Miyakogusa Predicted Gene

Lj0g3v0331879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0331879.1 Non Characterized Hit- tr|J3MX08|J3MX08_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,50.77,0.00000000000001,seg,NULL,CUFF.22618.1
         (426 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087360.1 | transmembrane protein, putative | HC | chr3:39...   376   e-104
Medtr8g090265.1 | transmembrane protein, putative | HC | chr8:37...   318   5e-87

>Medtr3g087360.1 | transmembrane protein, putative | HC |
           chr3:39614574-39612564 | 20130731
          Length = 447

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 177/240 (73%), Positives = 197/240 (82%)

Query: 187 WMFEDEDSDLVSDFKDLPIRFQKSLIPDLERISTTSKSYFTRANKEFTKGFKPYVGNKYA 246
           W F++ED D VSDFKDLPI+FQ++LIPDLE+ISTTSK+Y T+ANKE TK FKPYVGNKYA
Sbjct: 208 WFFDEEDMDFVSDFKDLPIKFQQTLIPDLEKISTTSKAYITKANKEITKNFKPYVGNKYA 267

Query: 247 PTIATLLSCAFVXXXXXXXXXXXNKIKAYFSLQKLLLFIQAYLSIYFSILCLSSFVTGLE 306
           PTIATLLSCA V           NKIKAYFSLQKLL+FIQAYLSIYFSILC SS +TGLE
Sbjct: 268 PTIATLLSCACVLIPLLLASLLFNKIKAYFSLQKLLIFIQAYLSIYFSILCFSSLITGLE 327

Query: 307 PLRFFFSTSQSSYLFLQVIQTXXXXXXXXXXXXXXXXXFSTDSGLGSKFLGLTQTFVGFA 366
           PL+FF+STSQS+YL LQ+IQT                 FSTD GLGSK LGL Q FVGF+
Sbjct: 328 PLKFFYSTSQSTYLILQIIQTLAYFLYLMMLLMYLVLVFSTDCGLGSKLLGLAQMFVGFS 387

Query: 367 VGLHYYMTVFHRVVLRQPPKTNWKVHGIYATCFFVICVLAGADRRKKSYLEEGGEEGKKN 426
           VGLHYYMTVFH+VVLRQPPKTNWK+HGIYATCFF+ICVLA A+RRKK+YLEEGGEEGKKN
Sbjct: 388 VGLHYYMTVFHKVVLRQPPKTNWKIHGIYATCFFMICVLARAERRKKTYLEEGGEEGKKN 447


>Medtr8g090265.1 | transmembrane protein, putative | HC |
           chr8:37918929-37917048 | 20130731
          Length = 476

 Score =  318 bits (816), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 146/230 (63%), Positives = 178/230 (77%)

Query: 197 VSDFKDLPIRFQKSLIPDLERISTTSKSYFTRANKEFTKGFKPYVGNKYAPTIATLLSCA 256
           +S+FKDLP RF ++L+PDLERISTTSK+Y T AN + TKGFKPYVG KYAPTIATL+S  
Sbjct: 247 LSEFKDLPNRFHRTLLPDLERISTTSKAYITEANYQMTKGFKPYVGKKYAPTIATLVSSI 306

Query: 257 FVXXXXXXXXXXXNKIKAYFSLQKLLLFIQAYLSIYFSILCLSSFVTGLEPLRFFFSTSQ 316
           FV           NKIK YFSLQK+L+FIQ YLS+YF+ LC+S+ +TG+EPL+F F+TSQ
Sbjct: 307 FVLIPLLLVSLLCNKIKTYFSLQKILIFIQIYLSLYFTTLCISTLITGVEPLKFLFTTSQ 366

Query: 317 SSYLFLQVIQTXXXXXXXXXXXXXXXXXFSTDSGLGSKFLGLTQTFVGFAVGLHYYMTVF 376
           S+Y+  QV+QT                 FST+ GLGSKFL L Q FVGF++GLHYY+TVF
Sbjct: 367 STYICFQVLQTLGYVFYLLLLVMYLVLVFSTECGLGSKFLSLGQIFVGFSIGLHYYVTVF 426

Query: 377 HRVVLRQPPKTNWKVHGIYATCFFVICVLAGADRRKKSYLEEGGEEGKKN 426
           H+VVLRQPPK+NWK+HGIYATCF +IC+ AGADRRKK+Y+E  GEEGKKN
Sbjct: 427 HKVVLRQPPKSNWKIHGIYATCFLLICLFAGADRRKKAYVENDGEEGKKN 476