Miyakogusa Predicted Gene

Lj0g3v0332909.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332909.1 Non Characterized Hit- tr|D7T813|D7T813_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.91,0,1,4-ALPHA-GLUCAN-BRANCHING ENZYME (GLYCOGEN-BRANCHING
ENZYME)(BRANCHER ENZYME),NULL; ALPHA-AMYLASE,G,CUFF.22703.1
         (403 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g053220.1 | 1,4-alpha-glucan-branching enzyme/amyloplastic...   724   0.0  
Medtr3g115340.1 | starch branching enzyme I | HC | chr3:53939913...   304   8e-83
Medtr3g115340.2 | starch branching enzyme I | HC | chr3:53939913...   304   1e-82
Medtr3g115340.3 | starch branching enzyme I | HC | chr3:53939913...   295   5e-80
Medtr7g104080.1 | starch branching enzyme I | HC | chr7:42120840...   291   7e-79
Medtr7g104080.2 | starch branching enzyme I | HC | chr7:42120617...   291   8e-79
Medtr7g104080.3 | starch branching enzyme I | HC | chr7:42120931...   238   6e-63

>Medtr3g053220.1 | 1,4-alpha-glucan-branching enzyme/amyloplastic
           protein | HC | chr3:21141021-21130771 | 20130731
          Length = 918

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/401 (85%), Positives = 370/401 (92%)

Query: 1   MVGLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQF 60
           MVGLSMFDGSNDC+FHSGKRGQHKFWGTRMFKYGD DVLHFLLSNLNWWV EYQIDGFQF
Sbjct: 503 MVGLSMFDGSNDCFFHSGKRGQHKFWGTRMFKYGDLDVLHFLLSNLNWWVEEYQIDGFQF 562

Query: 61  HSISSMIYTHNGFASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYY 120
           HS+SSMIYTHNGFASFTGDLEEY NQYVDKDALLYLI+AN+ILH  +PNIVTIAEDA+YY
Sbjct: 563 HSLSSMIYTHNGFASFTGDLEEYSNQYVDKDALLYLIMANEILHVLHPNIVTIAEDATYY 622

Query: 121 PGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMY 180
           PGLCEPT QGGLGFDYYVNLS  EMWSTFLE+VPDHEWSMTKIVNTLIS ++YA+KML+Y
Sbjct: 623 PGLCEPTSQGGLGFDYYVNLSAPEMWSTFLETVPDHEWSMTKIVNTLISKREYANKMLLY 682

Query: 181 AENHNQSISGRRSFAEILFGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRAYLNFMG 240
           AENHNQSISGRRSFAE LFGEIDEHS+ YKESLLRGSSLHKMIRLITL IGGRAY+NFMG
Sbjct: 683 AENHNQSISGRRSFAEALFGEIDEHSEDYKESLLRGSSLHKMIRLITLTIGGRAYMNFMG 742

Query: 241 NEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGVYRDLFTFDKDMMKLDENARVLSRGF 300
           NEFGHPK VEFP+ SND S+ LANRQWDLL KDG++ DLFTFDKDMMKLDE  RVLSR F
Sbjct: 743 NEFGHPKSVEFPSPSNDFSYSLANRQWDLLEKDGIHCDLFTFDKDMMKLDEKERVLSRAF 802

Query: 301 PNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEAGEYQIILNTDDIKYAGQG 360
           P  HHVND+SMVISY+RGPLLFIFNFHPT+SYDSY+VGV+EAGEYQ+ILNTD+IKYAGQG
Sbjct: 803 PTFHHVNDSSMVISYVRGPLLFIFNFHPTDSYDSYAVGVEEAGEYQLILNTDEIKYAGQG 862

Query: 361 SLKEDQYYKKTISRRVDGLRNCLVVSLPSRTAQVYKLKRIL 401
            LKEDQY+++TISRRVDG RNC+ V LPSRTAQV  L  +L
Sbjct: 863 ILKEDQYFQRTISRRVDGHRNCIEVQLPSRTAQVNSLLPLL 903


>Medtr3g115340.1 | starch branching enzyme I | HC |
           chr3:53939913-53932569 | 20130731
          Length = 815

 Score =  304 bits (779), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 162/410 (39%), Positives = 246/410 (60%), Gaps = 19/410 (4%)

Query: 3   GLSMFD---GSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQ 59
           GL+ FD    S + YFH+G RG HK W +R+F Y + +VL FLLSNL WW+ E++ DGF+
Sbjct: 361 GLNGFDVGQSSQESYFHTGGRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLDEFKFDGFR 420

Query: 60  FHSISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDAS 118
           F  ++SM+Y H+G   +FTGD  EY ++  D DA++YL+LAN ++H   P+   IAED S
Sbjct: 421 FDGVTSMLYHHHGINMAFTGDYNEYFSESTDVDAVVYLMLANCLVHNILPDATVIAEDVS 480

Query: 119 YYPGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKML 178
             PGL  P F+ G+GFDY + +++ + W  ++++  D+EWSM +I + L +N+ Y +K +
Sbjct: 481 GMPGLGRPVFEAGIGFDYRLAMAIPDKWIDYVKNKKDYEWSMKEISSNL-TNRRYTEKCV 539

Query: 179 MYAENHNQSISGRRSFAEILFGEIDEHS----DHYKESLLRGSSLHKMIRLITLAIGGRA 234
            YAE+H+QSI G ++ A +L  E    S         ++ RG +LHK+I  +T+A+GG  
Sbjct: 540 AYAESHDQSIVGDKTIAFLLMDEEMYSSMSCLTDASPTIDRGIALHKIIHFLTMALGGEG 599

Query: 235 YLNFMGNEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGV-YRDLFTFDKDMMKLDENA 293
           YLNFMGNEFGHP+ ++FP   N  S+    RQW+L+  D + Y+ +  FD+ M  LD+  
Sbjct: 600 YLNFMGNEFGHPEWIDFPREGNGWSYEKCRRQWNLVDTDHLRYKFMNAFDRAMNMLDDKF 659

Query: 294 RVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEAGEYQIILNTDD 353
             L+     +   N+   VI + RG L+F+FNFHP N+Y  Y +G D  G+Y++ L++D 
Sbjct: 660 SFLASTKQIVSSTNNEDKVIVFERGDLVFVFNFHPENTYKGYKIGCDLPGKYRVALDSDA 719

Query: 354 IKYAGQGSLKEDQYYKKTISRRVDGL--------RNCLVVSLPSRTAQVY 395
            ++ G G +  D  +  T    + G+         N   V  P RT  VY
Sbjct: 720 REFGGHGRVGHDADH-FTSPEGIPGVPETNFNNRPNSFKVLSPPRTCVVY 768


>Medtr3g115340.2 | starch branching enzyme I | HC |
           chr3:53939913-53932581 | 20130731
          Length = 744

 Score =  304 bits (779), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 162/410 (39%), Positives = 246/410 (60%), Gaps = 19/410 (4%)

Query: 3   GLSMFD---GSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQ 59
           GL+ FD    S + YFH+G RG HK W +R+F Y + +VL FLLSNL WW+ E++ DGF+
Sbjct: 290 GLNGFDVGQSSQESYFHTGGRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLDEFKFDGFR 349

Query: 60  FHSISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDAS 118
           F  ++SM+Y H+G   +FTGD  EY ++  D DA++YL+LAN ++H   P+   IAED S
Sbjct: 350 FDGVTSMLYHHHGINMAFTGDYNEYFSESTDVDAVVYLMLANCLVHNILPDATVIAEDVS 409

Query: 119 YYPGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKML 178
             PGL  P F+ G+GFDY + +++ + W  ++++  D+EWSM +I + L +N+ Y +K +
Sbjct: 410 GMPGLGRPVFEAGIGFDYRLAMAIPDKWIDYVKNKKDYEWSMKEISSNL-TNRRYTEKCV 468

Query: 179 MYAENHNQSISGRRSFAEILFGEIDEHS----DHYKESLLRGSSLHKMIRLITLAIGGRA 234
            YAE+H+QSI G ++ A +L  E    S         ++ RG +LHK+I  +T+A+GG  
Sbjct: 469 AYAESHDQSIVGDKTIAFLLMDEEMYSSMSCLTDASPTIDRGIALHKIIHFLTMALGGEG 528

Query: 235 YLNFMGNEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGV-YRDLFTFDKDMMKLDENA 293
           YLNFMGNEFGHP+ ++FP   N  S+    RQW+L+  D + Y+ +  FD+ M  LD+  
Sbjct: 529 YLNFMGNEFGHPEWIDFPREGNGWSYEKCRRQWNLVDTDHLRYKFMNAFDRAMNMLDDKF 588

Query: 294 RVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEAGEYQIILNTDD 353
             L+     +   N+   VI + RG L+F+FNFHP N+Y  Y +G D  G+Y++ L++D 
Sbjct: 589 SFLASTKQIVSSTNNEDKVIVFERGDLVFVFNFHPENTYKGYKIGCDLPGKYRVALDSDA 648

Query: 354 IKYAGQGSLKEDQYYKKTISRRVDGL--------RNCLVVSLPSRTAQVY 395
            ++ G G +  D  +  T    + G+         N   V  P RT  VY
Sbjct: 649 REFGGHGRVGHDADH-FTSPEGIPGVPETNFNNRPNSFKVLSPPRTCVVY 697


>Medtr3g115340.3 | starch branching enzyme I | HC |
           chr3:53939913-53932581 | 20130731
          Length = 828

 Score =  295 bits (755), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 162/423 (38%), Positives = 246/423 (58%), Gaps = 32/423 (7%)

Query: 3   GLSMFD---GSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQ 59
           GL+ FD    S + YFH+G RG HK W +R+F Y + +VL FLLSNL WW+ E++ DGF+
Sbjct: 361 GLNGFDVGQSSQESYFHTGGRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLDEFKFDGFR 420

Query: 60  FHSISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDAS 118
           F  ++SM+Y H+G   +FTGD  EY ++  D DA++YL+LAN ++H   P+   IAED S
Sbjct: 421 FDGVTSMLYHHHGINMAFTGDYNEYFSESTDVDAVVYLMLANCLVHNILPDATVIAEDVS 480

Query: 119 YYPGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKML 178
             PGL  P F+ G+GFDY + +++ + W  ++++  D+EWSM +I + L +N+ Y +K +
Sbjct: 481 GMPGLGRPVFEAGIGFDYRLAMAIPDKWIDYVKNKKDYEWSMKEISSNL-TNRRYTEKCV 539

Query: 179 MYAENHNQSISGRRSFAEILFGEIDEHS----DHYKESLLRGSSLHK------------- 221
            YAE+H+QSI G ++ A +L  E    S         ++ RG +LHK             
Sbjct: 540 AYAESHDQSIVGDKTIAFLLMDEEMYSSMSCLTDASPTIDRGIALHKVFIRPLNILDYIH 599

Query: 222 MIRLITLAIGGRAYLNFMGNEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGV-YRDLF 280
           +I  +T+A+GG  YLNFMGNEFGHP+ ++FP   N  S+    RQW+L+  D + Y+ + 
Sbjct: 600 IIHFLTMALGGEGYLNFMGNEFGHPEWIDFPREGNGWSYEKCRRQWNLVDTDHLRYKFMN 659

Query: 281 TFDKDMMKLDENARVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVD 340
            FD+ M  LD+    L+     +   N+   VI + RG L+F+FNFHP N+Y  Y +G D
Sbjct: 660 AFDRAMNMLDDKFSFLASTKQIVSSTNNEDKVIVFERGDLVFVFNFHPENTYKGYKIGCD 719

Query: 341 EAGEYQIILNTDDIKYAGQGSLKEDQYYKKTISRRVDGL--------RNCLVVSLPSRTA 392
             G+Y++ L++D  ++ G G +  D  +  T    + G+         N   V  P RT 
Sbjct: 720 LPGKYRVALDSDAREFGGHGRVGHDADH-FTSPEGIPGVPETNFNNRPNSFKVLSPPRTC 778

Query: 393 QVY 395
            VY
Sbjct: 779 VVY 781


>Medtr7g104080.1 | starch branching enzyme I | HC |
           chr7:42120840-42096216 | 20130731
          Length = 877

 Score =  291 bits (745), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 167/415 (40%), Positives = 245/415 (59%), Gaps = 26/415 (6%)

Query: 3   GLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQFHS 62
           GL+MFDG++  YFHSG RG H  W +R+F YG  +VL +LLSN  WW+ EY+ DGF+F  
Sbjct: 441 GLNMFDGTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDG 500

Query: 63  ISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYYP 121
           ++SM+YTH+G   SFTG+  EY     D +A++YL+L ND++H  YP  V+I ED S  P
Sbjct: 501 VTSMMYTHHGLQVSFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLYPEAVSIGEDVSGMP 560

Query: 122 GLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMYA 181
             C PT  GG+GF+Y ++++V++ W   L+   D +W M  IV+TL +N+ + +  ++YA
Sbjct: 561 TFCLPTQDGGIGFNYRLHMAVADKWIDLLKK-KDEDWRMGDIVHTL-TNRRWLENCVVYA 618

Query: 182 ENHNQSISGRRSFAEIL-------FGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRA 234
           E+H+Q++ G ++ A  L       F  +D  S      + RG +LHKMIRLIT+ +GG  
Sbjct: 619 ESHDQALVGDKTLAFWLMDKDMYDFMALDRPS---TPLIDRGIALHKMIRLITMGLGGEG 675

Query: 235 YLNFMGNEFGHPKRVEFP-----------TSSNDNSFLLANRQWDLLAKDGV-YRDLFTF 282
           YLNFMGNEFGHP+ ++FP              N+NS+    R++DL   + + Y  +  F
Sbjct: 676 YLNFMGNEFGHPEWIDFPRGDQHLPNGTVVPGNNNSYDKCRRRFDLGDAEYLRYHGMQEF 735

Query: 283 DKDMMKLDENARVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEA 342
           D+ M  L+E    +      I   N+   VI + R  L+F+FNFH TNSY  Y VG  + 
Sbjct: 736 DRAMQHLEERYGFMISEHQYISRKNEGDRVIIFERDNLVFVFNFHWTNSYSDYKVGCLKP 795

Query: 343 GEYQIILNTDDIKYAGQGSLKEDQYYKKTISRRVDGLRNCLVVSLPSRTAQVYKL 397
           G+Y+I+L++D+  + G   L     Y  +     D  R+ LV + P RTA VY L
Sbjct: 796 GKYKIVLDSDESLFGGFNRLNHTAEYFTSEGWYDDRPRSFLVYA-PCRTAVVYAL 849


>Medtr7g104080.2 | starch branching enzyme I | HC |
           chr7:42120617-42096216 | 20130731
          Length = 874

 Score =  291 bits (745), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 167/415 (40%), Positives = 245/415 (59%), Gaps = 26/415 (6%)

Query: 3   GLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQFHS 62
           GL+MFDG++  YFHSG RG H  W +R+F YG  +VL +LLSN  WW+ EY+ DGF+F  
Sbjct: 438 GLNMFDGTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDG 497

Query: 63  ISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYYP 121
           ++SM+YTH+G   SFTG+  EY     D +A++YL+L ND++H  YP  V+I ED S  P
Sbjct: 498 VTSMMYTHHGLQVSFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLYPEAVSIGEDVSGMP 557

Query: 122 GLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMYA 181
             C PT  GG+GF+Y ++++V++ W   L+   D +W M  IV+TL +N+ + +  ++YA
Sbjct: 558 TFCLPTQDGGIGFNYRLHMAVADKWIDLLKK-KDEDWRMGDIVHTL-TNRRWLENCVVYA 615

Query: 182 ENHNQSISGRRSFAEIL-------FGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRA 234
           E+H+Q++ G ++ A  L       F  +D  S      + RG +LHKMIRLIT+ +GG  
Sbjct: 616 ESHDQALVGDKTLAFWLMDKDMYDFMALDRPS---TPLIDRGIALHKMIRLITMGLGGEG 672

Query: 235 YLNFMGNEFGHPKRVEFP-----------TSSNDNSFLLANRQWDLLAKDGV-YRDLFTF 282
           YLNFMGNEFGHP+ ++FP              N+NS+    R++DL   + + Y  +  F
Sbjct: 673 YLNFMGNEFGHPEWIDFPRGDQHLPNGTVVPGNNNSYDKCRRRFDLGDAEYLRYHGMQEF 732

Query: 283 DKDMMKLDENARVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEA 342
           D+ M  L+E    +      I   N+   VI + R  L+F+FNFH TNSY  Y VG  + 
Sbjct: 733 DRAMQHLEERYGFMISEHQYISRKNEGDRVIIFERDNLVFVFNFHWTNSYSDYKVGCLKP 792

Query: 343 GEYQIILNTDDIKYAGQGSLKEDQYYKKTISRRVDGLRNCLVVSLPSRTAQVYKL 397
           G+Y+I+L++D+  + G   L     Y  +     D  R+ LV + P RTA VY L
Sbjct: 793 GKYKIVLDSDESLFGGFNRLNHTAEYFTSEGWYDDRPRSFLVYA-PCRTAVVYAL 846


>Medtr7g104080.3 | starch branching enzyme I | HC |
           chr7:42120931-42098239 | 20130731
          Length = 722

 Score =  238 bits (608), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 124/286 (43%), Positives = 181/286 (63%), Gaps = 24/286 (8%)

Query: 3   GLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQFHS 62
           GL+MFDG++  YFHSG RG H  W +R+F YG  +VL +LLSN  WW+ EY+ DGF+F  
Sbjct: 441 GLNMFDGTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDG 500

Query: 63  ISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYYP 121
           ++SM+YTH+G   SFTG+  EY     D +A++YL+L ND++H  YP  V+I ED S  P
Sbjct: 501 VTSMMYTHHGLQVSFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLYPEAVSIGEDVSGMP 560

Query: 122 GLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMYA 181
             C PT  GG+GF+Y ++++V++ W   L+   D +W M  IV+TL +N+ + +  ++YA
Sbjct: 561 TFCLPTQDGGIGFNYRLHMAVADKWIDLLKK-KDEDWRMGDIVHTL-TNRRWLENCVVYA 618

Query: 182 ENHNQSISGRRSFAEIL-------FGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRA 234
           E+H+Q++ G ++ A  L       F  +D  S      + RG +LHKMIRLIT+ +GG  
Sbjct: 619 ESHDQALVGDKTLAFWLMDKDMYDFMALDRPS---TPLIDRGIALHKMIRLITMGLGGEG 675

Query: 235 YLNFMGNEFGHPKRVEFP-----------TSSNDNSFLLANRQWDL 269
           YLNFMGNEFGHP+ ++FP              N+NS+    R++DL
Sbjct: 676 YLNFMGNEFGHPEWIDFPRGDQHLPNGTVVPGNNNSYDKCRRRFDL 721