Miyakogusa Predicted Gene

Lj0g3v0328779.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328779.2 Non Characterized Hit- tr|D8SLB5|D8SLB5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.08,3e-18,Thioredoxin-like,Thioredoxin-like fold;
seg,NULL,CUFF.22387.2
         (538 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein ...   887   0.0  

>Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr3:11452614-11442856 | 20130731
          Length = 706

 Score =  887 bits (2292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/538 (78%), Positives = 469/538 (87%), Gaps = 1/538 (0%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L QLYSSGSNRCAEFS+SWNKIASLLDG AN GVVELGEKE+AIY ADKR TGKPFFRN
Sbjct: 169 WLIQLYSSGSNRCAEFSKSWNKIASLLDGFANTGVVELGEKEVAIYFADKRPTGKPFFRN 228

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
           GIPSL AIPPGC +AKCF RFDGE T+D VTNWFATTVL LPQINYY+KESLV NF GKS
Sbjct: 229 GIPSLFAIPPGCRSAKCFSRFDGEPTIDAVTNWFATTVLALPQINYYTKESLVANFFGKS 288

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
           S HKVKVIFFSK+GERA+P++RQ AKDYWA ASFAFILWREEESSYW GAFGVESAPAIV
Sbjct: 289 SHHKVKVIFFSKSGERASPYIRQVAKDYWAHASFAFILWREEESSYWLGAFGVESAPAIV 348

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
           FLKDPGVKPVVHHGSV+N+ FL+MME NK QELPQLRSVTSMELGCDPRGYSRAGYDT+I
Sbjct: 349 FLKDPGVKPVVHHGSVDNSLFLSMMEKNKDQELPQLRSVTSMELGCDPRGYSRAGYDTVI 408

Query: 242 WYCAIAVGRPSLELNKMRETMCRVQETLSKHSEVDASSENQSLAPAVNAYKRKRLTFAWL 301
           WYCAIAVGRPS+ELN+MRET+CRVQ+TL+K SE+DASSEN+SLAP V+A+KRKRLTFAWL
Sbjct: 409 WYCAIAVGRPSVELNRMRETICRVQDTLAKQSELDASSENESLAPVVDAFKRKRLTFAWL 468

Query: 302 DGEKQKDYCQFYLGPAASDHTCGQGRGLTDIPLIFVIRYLRNSSAVDKKTQEMKKWKSVL 361
           D EKQKDYCQFYLG  AS+ TCGQ +G+TDIP + VIRYLRNSSA+D +TQ++ KWKS+L
Sbjct: 469 DSEKQKDYCQFYLGEGASEATCGQRKGMTDIPRLLVIRYLRNSSAIDTRTQDLSKWKSLL 528

Query: 362 VQDLMDDSDQAGQFVAGYKGEVDISQITEWLANLIKDGDSRDLPFFTLRTPKLVPDDTEP 421
           VQDL+DD+DQAGQFVAGYKG  D S+IT+WL+N+IKDGDSRDLPFFTLRTPKLVPDDTEP
Sbjct: 529 VQDLIDDTDQAGQFVAGYKGTADDSEITQWLSNIIKDGDSRDLPFFTLRTPKLVPDDTEP 588

Query: 422 LWAKTSPMIPLKNLKQSIPGVLSGLSVYLEDPRIGPALLLGALISFGTIWLXXXXXXXXX 481
           +W+KT+  IPLKN+KQ I GV+ GLSVYL+DPRIGP LLL ALIS GTIWL         
Sbjct: 589 IWSKTAQQIPLKNIKQHILGVIGGLSVYLDDPRIGPFLLLAALISLGTIWLRRSQQVHLS 648

Query: 482 XXXX-XXXXXAKAPSKEDRKQRPTDRVRSRSNKKAPPSMTDWEPSDAYQMPLSDSESD 538
                      + PS ++RK RPTDRVR  S KKAPPSMTD+EPSDAYQMPL DS+SD
Sbjct: 649 QSKQPTQPSSTEPPSHDERKPRPTDRVRRPSGKKAPPSMTDFEPSDAYQMPLPDSDSD 706