Miyakogusa Predicted Gene

Lj0g3v0332299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332299.1 Non Characterized Hit- tr|D8S8I5|D8S8I5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,44.44,0.000000000000005,OS02G0126500 PROTEIN,NULL; FAMILY NOT
NAMED,NULL,CUFF.22656.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g021740.1 | PPR containing plant-like protein | HC | chr6:...   162   7e-41

>Medtr6g021740.1 | PPR containing plant-like protein | HC |
           chr6:7478019-7487121 | 20130731
          Length = 444

 Score =  162 bits (409), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 85/102 (83%)

Query: 1   MNGYTEKGMQIAQDTLVTMNERQFFLNSKYGSELLLIAAGEKTGGYTTANYIWDLMRARN 60
           M GYTEKGMQI+ D L  MNER FF+NSK GSELL++AAGEKTGGYT ANYIWDLMRARN
Sbjct: 342 MVGYTEKGMQISIDILTRMNERNFFMNSKMGSELLIMAAGEKTGGYTNANYIWDLMRARN 401

Query: 61  IVPAFAAVERYYQGLKDREIPQDDPRLVLVCRTLDNFRMRNR 102
           I P+ AAVE YYQGLKDR+IPQDDPRL+LV +  DN R R R
Sbjct: 402 IYPSLAAVEAYYQGLKDRQIPQDDPRLMLVTQMYDNLRSRFR 443