Miyakogusa Predicted Gene
- Lj0g3v0333039.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0333039.2 Non Characterized Hit- tr|B9G5Y6|B9G5Y6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,36.36,9e-19,no
description,Six-bladed beta-propeller, TolB-like; FAMILY NOT
NAMED,NULL; seg,NULL; NHL repeat,NUL,CUFF.22709.2
(281 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g020840.1 | NHL domain protein | HC | chr7:6500793-6502288... 367 e-102
Medtr3g070770.1 | NHL domain protein | HC | chr3:31739161-317403... 309 2e-84
Medtr1g030760.1 | SMP-30/gluconolaconase/LRE-like region protein... 286 1e-77
Medtr6g021910.1 | SMP-30/gluconolaconase/LRE-like region protein... 276 2e-74
Medtr1g086990.1 | calcium-dependent phosphotriesterase superfami... 106 2e-23
>Medtr7g020840.1 | NHL domain protein | HC | chr7:6500793-6502288 |
20130731
Length = 366
Score = 367 bits (941), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/269 (71%), Positives = 215/269 (79%), Gaps = 24/269 (8%)
Query: 18 LGPSPILARSAHVINFRSPNLYPESLTWDPRAQHFLLGSYRQRTIAAVSDAGVVETFITD 77
LGPSPIL R AHVINFRSPNLYPESL WDPRAQHFL+GS R+R I AVSDAGVVETFI+D
Sbjct: 24 LGPSPILCRDAHVINFRSPNLYPESLAWDPRAQHFLIGSLRRRIITAVSDAGVVETFISD 83
Query: 78 PSLPDGASILGLAVNS---------------PPFNALAAYDLRTRDRLFLTPLPSDDDH- 121
+LP +SILG+AV+S PPFNALAAYDLR+R R+F++ L DD
Sbjct: 84 ITLPSNSSILGIAVDSRRNRLLTVVHSPPPLPPFNALAAYDLRSRRRIFISLLTDSDDES 143
Query: 122 -PAAANDVAVDHHGNAFVTNSAGNFIWKVTADGHASIFSRSPMF-SPANTPPVDGDINLL 179
P+AANDVAVDH GNA+VTNSA NFIWKVT DG ASIFS+SP+F SPAN D NLL
Sbjct: 144 TPSAANDVAVDHTGNAYVTNSAENFIWKVTTDGTASIFSKSPLFTSPAN------DNNLL 197
Query: 180 GLNGITYVSKGYLLVVQSSTGKVFKVDAFDGTARRVLLNEDLVGADDIAVRDDGVVVAVS 239
GLNGITYVSKGYLLVVQSSTGKVFKVDA DGTAR V LNE+L+GADDI VRDD VAVS
Sbjct: 198 GLNGITYVSKGYLLVVQSSTGKVFKVDAVDGTARTVSLNENLIGADDIVVRDDNAAVAVS 257
Query: 240 PVNKLWFLKSQDSWAEGVVYDQVELDLRR 268
P+NKLW +KS DSWAEGVVY++ E+D++R
Sbjct: 258 PMNKLWLMKSMDSWAEGVVYERKEIDVKR 286
>Medtr3g070770.1 | NHL domain protein | HC | chr3:31739161-31740306
| 20130731
Length = 358
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/272 (61%), Positives = 194/272 (71%), Gaps = 45/272 (16%)
Query: 18 LGPSPILARSAHVINFRSPNLYPESLTWDPRAQHFLLGSYRQRTIAAVSDAGVVETFITD 77
LGPS IL R +HVINFRSPNLYPESL WDP +ETFI+D
Sbjct: 21 LGPSSILCRDSHVINFRSPNLYPESLAWDP-----------------------LETFISD 57
Query: 78 PSLPDGASILGLAVNS---------------PPFNALAAYDLRTRDRLFLTPLPSDDD-- 120
+LP +SILGLAVNS PPFNALAAYDLR+R R+F++ LP DD
Sbjct: 58 ITLPSNSSILGLAVNSHRNRLLAIVHSPPPLPPFNALAAYDLRSRRRIFISLLPDSDDEF 117
Query: 121 ---HPAAANDVAVDHHGNAFVTNSAGNFIWKVTADGHASIFSRSPMF-SPANTPPVDGDI 176
+ +A NDVAVDH G A+V+NSAGNFIWK+T DG ASIFS+SP+F SP N G+
Sbjct: 118 TLPNLSATNDVAVDHTGTAYVSNSAGNFIWKITTDGTASIFSKSPLFTSPENNQVTTGE- 176
Query: 177 NLLGLNGITYVSKGYLLVVQSSTGKVFKVDAFDGTARRVLLNEDLVGADDIAVRDDGVVV 236
NLLGLNGITYVSKGYLLVVQSSTGKVFKVDA DGTAR V LN++L+GADDI VRDD V
Sbjct: 177 NLLGLNGITYVSKGYLLVVQSSTGKVFKVDAMDGTARTVSLNDNLIGADDIVVRDDNAAV 236
Query: 237 AVSPVNKLWFLKSQDSWAEGVVYDQVELDLRR 268
AVSP+NKLW +KS DSWAEGVVY++ E++++R
Sbjct: 237 AVSPMNKLWLMKSMDSWAEGVVYERKEINVKR 268
>Medtr1g030760.1 | SMP-30/gluconolaconase/LRE-like region protein |
HC | chr1:10750482-10748884 | 20130731
Length = 369
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/267 (57%), Positives = 188/267 (70%), Gaps = 27/267 (10%)
Query: 21 SPI---LARSAHVINFRSPNLYPESLTWDPRAQHFLLGSYRQRTIAAVSDAGVVETFITD 77
SPI LA + H+INFRS NLYPESL WD + QHFL GS RTI+++SDAG+VET I+D
Sbjct: 22 SPITKALAGTPHLINFRSQNLYPESLAWDAKNQHFLTGSLNHRTISSISDAGIVETLISD 81
Query: 78 PSLPDGASILGLAVNS---------------PPFNALAAYDLRTRDRLFLTPLPSDDDHP 122
SLP+ ++LG+ V+S PP+NALAAYDL T +RLFL+ LPS DD P
Sbjct: 82 TSLPENVTVLGITVDSLHNRVLAVIHAVHPLPPYNALAAYDLNTGNRLFLSLLPS-DDQP 140
Query: 123 AAANDVAVDHHGNAFVTNSAGNFIWKVTADGHASIFSRSPMFSPANTPPVDGD--INLLG 180
A ANDVAVD GNA+VTNS GNFIWK+ G SIFS+S F+ PVD D N G
Sbjct: 141 ALANDVAVDFKGNAYVTNSIGNFIWKINLQGEPSIFSKSARFTEN---PVDRDSPCNFCG 197
Query: 181 LNGITYVSKGYLLVVQSSTGKVFKVDAFDGTARRVLLN--EDLVGADDIAVRDDGVVVAV 238
LNGI YV+ GYLLV QS+TGK+FKVDA DGT R++LLN E+L D + +R DGVV+ V
Sbjct: 198 LNGIAYVNNGYLLVAQSNTGKIFKVDAEDGTVRQILLNNVENLTCPDGVVLRSDGVVLVV 257
Query: 239 SP-VNKLWFLKSQDSWAEGVVYDQVEL 264
SP NKLW LKS + W+EGVVYD+++L
Sbjct: 258 SPEANKLWMLKSNNGWSEGVVYDKIDL 284
>Medtr6g021910.1 | SMP-30/gluconolaconase/LRE-like region protein |
HC | chr6:7570939-7568887 | 20130731
Length = 406
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 190/275 (69%), Gaps = 27/275 (9%)
Query: 16 ILLGPSPILARSAHVINFRSPNLYPESLTWDPRAQHFLLGSYRQRTIAAVSDAGVVETFI 75
ILL SP++A HVINFRSPNLYPES+ WDP QHF++ S RTI+A+S GV++T I
Sbjct: 21 ILLQISPLIAGKPHVINFRSPNLYPESIAWDPTNQHFIVSSLHHRTISAISYTGVIKTLI 80
Query: 76 TDPSLPDGASILGLAVNS---------------PPFNALAAYDLRTRDRLFLTPLPSDD- 119
DPSLP+ +ILGL V+S PPFNALAAYDL + +RLFL+ LPS
Sbjct: 81 FDPSLPENVTILGLTVDSHNNRILAAIHALKPYPPFNALAAYDLISGNRLFLSHLPSSKP 140
Query: 120 -DHPAAANDVAVDHHGNAFVTNSAGNFIWKVTADGHASIFSRSPMFSPANTPPVDGDI-- 176
D P ANDVAVD GNA+VTNS N+IWKV +G SIFS SP F+ P VD D
Sbjct: 141 SDQP-VANDVAVDPTGNAYVTNSGDNYIWKVNTNGEPSIFSNSPKFT---EPTVDLDTPY 196
Query: 177 NLLGLNGITYVS--KGYLLVVQSSTGKVFKVDAFDGTARRVL-LNEDLVGADDIAVRDDG 233
+ GLNGI Y+S GYLLVVQS+TGK+FKVDA DGT ++ L +DL D +++R DG
Sbjct: 197 SYCGLNGIAYISNDNGYLLVVQSNTGKIFKVDADDGTTVEIVKLEKDLTCPDGVSLRTDG 256
Query: 234 VVVAVSP-VNKLWFLKSQDSWAEGVVYDQVELDLR 267
+V+ VSP VNKLWFLKS D+W EGVV+D+++LDL
Sbjct: 257 IVLVVSPEVNKLWFLKSDDAWVEGVVFDEIDLDLE 291
>Medtr1g086990.1 | calcium-dependent phosphotriesterase superfamily
protein | HC | chr1:38946873-38943792 | 20130731
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 35/253 (13%)
Query: 27 SAHVINFRSPNLYPESLTWDPRAQHFLLGSYRQRTIAAVS------DAGVV---ETFITD 77
S HV ++ S + E WD H + S+ + I +S +AG V T + +
Sbjct: 35 STHVYHYHSKGFFRECAKWDSD-NHRFINSFFEGGIGQISVPEKESEAGTVFEEATVLKE 93
Query: 78 PSLPDGASILGLAVNSPP--------------FNALAAYDLRTRDRLFLTPLPSDDDHPA 123
L AS LG+ ++ ++AL AYDL T RLFLT L D A
Sbjct: 94 TELAGNAS-LGMTIDRSRNRILVVNADVRGNRYSALVAYDLSTWKRLFLTQLSGPSDEKA 152
Query: 124 AANDVAVDHHGNAFVTNSAGNFIWKVTADGHASIFSRSPMFSPANTPPVDGDINLLGLNG 183
A+DVAVD GNA+VT+ + IWKV G+ R+P+F+P + L+GLNG
Sbjct: 153 LADDVAVDAEGNAYVTDVKASKIWKVGVGGNLISIIRNPLFTPK-----EWHKTLVGLNG 207
Query: 184 ITYVSKGYLLVVQSSTGKVFKVDAFDGTARRVL--LNEDLVGADDIAVRD-DGVVVAVSP 240
I Y G+L+V+ + +G +FK+D G +++ + L D + + + VVVA +P
Sbjct: 208 IVYHPDGFLIVIHTFSGNLFKIDLTKGEEVKIINVVGGPLYFGDGLELLSPNKVVVAGNP 267
Query: 241 VNKLWFLKSQDSW 253
+L ++S D W
Sbjct: 268 SGRL--VESLDGW 278