Miyakogusa Predicted Gene

Lj0g3v0332629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332629.1 Non Characterized Hit- tr|I1MEF2|I1MEF2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.86,0,DUF382,Domain
of unknown function DUF382; PSP,PSP, proline-rich; seg,NULL; SUBFAMILY
NOT NAMED,NULL;,CUFF.22686.1
         (559 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g089085.1 | splicing factor 3B subunit 2 | HC | chr4:35697...   705   0.0  
Medtr2g013350.1 | splicing factor 3B subunit 2 | HC | chr2:35769...   704   0.0  
Medtr2g013350.2 | splicing factor 3B subunit 2 | HC | chr2:35774...   677   0.0  
Medtr2g013350.3 | splicing factor 3B subunit 2 | HC | chr2:35775...   663   0.0  
Medtr2g072100.1 | hypothetical protein | HC | chr2:30238972-3023...    73   7e-13

>Medtr4g089085.1 | splicing factor 3B subunit 2 | HC |
           chr4:35697993-35706063 | 20130731
          Length = 579

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/562 (67%), Positives = 414/562 (73%), Gaps = 32/562 (5%)

Query: 1   MMTETLPHQNS-------NSSTATVKSEQRR------RKQKKINKASQEARPKTAKDNN- 46
           M  ETL HQN         S TATVK  +        RKQKKINKAS+E     ++D+  
Sbjct: 1   MAAETLVHQNGVVSNGDLGSKTATVKKSRESDRRRRRRKQKKINKASKEQNANASEDDTD 60

Query: 47  --ENTDPKQVAEQ----VEYVWEKSELDEGMDEQFRRIIEKFSF--IAGSEDTYKNXXXX 98
             ENT+ +Q        +EYV EK+EL EG+DE+F++I EKFSF  +  SED  K     
Sbjct: 61  AKENTEQQQQQVVEQVEIEYVPEKAELYEGLDEEFKKIFEKFSFSEVIDSEDNDKKDESA 120

Query: 99  XXXXXXXXX----XXXNDXXXXXXXXXXXXXXXLQQRMKIAQLKQICSRPDVVEVWDATA 154
                            D               LQ+RMKIA+LKQI +RPDVVEVWDAT+
Sbjct: 121 ENAITKKKADSDSEEEEDDNEQKEKGVSNKKKKLQRRMKIAELKQISARPDVVEVWDATS 180

Query: 155 LDPKLLVFFKSYRNTVPVPRHWSQKRNFLQGKRGIQKQPFQLPHFIAATGIEKIRQAYID 214
            DPKLLVF KSYRNTVPVPRHW QKR FLQGKRGI+KQPFQLP FIAATGIEKIRQAYI+
Sbjct: 181 ADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIE 240

Query: 215 KEDGKKLKQKQRERMQPKMGKMDIDYRVLHDAFFKYQTKPKLTSLGELYHEGREFEVKLR 274
           KED KKLKQKQRERMQPKMGKMDIDY+VLHDAFFKYQTKPKL+SLG+LYHEG+EFEVKLR
Sbjct: 241 KEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSSLGDLYHEGKEFEVKLR 300

Query: 275 EMKPGMLSHELKEALGMPEGAPSPWLINMQRYGPPPSYPSLKIPGLNSPIPPGASFGYHA 334
           EMKPGMLSHELKEALGMPEG+P PWLINMQRYGPPPSYPSLKIPGLN+PIPPGASFGYH 
Sbjct: 301 EMKPGMLSHELKEALGMPEGSPPPWLINMQRYGPPPSYPSLKIPGLNAPIPPGASFGYHP 360

Query: 335 GGWGKPPVDEYGRALYGDVFGVQQQEHPNYEEEPVDKTKHWGDLXXXXXXXXXXXXXXXX 394
           GGWGKPPVDE+GR LYGDVFGV QQ+ PNYEEEPVDKTKHWGDL                
Sbjct: 361 GGWGKPPVDEFGRPLYGDVFGVHQQDQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEE 420

Query: 395 XXXXXXXXXXXAGIQSVDSISSAPTGVETPDVIDLRKQQRKEPKEPVRPLYLVLEEKEEK 454
                       G QSVDS+SS PTGVETPDVIDLRKQQRKEP+   RPLY VLEEKEEK
Sbjct: 421 EEDIEEEALED-GSQSVDSMSSTPTGVETPDVIDLRKQQRKEPE---RPLYQVLEEKEEK 476

Query: 455 IAPGTFLGTTHTYAVGTGGTQDKSGAKRVDLLKGQKSDKVDVTIQPEELETMDNDALHAK 514
           +APGT LGTTHTY VGT GTQDKSGAKRVDLLKGQK+D+VDVT+ PEEL+ M+N  L  +
Sbjct: 477 LAPGTLLGTTHTYVVGT-GTQDKSGAKRVDLLKGQKTDRVDVTLLPEELDIMEN-VLPGR 534

Query: 515 YVEAREEENSRSHHEDFSQMVA 536
           Y EAREEE  RS  EDFS MVA
Sbjct: 535 YEEAREEEKLRSQREDFSDMVA 556


>Medtr2g013350.1 | splicing factor 3B subunit 2 | HC |
           chr2:3576901-3585046 | 20130731
          Length = 578

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/551 (68%), Positives = 416/551 (75%), Gaps = 18/551 (3%)

Query: 1   MMTETLPHQNSNSSTATVKSEQRRR--KQKKINKASQEARPKTAKDNN---ENTDPKQVA 55
           M  ET P+QN   +  + ++++RRR  K KK NKAS++      ++++   ENTDPKQV 
Sbjct: 1   MAAETFPYQNGVVAKKSKENDRRRRRGKAKKNNKASEQPASNIGEESDNAKENTDPKQVF 60

Query: 56  EQVE--YVWEKSELDEGMDEQFRRIIEKFSF--IAGSEDTYKNXXXXXXXXXXXXXXXXN 111
           EQVE  YV EK +L EGMDE+FR+I EKFSF  +A SE+T K                 +
Sbjct: 61  EQVEIEYVPEKVDLYEGMDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDS 120

Query: 112 D------XXXXXXXXXXXXXXXLQQRMKIAQLKQICSRPDVVEVWDATALDPKLLVFFKS 165
           D                     LQ+RMKIA+LKQ+ SRPDVVEVWDATA DPKLLVF KS
Sbjct: 121 DYEDEENDNEQKEKGVSNKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKS 180

Query: 166 YRNTVPVPRHWSQKRNFLQGKRGIQKQPFQLPHFIAATGIEKIRQAYIDKEDGKKLKQKQ 225
           YRNTVPVPRHWSQKR FLQGKRGI+KQPFQLP FIAATGIEKIRQAYI+KED KKLKQKQ
Sbjct: 181 YRNTVPVPRHWSQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQ 240

Query: 226 RERMQPKMGKMDIDYRVLHDAFFKYQTKPKLTSLGELYHEGREFEVKLREMKPGMLSHEL 285
           RERMQPKMGKMDIDY+VLHDAFFKYQTKPKLTSLGELYHEG+EFEVKLREMKPGMLSH+L
Sbjct: 241 RERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHDL 300

Query: 286 KEALGMPEGAPSPWLINMQRYGPPPSYPSLKIPGLNSPIPPGASFGYHAGGWGKPPVDEY 345
           KEALGMPEGAP PWLINMQRYGPPPSYP LKIPGLN+PIP GASFGYH GGWGKPPVDEY
Sbjct: 301 KEALGMPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPAGASFGYHPGGWGKPPVDEY 360

Query: 346 GRALYGDVFGVQQQEHPNYEEEPVDKTKHWGDLXXXXXXXXXXXXXXXXXXXXXXXXXXX 405
           GR LYGDVFGVQQQ+ PNYEEEPVDKTKHWGDL                           
Sbjct: 361 GRPLYGDVFGVQQQDQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEEGMEEEYFE 420

Query: 406 AGIQSVDSISSAPTGVETPDVIDLRKQQRKEPKEPVRPLYLVLEEKEEKIAPGTFLGTTH 465
            G++SVDS+SS PTGVETPDVIDLRKQQR   KEP RPLY VLEEKEEKI  G+ L   H
Sbjct: 421 DGVKSVDSLSSTPTGVETPDVIDLRKQQRN--KEPERPLYQVLEEKEEKIGAGSLLVPGH 478

Query: 466 TYAVGTGGTQDKSGAKRVDLLKGQKSDKVDVTIQPEELETMDNDALHAKYVEAREEENSR 525
           TY VGTGGTQDKSGAKRVDLLKGQKSDKVDVT+ PEELE M+N  L A+Y EAREEE  R
Sbjct: 479 TYVVGTGGTQDKSGAKRVDLLKGQKSDKVDVTLLPEELEAMEN-VLQARYEEAREEEKLR 537

Query: 526 SHHEDFSQMVA 536
           S  EDFS MVA
Sbjct: 538 SQREDFSDMVA 548


>Medtr2g013350.2 | splicing factor 3B subunit 2 | HC |
           chr2:3577473-3584784 | 20130731
          Length = 523

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/488 (72%), Positives = 378/488 (77%), Gaps = 11/488 (2%)

Query: 57  QVEYVWEKSELDEGMDEQFRRIIEKFSF--IAGSEDTYKNXXXXXXXXXXXXXXXXND-- 112
           ++EYV EK +L EGMDE+FR+I EKFSF  +A SE+T K                 +D  
Sbjct: 9   EIEYVPEKVDLYEGMDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYE 68

Query: 113 ----XXXXXXXXXXXXXXXLQQRMKIAQLKQICSRPDVVEVWDATALDPKLLVFFKSYRN 168
                              LQ+RMKIA+LKQ+ SRPDVVEVWDATA DPKLLVF KSYRN
Sbjct: 69  DEENDNEQKEKGVSNKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRN 128

Query: 169 TVPVPRHWSQKRNFLQGKRGIQKQPFQLPHFIAATGIEKIRQAYIDKEDGKKLKQKQRER 228
           TVPVPRHWSQKR FLQGKRGI+KQPFQLP FIAATGIEKIRQAYI+KED KKLKQKQRER
Sbjct: 129 TVPVPRHWSQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRER 188

Query: 229 MQPKMGKMDIDYRVLHDAFFKYQTKPKLTSLGELYHEGREFEVKLREMKPGMLSHELKEA 288
           MQPKMGKMDIDY+VLHDAFFKYQTKPKLTSLGELYHEG+EFEVKLREMKPGMLSH+LKEA
Sbjct: 189 MQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHDLKEA 248

Query: 289 LGMPEGAPSPWLINMQRYGPPPSYPSLKIPGLNSPIPPGASFGYHAGGWGKPPVDEYGRA 348
           LGMPEGAP PWLINMQRYGPPPSYP LKIPGLN+PIP GASFGYH GGWGKPPVDEYGR 
Sbjct: 249 LGMPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPAGASFGYHPGGWGKPPVDEYGRP 308

Query: 349 LYGDVFGVQQQEHPNYEEEPVDKTKHWGDLXXXXXXXXXXXXXXXXXXXXXXXXXXXAGI 408
           LYGDVFGVQQQ+ PNYEEEPVDKTKHWGDL                            G+
Sbjct: 309 LYGDVFGVQQQDQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEEGMEEEYFEDGV 368

Query: 409 QSVDSISSAPTGVETPDVIDLRKQQRKEPKEPVRPLYLVLEEKEEKIAPGTFLGTTHTYA 468
           +SVDS+SS PTGVETPDVIDLRKQQR   KEP RPLY VLEEKEEKI  G+ L   HTY 
Sbjct: 369 KSVDSLSSTPTGVETPDVIDLRKQQRN--KEPERPLYQVLEEKEEKIGAGSLLVPGHTYV 426

Query: 469 VGTGGTQDKSGAKRVDLLKGQKSDKVDVTIQPEELETMDNDALHAKYVEAREEENSRSHH 528
           VGTGGTQDKSGAKRVDLLKGQKSDKVDVT+ PEELE M+N  L A+Y EAREEE  RS  
Sbjct: 427 VGTGGTQDKSGAKRVDLLKGQKSDKVDVTLLPEELEAMEN-VLQARYEEAREEEKLRSQR 485

Query: 529 EDFSQMVA 536
           EDFS MVA
Sbjct: 486 EDFSDMVA 493


>Medtr2g013350.3 | splicing factor 3B subunit 2 | HC |
           chr2:3577560-3585046 | 20130731
          Length = 501

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/474 (72%), Positives = 367/474 (77%), Gaps = 11/474 (2%)

Query: 71  MDEQFRRIIEKFSF--IAGSEDTYKNXXXXXXXXXXXXXXXXND------XXXXXXXXXX 122
           MDE+FR+I EKFSF  +A SE+T K                 +D                
Sbjct: 1   MDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVS 60

Query: 123 XXXXXLQQRMKIAQLKQICSRPDVVEVWDATALDPKLLVFFKSYRNTVPVPRHWSQKRNF 182
                LQ+RMKIA+LKQ+ SRPDVVEVWDATA DPKLLVF KSYRNTVPVPRHWSQKR F
Sbjct: 61  NKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKF 120

Query: 183 LQGKRGIQKQPFQLPHFIAATGIEKIRQAYIDKEDGKKLKQKQRERMQPKMGKMDIDYRV 242
           LQGKRGI+KQPFQLP FIAATGIEKIRQAYI+KED KKLKQKQRERMQPKMGKMDIDY+V
Sbjct: 121 LQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQV 180

Query: 243 LHDAFFKYQTKPKLTSLGELYHEGREFEVKLREMKPGMLSHELKEALGMPEGAPSPWLIN 302
           LHDAFFKYQTKPKLTSLGELYHEG+EFEVKLREMKPGMLSH+LKEALGMPEGAP PWLIN
Sbjct: 181 LHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHDLKEALGMPEGAPPPWLIN 240

Query: 303 MQRYGPPPSYPSLKIPGLNSPIPPGASFGYHAGGWGKPPVDEYGRALYGDVFGVQQQEHP 362
           MQRYGPPPSYP LKIPGLN+PIP GASFGYH GGWGKPPVDEYGR LYGDVFGVQQQ+ P
Sbjct: 241 MQRYGPPPSYPQLKIPGLNAPIPAGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQDQP 300

Query: 363 NYEEEPVDKTKHWGDLXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIQSVDSISSAPTGVE 422
           NYEEEPVDKTKHWGDL                            G++SVDS+SS PTGVE
Sbjct: 301 NYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEEGMEEEYFEDGVKSVDSLSSTPTGVE 360

Query: 423 TPDVIDLRKQQRKEPKEPVRPLYLVLEEKEEKIAPGTFLGTTHTYAVGTGGTQDKSGAKR 482
           TPDVIDLRKQQR   KEP RPLY VLEEKEEKI  G+ L   HTY VGTGGTQDKSGAKR
Sbjct: 361 TPDVIDLRKQQRN--KEPERPLYQVLEEKEEKIGAGSLLVPGHTYVVGTGGTQDKSGAKR 418

Query: 483 VDLLKGQKSDKVDVTIQPEELETMDNDALHAKYVEAREEENSRSHHEDFSQMVA 536
           VDLLKGQKSDKVDVT+ PEELE M+N  L A+Y EAREEE  RS  EDFS MVA
Sbjct: 419 VDLLKGQKSDKVDVTLLPEELEAMEN-VLQARYEEAREEEKLRSQREDFSDMVA 471


>Medtr2g072100.1 | hypothetical protein | HC |
           chr2:30238972-30237083 | 20130731
          Length = 240

 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 9/102 (8%)

Query: 1   MMTETLPHQNSNSSTATVKSEQRRR--KQKKINKASQEARPKTAKDNN---ENTDPKQVA 55
           M  ET P+QN   +  + ++++RRR  K KK NKAS++      +D++   ENTDPKQV 
Sbjct: 1   MAAETFPYQNGVVAKKSKENDRRRRRGKAKKNNKASEQPASNIGEDSDNAKENTDPKQVF 60

Query: 56  EQVE--YVWEKSELDEGMDEQFRRIIEKFSF--IAGSEDTYK 93
           EQVE  YV EK +L EGMDE+FR+I EKFSF  +A SE+T K
Sbjct: 61  EQVEIEYVPEKVDLYEGMDEEFRKIFEKFSFTDVAASEETDK 102