Miyakogusa Predicted Gene

Lj0g3v0332319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332319.1 Non Characterized Hit- tr|D8R1T4|D8R1T4_SELML
Putative uncharacterized protein OS=Selaginella moelle,49.02,3e-17,
,CUFF.22653.1
         (101 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g037570.1 | hypothetical protein | HC | chr1:13905344-1390...   170   3e-43
Medtr1g037570.2 | hypothetical protein | HC | chr1:13905401-1390...   169   6e-43
Medtr4g075120.1 | hypothetical protein | HC | chr4:28671033-2867...   155   7e-39

>Medtr1g037570.1 | hypothetical protein | HC |
           chr1:13905344-13908404 | 20130731
          Length = 401

 Score =  170 bits (430), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 91/98 (92%)

Query: 1   MLPNVMVCPYDFPLTENNMRVYIPNILYGNAEVNVKSFSRFWFKNGVSRNSESKVPTLNT 60
           +LPNVM+CPYDFPLTENN+RVY+PNI++G+AEV ++ F  FWFK+GVS+N+ S VPTL +
Sbjct: 299 VLPNVMICPYDFPLTENNIRVYVPNIMFGDAEVKMRRFGSFWFKSGVSKNNMSDVPTLKS 358

Query: 61  VVLVATRALQDEELLLNYRLSNSKRRPEWYAPLDEEED 98
           +VLVATRA+QDEELLLNYRLSN+KRRPEWYAP+DEEED
Sbjct: 359 LVLVATRAIQDEELLLNYRLSNTKRRPEWYAPVDEEED 396


>Medtr1g037570.2 | hypothetical protein | HC |
           chr1:13905401-13908403 | 20130731
          Length = 313

 Score =  169 bits (427), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 91/98 (92%)

Query: 1   MLPNVMVCPYDFPLTENNMRVYIPNILYGNAEVNVKSFSRFWFKNGVSRNSESKVPTLNT 60
           +LPNVM+CPYDFPLTENN+RVY+PNI++G+AEV ++ F  FWFK+GVS+N+ S VPTL +
Sbjct: 211 VLPNVMICPYDFPLTENNIRVYVPNIMFGDAEVKMRRFGSFWFKSGVSKNNMSDVPTLKS 270

Query: 61  VVLVATRALQDEELLLNYRLSNSKRRPEWYAPLDEEED 98
           +VLVATRA+QDEELLLNYRLSN+KRRPEWYAP+DEEED
Sbjct: 271 LVLVATRAIQDEELLLNYRLSNTKRRPEWYAPVDEEED 308


>Medtr4g075120.1 | hypothetical protein | HC |
           chr4:28671033-28675408 | 20130731
          Length = 371

 Score =  155 bits (392), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 84/99 (84%), Gaps = 2/99 (2%)

Query: 1   MLPNVMVCPYDFPLTENNMRVYIPNILYGNA-EVNVKSFSRFWFKNGVSRNSESKVPT-L 58
           MLPNVM+CPYDFPL EN+MR YIPN+L+GNA E N + F  FWFK+ V RN+ES VPT L
Sbjct: 269 MLPNVMICPYDFPLIENDMRAYIPNVLFGNAAEENTERFGSFWFKSRVPRNNESHVPTTL 328

Query: 59  NTVVLVATRALQDEELLLNYRLSNSKRRPEWYAPLDEEE 97
            TVVLVATRALQDEELLLNYRL N+KR PEWYAP+DEEE
Sbjct: 329 KTVVLVATRALQDEELLLNYRLGNTKRCPEWYAPVDEEE 367