Miyakogusa Predicted Gene

Lj0g3v0329639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329639.1 Non Characterized Hit- tr|I1NBW7|I1NBW7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,57.73,6e-19,coiled-coil,NULL; seg,NULL,CUFF.22450.1
         (163 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g100040.1 | pescadillo-like protein | HC | chr7:40201169-4...    84   7e-17
Medtr7g100040.2 | pescadillo-like protein | HC | chr7:40201194-4...    84   8e-17
Medtr8g010330.1 | pescadillo-like protein | HC | chr8:2648876-26...    72   3e-13

>Medtr7g100040.1 | pescadillo-like protein | HC |
           chr7:40201169-40205369 | 20130731
          Length = 609

 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 1/99 (1%)

Query: 66  QMMILEQQYHDDLKKELKGVTHTSAGSNVEKETSGGE-KTVEPATKVQENVDDTADMGXX 124
           ++M  EQ++ ++LKKELKG T+TSAGS VEKETS    +T E    VQ N DD A+MG  
Sbjct: 508 KLMKQEQRFREELKKELKGETYTSAGSAVEKETSTAVIETGESTNNVQANTDDGAEMGKL 567

Query: 125 XXXXXXXXXXEAMQISNKRKQDQTELLKQRRKRLDEAQS 163
                     EAMQISN+RK+++ + + +R+K+LDEAQ+
Sbjct: 568 LLSRRKRKLLEAMQISNERKKNKHDTIIKRKKKLDEAQN 606


>Medtr7g100040.2 | pescadillo-like protein | HC |
           chr7:40201194-40205320 | 20130731
          Length = 487

 Score = 83.6 bits (205), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 1/99 (1%)

Query: 66  QMMILEQQYHDDLKKELKGVTHTSAGSNVEKETSGGE-KTVEPATKVQENVDDTADMGXX 124
           ++M  EQ++ ++LKKELKG T+TSAGS VEKETS    +T E    VQ N DD A+MG  
Sbjct: 386 KLMKQEQRFREELKKELKGETYTSAGSAVEKETSTAVIETGESTNNVQANTDDGAEMGKL 445

Query: 125 XXXXXXXXXXEAMQISNKRKQDQTELLKQRRKRLDEAQS 163
                     EAMQISN+RK+++ + + +R+K+LDEAQ+
Sbjct: 446 LLSRRKRKLLEAMQISNERKKNKHDTIIKRKKKLDEAQN 484


>Medtr8g010330.1 | pescadillo-like protein | HC |
           chr8:2648876-2644265 | 20130731
          Length = 556

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 2/79 (2%)

Query: 84  GVTHTSAGSNVEKETSGGEKTVEPATKVQENVDDTADMGXXXXXXXXXXXXEAMQISNKR 143
            +T+TSA SNVEKETS   +T E  T  QENVD   DM             E M+ISNKR
Sbjct: 476 AITYTSADSNVEKETSCVVQTGESTTNGQENVD--TDMSLLMMPHSSRELYETMKISNKR 533

Query: 144 KQDQTELLKQRRKRLDEAQ 162
           KQ++T+L+KQR+K+LDEA+
Sbjct: 534 KQNETDLIKQRKKKLDEAK 552