Miyakogusa Predicted Gene

Lj0g3v0330149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0330149.1 tr|O24327|O24327_RICCO Orf protein OS=Ricinus
communis GN=orf PE=2 SV=1,84.62,1e-18,MBF1,Multiprotein bridging
factor 1, N-terminal; ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1
(MULTI,CUFF.22493.1
         (65 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084220.1 | multiprotein bridging factor 1b-like protein |...   110   4e-25
Medtr4g080090.1 | multiprotein bridging factor 1b-like protein |...    96   7e-21
Medtr6g018330.1 | multiprotein bridging factor 1b-like protein |...    72   1e-13
Medtr6g086280.2 | multiprotein bridging factor 1b-like protein |...    62   9e-11
Medtr6g086280.1 | multiprotein bridging factor 1b-like protein |...    62   9e-11
Medtr4g103930.1 | multiprotein bridging factor 1 | LC | chr4:429...    57   4e-09

>Medtr2g084220.1 | multiprotein bridging factor 1b-like protein |
          HC | chr2:35379970-35375982 | 20130731
          Length = 140

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 5  GPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSSTSFNT 64
          GP+SQDWEPVVLRKKAPTAAA+KD+KAVNAARR+GADIET+KK NA TNKAASSSTS NT
Sbjct: 3  GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETMKKHNAATNKAASSSTSLNT 62

Query: 65 K 65
          K
Sbjct: 63 K 63


>Medtr4g080090.1 | multiprotein bridging factor 1b-like protein |
          HC | chr4:31042066-31045251 | 20130731
          Length = 142

 Score = 96.3 bits (238), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 60/65 (92%)

Query: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSST 60
          MSG+G +SQDWEPVV+RKKAP AAAKKDEKAVNAARR+GADI+TVKK NA TNKAASSST
Sbjct: 1  MSGLGHISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGADIDTVKKHNAATNKAASSST 60

Query: 61 SFNTK 65
          S NTK
Sbjct: 61 SLNTK 65


>Medtr6g018330.1 | multiprotein bridging factor 1b-like protein |
          HC | chr6:7016019-7016567 | 20130731
          Length = 143

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 41/47 (87%)

Query: 2  SGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKF 48
          +G+ P SQDWEPVVLRKKA TAAA+KD+K VNAAR +GADI+T+KK 
Sbjct: 19 TGIRPGSQDWEPVVLRKKAHTAAARKDDKVVNAARGAGADIKTMKKM 65


>Medtr6g086280.2 | multiprotein bridging factor 1b-like protein |
          HC | chr6:32389995-32393233 | 20130731
          Length = 149

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 41/62 (66%)

Query: 4  VGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSSTSFN 63
          VG + QDWEPVVL K  P A   ++ KAVN A R+GA++ TVKK  AG+NK A++    N
Sbjct: 9  VGTIKQDWEPVVLHKTKPKAQDLRNPKAVNQALRTGAEVLTVKKPTAGSNKKATAGPVLN 68

Query: 64 TK 65
           +
Sbjct: 69 AR 70


>Medtr6g086280.1 | multiprotein bridging factor 1b-like protein |
          HC | chr6:32390058-32393143 | 20130731
          Length = 151

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 41/62 (66%)

Query: 4  VGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSSTSFN 63
          VG + QDWEPVVL K  P A   ++ KAVN A R+GA++ TVKK  AG+NK A++    N
Sbjct: 9  VGTIKQDWEPVVLHKTKPKAQDLRNPKAVNQALRTGAEVLTVKKPTAGSNKKATAGPVLN 68

Query: 64 TK 65
           +
Sbjct: 69 AR 70


>Medtr4g103930.1 | multiprotein bridging factor 1 | LC |
          chr4:42996228-42995339 | 20130731
          Length = 156

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 31/34 (91%)

Query: 32 VNAARRSGADIETVKKFNAGTNKAASSSTSFNTK 65
          VNAARR+GADIETVKK NA T+KAASSSTS NTK
Sbjct: 45 VNAARRAGADIETVKKHNAATDKAASSSTSLNTK 78