Miyakogusa Predicted Gene

Lj0g3v0330849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0330849.1 Non Characterized Hit- tr|G7J254|G7J254_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.51,0.000000000000009,seg,NULL;
coiled-coil,NULL,CUFF.22538.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g056730.1 | hypothetical protein | HC | chr3:22780985-2277...   101   8e-22
Medtr3g057160.1 | hypothetical protein | LC | chr3:22838931-2283...    76   3e-14
Medtr3g057330.1 | hypothetical protein | HC | chr3:22852973-2285...    72   5e-13
Medtr3g057030.1 | hypothetical protein | LC | chr3:22828489-2282...    63   3e-10
Medtr3g056755.1 | hypothetical protein | LC | chr3:22797263-2279...    61   1e-09
Medtr8g016620.1 | hypothetical protein | LC | chr8:5620701-56210...    59   4e-09
Medtr5g095370.1 | hypothetical protein | LC | chr5:41687576-4168...    50   2e-06

>Medtr3g056730.1 | hypothetical protein | HC |
           chr3:22780985-22773432 | 20130731
          Length = 573

 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 68/91 (74%)

Query: 13  PLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAKLKAEIEEQRKEI 72
           P  G  DWR+   L+RM+ISEL+ ELRD+F +SDFD VEETL+AREA LK EI+E+  EI
Sbjct: 9   PFFGPDDWRNRSNLNRMTISELVSELRDTFIQSDFDVVEETLIAREAALKGEIDEKNNEI 68

Query: 73  VLLQERYHLEKLDKINAQLELKMVMREKGKG 103
            LL+E++ +  L+K++ ++ELK V  EKG G
Sbjct: 69  KLLEEKFDMLMLEKVSVEMELKRVKEEKGNG 99


>Medtr3g057160.1 | hypothetical protein | LC |
           chr3:22838931-22835661 | 20130731
          Length = 210

 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 3/120 (2%)

Query: 1   MDRVPRTANGSGPLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAK 60
           M+  P    GS  LSG  DWR    +  MSIS+LI +LRD+F + DFD VEETL+AREA 
Sbjct: 1   MENQPEIRTGSVKLSGPNDWRSRRNMQNMSISKLISKLRDTFIQRDFDAVEETLVAREAM 60

Query: 61  LKAEIEEQRKEIVLLQERYHLEKLDKINAQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
           LK EI+E++K+I L ++++ +E+ DKI+ ++ELK V  E+ K   N    +G  VK +LG
Sbjct: 61  LKTEIKEKKKKIELFEKKFQMERSDKISVEMELKRVKEERYK---NELVKNGGVVKGKLG 117


>Medtr3g057330.1 | hypothetical protein | HC |
           chr3:22852973-22852449 | 20130731
          Length = 174

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 9/119 (7%)

Query: 1   MDRVPRTANGSGPLSGSGD-WRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREA 59
           M++ P    GS  L G  D WR+   L  MSISEL+ ELRD+F +SDFD VEE L++REA
Sbjct: 1   MEQRPEIQTGSVKLLGPDDDWRNRSNLQNMSISELVSELRDTFIQSDFDVVEEALVSREA 60

Query: 60  KLKAEIEEQRKEIVLLQERYHLEKLDKINAQLELKMVMREKGK-------GVVNG-FGF 110
            LKAEI+E++KE+ LL+E++ +E+L+K++  +ELK V  E+ K       GVV G  GF
Sbjct: 61  MLKAEIKEKKKELKLLEEKFQMERLEKVSVDMELKRVKEERCKKELVKNCGVVKGELGF 119


>Medtr3g057030.1 | hypothetical protein | LC |
           chr3:22828489-22828070 | 20130731
          Length = 139

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 12/116 (10%)

Query: 5   PRTANGSGPLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAKLKAE 64
           P+   GS   SG  DWR+   +  MSISE I +LRD+F + DFD VEETL++REA  K E
Sbjct: 13  PKIRTGSLKHSGPNDWRNQSNMQNMSISEFISKLRDTFIQRDFDVVEETLVSREAMFKTE 72

Query: 65  IEEQRKEIVLLQERYHLEKLDKINAQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
           I+E++K+I L          DK+  ++ELK V   K K   N    +G  VK++LG
Sbjct: 73  IKEKKKKIEL---------SDKVIVEIELKRV---KEKRYKNELMKNGGVVKEKLG 116


>Medtr3g056755.1 | hypothetical protein | LC |
           chr3:22797263-22795638 | 20130731
          Length = 160

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 67/95 (70%), Gaps = 3/95 (3%)

Query: 26  LSRMSISELIFELRDSFRKSDFDRVEETLLAREAKLKAEIEEQRKEIVLLQERYHLEKLD 85
           +  MSISE I +LRD+F + +FD VEETL+AREA  K +I+E++K+I L ++++ +++ D
Sbjct: 1   MQNMSISEFISKLRDTFIQRNFDDVEETLIAREAMFKTKIKEKKKQIELFEKKFQMKRSD 60

Query: 86  KINAQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
           K++ ++ELK V  E+ K   N    +G  VK++LG
Sbjct: 61  KVSVEIELKRVKEERYK---NELVKNGGVVKEKLG 92


>Medtr8g016620.1 | hypothetical protein | LC | chr8:5620701-5621039
           | 20130731
          Length = 112

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 3/92 (3%)

Query: 29  MSISELIFELRDSFRKSDFDRVEETLLAREAKLKAEIEEQRKEIVLLQERYHLEKLDKIN 88
           MSISE I +LRD+F + +FD VEETL+AREA  K +I+E++K+I L ++++ +++ DK++
Sbjct: 1   MSISEFISKLRDTFIQRNFDDVEETLIAREAMFKTKIKEKKKQIELFEKKFQMKRSDKVS 60

Query: 89  AQLELKMVMREKGKGVVNGFGFDGTNVKDELG 120
            ++ELK V  E+ K   N    +G  VK++LG
Sbjct: 61  VEIELKRVKEERYK---NELVKNGGVVKEKLG 89


>Medtr5g095370.1 | hypothetical protein | LC |
          chr5:41687576-41688341 | 20130731
          Length = 225

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 14/90 (15%)

Query: 1  MDRVPRTANGSGPLSGSGDWRDPEKLSRMSISELIFELRDSFRKSDFDRVEETLLAREAK 60
          M+  P+T  G   LS S    D   L  MSI EL+  LR SF   DFD VEE L+ R+ K
Sbjct: 1  MEHQPKTEPG---LSSS----DHRNLEDMSIHELVSVLRTSFLTEDFDNVEEVLVTRDKK 53

Query: 61 LKAEIEEQRKEIVLLQERYHLEKLDKINAQ 90
          L+        +I+ LQE++ +EKL +   +
Sbjct: 54 LQT-------KILHLQEKFEMEKLTRFQVE 76