Miyakogusa Predicted Gene

Lj0g3v0329519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329519.1 Non Characterized Hit- tr|B9SFW2|B9SFW2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.45,2e-18,coiled-coil,NULL; seg,NULL,CUFF.23259.1
         (387 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109470.1 | octicosapeptide/phox/Bem1p family protein | HC...   335   3e-92

>Medtr1g109470.1 | octicosapeptide/phox/Bem1p family protein | HC |
           chr1:49509995-49513014 | 20130731
          Length = 751

 Score =  335 bits (860), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 220/409 (53%), Positives = 240/409 (58%), Gaps = 36/409 (8%)

Query: 1   MGVPINSAVVSGDYQNRVFSDDERSDHGVPVGYRKXXXXXXXXXXXXXXXXXXXXXXXXA 60
           +GVPI SAVV GDYQNRVFSDDERSDHGVPVGYRK                        A
Sbjct: 354 VGVPIGSAVVVGDYQNRVFSDDERSDHGVPVGYRKPPTPQPQVVQVQPQAQNQAQTQSQA 413

Query: 61  -----------QFQQRSSGG-TXXXXXXXXXXXXXXANAMSRQKPVIYQEQVLIQSGTTR 108
                      QFQQ+SSGG +              +NAMSRQKPV+YQEQ+ IQ GTTR
Sbjct: 414 QSQAQTQSQAPQFQQKSSGGGSDLPSPDSVSSDSSLSNAMSRQKPVVYQEQIQIQPGTTR 473

Query: 109 VPTHSNPVDPKLNVSDPQSRIQVQQH-HEQGYLLXXXXXXXXXXXXXXXXXXXXXXXXXX 167
           V   SNPVDPKLN+SDP SRIQVQQH  + GYLL                          
Sbjct: 474 V---SNPVDPKLNLSDPHSRIQVQQHVQDPGYLLQQQFELQQQQQQFELQQQQQQPQHQP 530

Query: 168 XXXXXXXXXXXXXXXXXXXX--YIHGTQFIHHNPANAIPAYYPVYPSQQQTHPQHAQVYY 225
                                 +IHG  +IHHNPA  IP YYPVYPSQQQ H    QVYY
Sbjct: 531 QQSQPQHQPQQQQQLQHHQQQQFIHGGHYIHHNPA--IPTYYPVYPSQQQPH---HQVYY 585

Query: 226 VPARQAQ-AYNLSMQQANMGESG------KPQTPPNPTTLVPQTAAYNNPMRNAPLPKTE 278
           VPARQ Q  YN+S+QQANMGES       +PQ PPNPTTLV Q AAYN P+R+APLPKTE
Sbjct: 586 VPARQPQQGYNISVQQANMGESATTIPSSRPQNPPNPTTLVQQNAAYN-PIRSAPLPKTE 644

Query: 279 MTAAGYRTATGGSPQLVQVPANQLQHQQQYVTYSQIHHXXXXXXXXXXXXXXXXXDYVDP 338
           MTAA YR ATGGSPQ VQVP +  QHQQQYVTYSQIHH                 +Y DP
Sbjct: 645 MTAAAYRAATGGSPQFVQVPTS--QHQQQYVTYSQIHHPSQSMAPNSAAPASYAYEYADP 702

Query: 339 AHAQIYYSQPLAPTMPSQYQTMTAAAMVLPEGSSAQLPSDGMKQQTRPS 387
             AQ+YYSQP+APTMPSQYQTM AA M+ PE    Q PSDGMKQQ R S
Sbjct: 703 --AQVYYSQPMAPTMPSQYQTMAAATMMQPE-VPGQHPSDGMKQQIRTS 748