Miyakogusa Predicted Gene
- Lj0g3v0330849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0330849.1 Non Characterized Hit- tr|G7J254|G7J254_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.51,0.000000000000009,seg,NULL;
coiled-coil,NULL,CUFF.22538.1
(291 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g056730.1 | hypothetical protein | HC | chr3:22780985-2277... 101 8e-22
Medtr3g057160.1 | hypothetical protein | LC | chr3:22838931-2283... 76 3e-14
Medtr3g057330.1 | hypothetical protein | HC | chr3:22852973-2285... 72 5e-13
Medtr3g057030.1 | hypothetical protein | LC | chr3:22828489-2282... 63 3e-10
Medtr3g056755.1 | hypothetical protein | LC | chr3:22797263-2279... 61 1e-09
Medtr8g016620.1 | hypothetical protein | LC | chr8:5620701-56210... 59 4e-09
Medtr5g095370.1 | hypothetical protein | LC | chr5:41687576-4168... 50 2e-06
>Medtr3g056730.1 | hypothetical protein | HC |
chr3:22780985-22773432 | 20130731
Length = 573
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 68/91 (74%)
Query: 13 PLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAKLKAEIEEQRKEI 72
P G DWR+ L+RM+ISEL+ ELRD+F +SDFD VEETL+AREA LK EI+E+ EI
Sbjct: 9 PFFGPDDWRNRSNLNRMTISELVSELRDTFIQSDFDVVEETLIAREAALKGEIDEKNNEI 68
Query: 73 VLLQERYHLEKLDKINAQLELKMVMREKGKG 103
LL+E++ + L+K++ ++ELK V EKG G
Sbjct: 69 KLLEEKFDMLMLEKVSVEMELKRVKEEKGNG 99
>Medtr3g057160.1 | hypothetical protein | LC |
chr3:22838931-22835661 | 20130731
Length = 210
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 3/120 (2%)
Query: 1 MDRVPRTANGSGPLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAK 60
M+ P GS LSG DWR + MSIS+LI +LRD+F + DFD VEETL+AREA
Sbjct: 1 MENQPEIRTGSVKLSGPNDWRSRRNMQNMSISKLISKLRDTFIQRDFDAVEETLVAREAM 60
Query: 61 LKAEIEEQRKEIVLLQERYHLEKLDKINAQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
LK EI+E++K+I L ++++ +E+ DKI+ ++ELK V E+ K N +G VK +LG
Sbjct: 61 LKTEIKEKKKKIELFEKKFQMERSDKISVEMELKRVKEERYK---NELVKNGGVVKGKLG 117
>Medtr3g057330.1 | hypothetical protein | HC |
chr3:22852973-22852449 | 20130731
Length = 174
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 9/119 (7%)
Query: 1 MDRVPRTANGSGPLSGSGD-WRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREA 59
M++ P GS L G D WR+ L MSISEL+ ELRD+F +SDFD VEE L++REA
Sbjct: 1 MEQRPEIQTGSVKLLGPDDDWRNRSNLQNMSISELVSELRDTFIQSDFDVVEEALVSREA 60
Query: 60 KLKAEIEEQRKEIVLLQERYHLEKLDKINAQLELKMVMREKGK-------GVVNG-FGF 110
LKAEI+E++KE+ LL+E++ +E+L+K++ +ELK V E+ K GVV G GF
Sbjct: 61 MLKAEIKEKKKELKLLEEKFQMERLEKVSVDMELKRVKEERCKKELVKNCGVVKGELGF 119
>Medtr3g057030.1 | hypothetical protein | LC |
chr3:22828489-22828070 | 20130731
Length = 139
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 12/116 (10%)
Query: 5 PRTANGSGPLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAKLKAE 64
P+ GS SG DWR+ + MSISE I +LRD+F + DFD VEETL++REA K E
Sbjct: 13 PKIRTGSLKHSGPNDWRNQSNMQNMSISEFISKLRDTFIQRDFDVVEETLVSREAMFKTE 72
Query: 65 IEEQRKEIVLLQERYHLEKLDKINAQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
I+E++K+I L DK+ ++ELK V K K N +G VK++LG
Sbjct: 73 IKEKKKKIEL---------SDKVIVEIELKRV---KEKRYKNELMKNGGVVKEKLG 116
>Medtr3g056755.1 | hypothetical protein | LC |
chr3:22797263-22795638 | 20130731
Length = 160
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 26 LSRMSISELIFELRDSFRKSDFDRVEETLLAREAKLKAEIEEQRKEIVLLQERYHLEKLD 85
+ MSISE I +LRD+F + +FD VEETL+AREA K +I+E++K+I L ++++ +++ D
Sbjct: 1 MQNMSISEFISKLRDTFIQRNFDDVEETLIAREAMFKTKIKEKKKQIELFEKKFQMKRSD 60
Query: 86 KINAQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
K++ ++ELK V E+ K N +G VK++LG
Sbjct: 61 KVSVEIELKRVKEERYK---NELVKNGGVVKEKLG 92
>Medtr8g016620.1 | hypothetical protein | LC | chr8:5620701-5621039
| 20130731
Length = 112
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 29 MSISELIFELRDSFRKSDFDRVEETLLAREAKLKAEIEEQRKEIVLLQERYHLEKLDKIN 88
MSISE I +LRD+F + +FD VEETL+AREA K +I+E++K+I L ++++ +++ DK++
Sbjct: 1 MSISEFISKLRDTFIQRNFDDVEETLIAREAMFKTKIKEKKKQIELFEKKFQMKRSDKVS 60
Query: 89 AQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
++ELK V E+ K N +G VK++LG
Sbjct: 61 VEIELKRVKEERYK---NELVKNGGVVKEKLG 89
>Medtr5g095370.1 | hypothetical protein | LC |
chr5:41687576-41688341 | 20130731
Length = 225
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 1 MDRVPRTANGSGPLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAK 60
M+ P+T G LS S D L MSI EL+ LR SF DFD VEE L+ R+ K
Sbjct: 1 MEHQPKTEPG---LSSS----DHRNLEDMSIHELVSVLRTSFLTEDFDNVEEVLVTRDKK 53
Query: 61 LKAEIEEQRKEIVLLQERYHLEKLDKINAQ 90
L+ +I+ LQE++ +EKL + +
Sbjct: 54 LQT-------KILHLQEKFEMEKLTRFQVE 76