHSSQPWP 111
           VGEVVYHSSQPWP
Sbjct: 292 VGEVVYHSSQPWP 304