Miyakogusa Predicted Gene

Lj0g3v0331489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0331489.1 Non Characterized Hit- tr|B9GAQ2|B9GAQ2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,75.86,2e-17,Thymidylate synthase/dCMP
hydroxymethylase,Thymidylate synthase/dCMP hydroxymethylase domain;
thym_s,gene.g25872.t1.1
         (207 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g015630.1 | dihydrofolate reductase-thymidylate synthase-l...   377   e-105
Medtr6g015630.4 | dihydrofolate reductase-thymidylate synthase-l...   377   e-105
Medtr6g015630.2 | dihydrofolate reductase-thymidylate synthase-l...   377   e-105
Medtr3g117080.1 | dihydrofolate reductase-thymidylate synthase-l...   377   e-105
Medtr6g015630.3 | dihydrofolate reductase-thymidylate synthase-l...   376   e-104
Medtr4g070670.1 | dihydrofolate reductase-thymidylate synthase-l...   375   e-104
Medtr3g117080.2 | dihydrofolate reductase-thymidylate synthase-l...   249   1e-66

>Medtr6g015630.1 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319702-5315138 | 20130731
          Length = 525

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 184/197 (93%)

Query: 11  FYYSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRR 70
           F  SIGL+EREEGDLGPVYGFQWRHFGA+Y++MH DY+ QG DQLLDVINKIKHNP+DRR
Sbjct: 329 FLDSIGLSEREEGDLGPVYGFQWRHFGAKYTNMHGDYANQGLDQLLDVINKIKHNPDDRR 388

Query: 71  IILSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 130
           IILSAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLTCM
Sbjct: 389 IILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 448

Query: 131 IAHVCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADF 190
           IAH+CELVPGDF+H IGDAHVY  HVRPLQEQL NLPKPFPTLKIN +KKDIDSFVA DF
Sbjct: 449 IAHICELVPGDFIHAIGDAHVYQTHVRPLQEQLHNLPKPFPTLKINPKKKDIDSFVATDF 508

Query: 191 KLVGYNPHQKIEMKMAV 207
           KL+ Y+PHQKIEMKMAV
Sbjct: 509 KLIDYDPHQKIEMKMAV 525


>Medtr6g015630.4 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319938-5314483 | 20130731
          Length = 525

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 184/197 (93%)

Query: 11  FYYSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRR 70
           F  SIGL+EREEGDLGPVYGFQWRHFGA+Y++MH DY+ QG DQLLDVINKIKHNP+DRR
Sbjct: 329 FLDSIGLSEREEGDLGPVYGFQWRHFGAKYTNMHGDYANQGLDQLLDVINKIKHNPDDRR 388

Query: 71  IILSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 130
           IILSAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLTCM
Sbjct: 389 IILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 448

Query: 131 IAHVCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADF 190
           IAH+CELVPGDF+H IGDAHVY  HVRPLQEQL NLPKPFPTLKIN +KKDIDSFVA DF
Sbjct: 449 IAHICELVPGDFIHAIGDAHVYQTHVRPLQEQLHNLPKPFPTLKINPKKKDIDSFVATDF 508

Query: 191 KLVGYNPHQKIEMKMAV 207
           KL+ Y+PHQKIEMKMAV
Sbjct: 509 KLIDYDPHQKIEMKMAV 525


>Medtr6g015630.2 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319938-5314483 | 20130731
          Length = 525

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 184/197 (93%)

Query: 11  FYYSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRR 70
           F  SIGL+EREEGDLGPVYGFQWRHFGA+Y++MH DY+ QG DQLLDVINKIKHNP+DRR
Sbjct: 329 FLDSIGLSEREEGDLGPVYGFQWRHFGAKYTNMHGDYANQGLDQLLDVINKIKHNPDDRR 388

Query: 71  IILSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 130
           IILSAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLTCM
Sbjct: 389 IILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 448

Query: 131 IAHVCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADF 190
           IAH+CELVPGDF+H IGDAHVY  HVRPLQEQL NLPKPFPTLKIN +KKDIDSFVA DF
Sbjct: 449 IAHICELVPGDFIHAIGDAHVYQTHVRPLQEQLHNLPKPFPTLKINPKKKDIDSFVATDF 508

Query: 191 KLVGYNPHQKIEMKMAV 207
           KL+ Y+PHQKIEMKMAV
Sbjct: 509 KLIDYDPHQKIEMKMAV 525


>Medtr3g117080.1 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr3:54761987-54756466 | 20130731
          Length = 569

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 184/197 (93%)

Query: 11  FYYSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRR 70
           F  SIGL+EREEGDLGPVYGFQWRHFGA+Y++MH DY+ QG DQLLDVINKIKHNP+DRR
Sbjct: 373 FLDSIGLSEREEGDLGPVYGFQWRHFGAKYTNMHGDYANQGLDQLLDVINKIKHNPDDRR 432

Query: 71  IILSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 130
           IILSAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLTCM
Sbjct: 433 IILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 492

Query: 131 IAHVCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADF 190
           IAH+CELVPGDF+H IGDAHVY  HVRPLQEQL NLPKPFPTLKIN +KKDIDSFVA DF
Sbjct: 493 IAHICELVPGDFIHAIGDAHVYQTHVRPLQEQLHNLPKPFPTLKINPKKKDIDSFVATDF 552

Query: 191 KLVGYNPHQKIEMKMAV 207
           KL+ Y+PHQKIEMKMAV
Sbjct: 553 KLIDYDPHQKIEMKMAV 569


>Medtr6g015630.3 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319938-5314483 | 20130731
          Length = 561

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 184/197 (93%)

Query: 11  FYYSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRR 70
           F  SIGL+EREEGDLGPVYGFQWRHFGA+Y++MH DY+ QG DQLLDVINKIKHNP+DRR
Sbjct: 365 FLDSIGLSEREEGDLGPVYGFQWRHFGAKYTNMHGDYANQGLDQLLDVINKIKHNPDDRR 424

Query: 71  IILSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 130
           IILSAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLTCM
Sbjct: 425 IILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 484

Query: 131 IAHVCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADF 190
           IAH+CELVPGDF+H IGDAHVY  HVRPLQEQL NLPKPFPTLKIN +KKDIDSFVA DF
Sbjct: 485 IAHICELVPGDFIHAIGDAHVYQTHVRPLQEQLHNLPKPFPTLKINPKKKDIDSFVATDF 544

Query: 191 KLVGYNPHQKIEMKMAV 207
           KL+ Y+PHQKIEMKMAV
Sbjct: 545 KLIDYDPHQKIEMKMAV 561


>Medtr4g070670.1 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr4:26618056-26613509 | 20130731
          Length = 528

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 173/194 (89%), Positives = 184/194 (94%)

Query: 14  SIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRRIIL 73
           SIGL EREE DLGPVYGFQWRHFGARY++MH DYSGQG+DQLLDVINKIKHNP+DRRIIL
Sbjct: 335 SIGLKEREEADLGPVYGFQWRHFGARYTNMHDDYSGQGFDQLLDVINKIKHNPDDRRIIL 394

Query: 74  SAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAH 133
           SAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLT MIAH
Sbjct: 395 SAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTYMIAH 454

Query: 134 VCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADFKLV 193
           VC+LVPGD +HVIGDAHVY NHV+PLQEQL NLPKPFP LKIN +KKDIDSFVAADFKL+
Sbjct: 455 VCDLVPGDLIHVIGDAHVYRNHVKPLQEQLQNLPKPFPILKINPKKKDIDSFVAADFKLI 514

Query: 194 GYNPHQKIEMKMAV 207
           GY+PHQKIEMKMAV
Sbjct: 515 GYDPHQKIEMKMAV 528


>Medtr3g117080.2 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr3:54760289-54757389 | 20130731
          Length = 491

 Score =  249 bits (636), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 112/127 (88%), Positives = 120/127 (94%)

Query: 11  FYYSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRR 70
           F  SIGL+EREEGDLGPVYGFQWRHFGA+Y++MH DY+ QG DQLLDVINKIKHNP+DRR
Sbjct: 365 FLDSIGLSEREEGDLGPVYGFQWRHFGAKYTNMHGDYANQGLDQLLDVINKIKHNPDDRR 424

Query: 71  IILSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 130
           IILSAWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASYALLTCM
Sbjct: 425 IILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCM 484

Query: 131 IAHVCEL 137
           IAH+C L
Sbjct: 485 IAHICGL 491