Miyakogusa Predicted Gene

Lj0g3v0328779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328779.1 tr|A4RU74|A4RU74_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_14554,24.5,2e-18, ,CUFF.22387.1
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein ...   478   e-135

>Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr3:11452614-11442856 | 20130731
          Length = 706

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 223/259 (86%), Positives = 239/259 (92%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L QLYSSGSNRCAEFS+SWNKIASLLDG AN GVVELGEKE+AIY ADKR TGKPFFRN
Sbjct: 169 WLIQLYSSGSNRCAEFSKSWNKIASLLDGFANTGVVELGEKEVAIYFADKRPTGKPFFRN 228

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
           GIPSL AIPPGC +AKCF RFDGE T+D VTNWFATTVL LPQINYY+KESLV NF GKS
Sbjct: 229 GIPSLFAIPPGCRSAKCFSRFDGEPTIDAVTNWFATTVLALPQINYYTKESLVANFFGKS 288

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
           S HKVKVIFFSK+GERA+P++RQ AKDYWA ASFAFILWREEESSYW GAFGVESAPAIV
Sbjct: 289 SHHKVKVIFFSKSGERASPYIRQVAKDYWAHASFAFILWREEESSYWLGAFGVESAPAIV 348

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
           FLKDPGVKPVVHHGSV+N+ FL+MME NK QELPQLRSVTSMELGCDPRGYSRAGYDT+I
Sbjct: 349 FLKDPGVKPVVHHGSVDNSLFLSMMEKNKDQELPQLRSVTSMELGCDPRGYSRAGYDTVI 408

Query: 242 WYCAIAVGRPSLELNKMRE 260
           WYCAIAVGRPS+ELN+MRE
Sbjct: 409 WYCAIAVGRPSVELNRMRE 427