Miyakogusa Predicted Gene

Lj0g3v0333699.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0333699.2 Non Characterized Hit- tr|I1LX95|I1LX95_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54598
PE,82.23,0,DUF218,Domain of unknown function DUF218; no
description,Rossmann-like alpha/beta/alpha sandwich fol,CUFF.22761.2
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g029000.1 | transmembrane protein, putative | HC | chr1:98...   562   e-160
Medtr1g029000.2 | transmembrane protein, putative | HC | chr1:98...   366   e-101

>Medtr1g029000.1 | transmembrane protein, putative | HC |
           chr1:9887989-9893526 | 20130731
          Length = 343

 Score =  562 bits (1449), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/352 (78%), Positives = 301/352 (85%), Gaps = 12/352 (3%)

Query: 1   MSNYPFGSQSLKSFHAYPRSDFDLESGIP---IKRTRKPKNSPLLNLFRMVKSFGNRFLH 57
           M+N+ F SQS KSF AYP+SDFDLES IP   IKRTRKPKNSP+ +LF+M+K    +F H
Sbjct: 1   MNNFSFTSQSYKSFPAYPKSDFDLESAIPTTTIKRTRKPKNSPIFHLFKMLK----KFHH 56

Query: 58  YFKLHPLTVVFILALSFGVTLIVFLSFRGTQLSNGSVYARVDDASGLDDYPFPKLRNLVM 117
           +FK+HP   + +L+LS G+TL VFLS+  TQL+N   YA+ D   G DDYPF KLRNLVM
Sbjct: 57  FFKIHPFVAILLLSLSLGITLFVFLSYNATQLNN---YAKTD--LGFDDYPFSKLRNLVM 111

Query: 118 VAGHSIYTSSSCGRIEKEDSWFLESYQRNPGQAATFVTHIREGVEIAAKDEAALLLFSGG 177
           VAGHS+Y SS CG+IEKEDSW+LESYQ+NPGQAATFV HI EGV I  KDE  LLLFSGG
Sbjct: 112 VAGHSVYMSSGCGKIEKEDSWYLESYQKNPGQAATFVKHIEEGVGIVDKDEEGLLLFSGG 171

Query: 178 ETRKDAGPRSEGQSYWAVADSKGWFGKEESVKWRALTEEHARDSFENLLFSVCRFRELTG 237
           ETRKDAGPRSE QSYWAVAD KGWFGKEESVKWRALTEEHARDSFENLLFSVCRFRELTG
Sbjct: 172 ETRKDAGPRSEAQSYWAVADFKGWFGKEESVKWRALTEEHARDSFENLLFSVCRFRELTG 231

Query: 238 AYPQNITVVSYDFKEERFAHLHRSAMGFPESRFFYAGTPATSNAKAAALKGEELVRTQFL 297
            YPQNITVVSYDFKE+RFA+LHRSA+GFPESRFFYAGTPATSNAK AALKGEELVR QF 
Sbjct: 232 TYPQNITVVSYDFKEDRFANLHRSAIGFPESRFFYAGTPATSNAKEAALKGEELVRAQFS 291

Query: 298 RDPYGCRGSLYHKKLKRDPFHRSIPYPNGCPEIAALFRYCGPTTYTGALPWA 349
           RDPYGCRGSLYHKKLKRDPFHRSIPYPNGCPEI  LFRYCGP  Y GALPWA
Sbjct: 292 RDPYGCRGSLYHKKLKRDPFHRSIPYPNGCPEIEPLFRYCGPAPYPGALPWA 343


>Medtr1g029000.2 | transmembrane protein, putative | HC |
           chr1:9887989-9893526 | 20130731
          Length = 247

 Score =  366 bits (940), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/253 (73%), Positives = 208/253 (82%), Gaps = 13/253 (5%)

Query: 1   MSNYPFGSQSLKSFHAYPRSDFDLESGIP---IKRTRKPKNSPLLNLFRMVKSFGNRFLH 57
           M+N+ F SQS KSF AYP+SDFDLES IP   IKRTRKPKNSP+ +LF+M+K    +F H
Sbjct: 1   MNNFSFTSQSYKSFPAYPKSDFDLESAIPTTTIKRTRKPKNSPIFHLFKMLK----KFHH 56

Query: 58  YFKLHPLTVVFILALSFGVTLIVFLSFRGTQLSNGSVYARVDDASGLDDYPFPKLRNLVM 117
           +FK+HP   + +L+LS G+TL VFLS+  TQL+N   YA+ D   G DDYPF KLRNLVM
Sbjct: 57  FFKIHPFVAILLLSLSLGITLFVFLSYNATQLNN---YAKTD--LGFDDYPFSKLRNLVM 111

Query: 118 VAGHSIYTSSSCGRIEKEDSWFLESYQRNPGQAATFVTHIREGVEIAAKDEAALLLFSGG 177
           VAGHS+Y SS CG+IEKEDSW+LESYQ+NPGQAATFV HI EGV I  KDE  LLLFSGG
Sbjct: 112 VAGHSVYMSSGCGKIEKEDSWYLESYQKNPGQAATFVKHIEEGVGIVDKDEEGLLLFSGG 171

Query: 178 ETRKDAGPRSEGQSYWAVADSKGWFGKEESVKWRALTEEHARDSFENLLFSVCRFRELTG 237
           ETRKDAGPRSE QSYWAVAD KGWFGKEESVKWRALTEEHARDSFENLLFSVCRFRELTG
Sbjct: 172 ETRKDAGPRSEAQSYWAVADFKGWFGKEESVKWRALTEEHARDSFENLLFSVCRFRELTG 231

Query: 238 AYPQNITVVSYDF 250
            YPQNIT + Y+F
Sbjct: 232 TYPQNIT-LHYEF 243