Miyakogusa Predicted Gene

Lj0g3v0331419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0331419.1 Non Characterized Hit- tr|G4U6J5|G4U6J5_NEUT9
Putative uncharacterized protein OS=Neurospora
tetrasp,40.24,3e-17,ADP-RIBOSE PYROPHOSPHATASE,NULL; UDP/ADP-SUGAR
PYROPHOSPHATASE,NULL; no description,NUDIX hydrolase ,CUFF.22580.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g101830.1 | nudix hydrolase-like protein | HC | chr4:42130...   304   5e-83
Medtr4g101830.2 | nudix hydrolase-like protein | HC | chr4:42130...   246   2e-65

>Medtr4g101830.1 | nudix hydrolase-like protein | HC |
           chr4:42130854-42126342 | 20130731
          Length = 307

 Score =  304 bits (779), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 158/197 (80%), Positives = 168/197 (85%), Gaps = 5/197 (2%)

Query: 1   MAVSVRTVSAALKKFVPTHAFHRISTKKVFG--CKMS--TESPPFTHSITLPSKQSEPFH 56
           MAV+VRT+SAALK   P HA + I  KK  G   KMS  TESP  THSITLPSKQSEP H
Sbjct: 1   MAVTVRTISAALKNLKPFHAPNLIPKKKKNGFFYKMSSSTESPSLTHSITLPSKQSEPVH 60

Query: 57  IVAAPGVSHSDFWNAIDSSLFKQWLHNLQTENGILADGTMTLRQVLIQGVDMFGKRIGFL 116
           I+AAPGVS SDFW+AIDSSLFKQWLHNLQTENGILA+ TMTLRQVLIQGVDMFGKRIGFL
Sbjct: 61  ILAAPGVSSSDFWSAIDSSLFKQWLHNLQTENGILANDTMTLRQVLIQGVDMFGKRIGFL 120

Query: 117 KFQADIFDKETGQKV-CIVFARGPAVAVLILLESEGETYVVLTDQPRVPVGKTILELPAG 175
           KF A+I DKETG KV  IVFARGPAVA+LILLESEGETY VLT+Q RVPVG+ ILELPAG
Sbjct: 121 KFIAEIIDKETGNKVPGIVFARGPAVAMLILLESEGETYAVLTEQARVPVGRIILELPAG 180

Query: 176 MLDDDKGDFVGTAVREV 192
           MLDDDKGD VGTAVREV
Sbjct: 181 MLDDDKGDIVGTAVREV 197


>Medtr4g101830.2 | nudix hydrolase-like protein | HC |
           chr4:42130854-42126342 | 20130731
          Length = 281

 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/196 (68%), Positives = 144/196 (73%), Gaps = 29/196 (14%)

Query: 1   MAVSVRTVSAALKKFVPTHAFHRISTKKVFG--CKMS--TESPPFTHSITLPSKQSEPFH 56
           MAV+VRT+SAALK   P HA + I  KK  G   KMS  TESP  THSITLPSKQSEP H
Sbjct: 1   MAVTVRTISAALKNLKPFHAPNLIPKKKKNGFFYKMSSSTESPSLTHSITLPSKQSEPVH 60

Query: 57  IVAAPGVSHSDFWNAIDSSLFKQWLHNLQTENGILADGTMTLRQVLIQGVDMFGKRIGFL 116
           I+AAPGVS SDFW+AIDSSLFKQWLHNLQTENGILA+ TMTLRQVLIQ            
Sbjct: 61  ILAAPGVSSSDFWSAIDSSLFKQWLHNLQTENGILANDTMTLRQVLIQ------------ 108

Query: 117 KFQADIFDKETGQKVCIVFARGPAVAVLILLESEGETYVVLTDQPRVPVGKTILELPAGM 176
                           IVFARGPAVA+LILLESEGETY VLT+Q RVPVG+ ILELPAGM
Sbjct: 109 -------------VPGIVFARGPAVAMLILLESEGETYAVLTEQARVPVGRIILELPAGM 155

Query: 177 LDDDKGDFVGTAVREV 192
           LDDDKGD VGTAVREV
Sbjct: 156 LDDDKGDIVGTAVREV 171