Miyakogusa Predicted Gene

Lj0g3v0333249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0333249.1 Non Characterized Hit- tr|D8U6A7|D8U6A7_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,55.26,3e-18,
,CUFF.22729.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073620.2 | Thionin related | HC | chr1:32669536-32669156 ...   245   9e-66
Medtr1g073620.1 | Thionin related | HC | chr1:32669536-32669156 ...   245   9e-66

>Medtr1g073620.2 | Thionin related | HC | chr1:32669536-32669156 |
           20130731
          Length = 126

 Score =  245 bits (625), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 119/125 (95%), Positives = 121/125 (96%)

Query: 1   MGDIWWSLLGAAIPVVVAGQAFRVKKRRAEEQRLTSARGRERSSDEIFVCERVCTSKRML 60
           MGDIWWSLLGAA+PVVVAGQAFRVKKR AEEQRL SARGRERSSDEIFVCERVCTSKRML
Sbjct: 1   MGDIWWSLLGAAVPVVVAGQAFRVKKRNAEEQRLKSARGRERSSDEIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSDLDACADACARTVCVNHHQVPNWNDICLRRCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSDLDACA+ACARTVCVN HQVPNWND CLRRCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSDLDACAEACARTVCVNQHQVPNWNDTCLRRCQSECLKL 120

Query: 121 SSQSS 125
           SSQSS
Sbjct: 121 SSQSS 125


>Medtr1g073620.1 | Thionin related | HC | chr1:32669536-32669156 |
           20130731
          Length = 126

 Score =  245 bits (625), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 119/125 (95%), Positives = 121/125 (96%)

Query: 1   MGDIWWSLLGAAIPVVVAGQAFRVKKRRAEEQRLTSARGRERSSDEIFVCERVCTSKRML 60
           MGDIWWSLLGAA+PVVVAGQAFRVKKR AEEQRL SARGRERSSDEIFVCERVCTSKRML
Sbjct: 1   MGDIWWSLLGAAVPVVVAGQAFRVKKRNAEEQRLKSARGRERSSDEIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSDLDACADACARTVCVNHHQVPNWNDICLRRCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSDLDACA+ACARTVCVN HQVPNWND CLRRCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSDLDACAEACARTVCVNQHQVPNWNDTCLRRCQSECLKL 120

Query: 121 SSQSS 125
           SSQSS
Sbjct: 121 SSQSS 125