Miyakogusa Predicted Gene

Lj0g3v0329839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329839.1 Non Characterized Hit- tr|I3S3B9|I3S3B9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.9,0,rplV_bact:
ribosomal protein L22,Ribosomal protein L22,
bacterial/chloroplast-type; seg,NULL; CHLORO,CUFF.22462.1
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g040020.2 | 50S ribosomal protein L22 | HC | chr1:14644190...   381   e-106
Medtr1g040020.3 | 50S ribosomal protein L22 | HC | chr1:14644190...   381   e-106
Medtr1g040020.1 | 50S ribosomal protein L22 | HC | chr1:14644188...   381   e-106
Medtr7g100410.1 | 50S ribosomal protein L22 | HC | chr7:40430222...    59   4e-09

>Medtr1g040020.2 | 50S ribosomal protein L22 | HC |
           chr1:14644190-14639127 | 20130731
          Length = 326

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 217/272 (79%), Gaps = 4/272 (1%)

Query: 1   MVQWQRHIFPILRHIHKGVDHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMYH 60
           MVQWQRHIFPILR IHKG++   HSA  L++ H  SS  QGQ Q  W+   PSISRP  H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 61  CFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGIK 120
            FQ+QGISSST LL NS EE                +G++QN+KA    + VQA+LK IK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 121 QSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLII 180
           QSPKKVNLVAALVRGMLVKDALLQLQ+ VKRA+KTVYQVIHSARANASHNHGL++DRLI+
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 181 AEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLSK 240
           AEA+VGKG +KKR+SIHGK R GIMHRPECRLTVV+REITPEEEA+IARLKVHNFKKL+K
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 241 RERRLVPHKLIETTPVWGRKNKPTSQNSGAAV 272
           +E RLVPH+LIETTPVWGRKNK +SQN    V
Sbjct: 237 KEGRLVPHQLIETTPVWGRKNKSSSQNETTPV 268


>Medtr1g040020.3 | 50S ribosomal protein L22 | HC |
           chr1:14644190-14639174 | 20130731
          Length = 326

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 217/272 (79%), Gaps = 4/272 (1%)

Query: 1   MVQWQRHIFPILRHIHKGVDHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMYH 60
           MVQWQRHIFPILR IHKG++   HSA  L++ H  SS  QGQ Q  W+   PSISRP  H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 61  CFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGIK 120
            FQ+QGISSST LL NS EE                +G++QN+KA    + VQA+LK IK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 121 QSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLII 180
           QSPKKVNLVAALVRGMLVKDALLQLQ+ VKRA+KTVYQVIHSARANASHNHGL++DRLI+
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 181 AEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLSK 240
           AEA+VGKG +KKR+SIHGK R GIMHRPECRLTVV+REITPEEEA+IARLKVHNFKKL+K
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 241 RERRLVPHKLIETTPVWGRKNKPTSQNSGAAV 272
           +E RLVPH+LIETTPVWGRKNK +SQN    V
Sbjct: 237 KEGRLVPHQLIETTPVWGRKNKSSSQNETTPV 268


>Medtr1g040020.1 | 50S ribosomal protein L22 | HC |
           chr1:14644188-14639192 | 20130731
          Length = 326

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 217/272 (79%), Gaps = 4/272 (1%)

Query: 1   MVQWQRHIFPILRHIHKGVDHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMYH 60
           MVQWQRHIFPILR IHKG++   HSA  L++ H  SS  QGQ Q  W+   PSISRP  H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 61  CFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGIK 120
            FQ+QGISSST LL NS EE                +G++QN+KA    + VQA+LK IK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 121 QSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLII 180
           QSPKKVNLVAALVRGMLVKDALLQLQ+ VKRA+KTVYQVIHSARANASHNHGL++DRLI+
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 181 AEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLSK 240
           AEA+VGKG +KKR+SIHGK R GIMHRPECRLTVV+REITPEEEA+IARLKVHNFKKL+K
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 241 RERRLVPHKLIETTPVWGRKNKPTSQNSGAAV 272
           +E RLVPH+LIETTPVWGRKNK +SQN    V
Sbjct: 237 KEGRLVPHQLIETTPVWGRKNKSSSQNETTPV 268


>Medtr7g100410.1 | 50S ribosomal protein L22 | HC |
           chr7:40430222-40427715 | 20130731
          Length = 198

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%)

Query: 114 AVLKGIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGL 173
           AV K I+ S  K   V   +RG   ++ L+ L+L   RA +T+ +++ SA ANAS+N GL
Sbjct: 82  AVGKHIRMSADKARRVIDTIRGRPYEETLMILELMPYRACETILKIVFSAGANASNNLGL 141

Query: 174 DSDRLIIAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPE 222
               L+I++A V +G   KR     + R   + +  C +T+ V+ +  E
Sbjct: 142 SKSSLVISKAEVNEGRTMKRTRPRAQGRANQILKRTCHITITVKGLPAE 190