Miyakogusa Predicted Gene

Lj0g3v0328469.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328469.1 tr|D8QY72|D8QY72_SELML Cytosine-specific
methyltransferase OS=Selaginella moellendorffii
GN=MET1-1_2,45.71,5e-19,seg,NULL; DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(DNMT1),NULL; CYTOSINE-SPECIFIC METHYLTRANSFERASE,C-5,CUFF.22358.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g065580.1 | DNA (cytosine-5)-methyltransferase | HC | chr6...   219   6e-58
Medtr2g046020.1 | DNA (cytosine-5)-methyltransferase | HC | chr2...   208   2e-54
Medtr3g026210.1 | cytosine-specific methyltransferase | LC | chr...   206   1e-53

>Medtr6g065580.1 | DNA (cytosine-5)-methyltransferase | HC |
           chr6:24285011-24275638 | 20130731
          Length = 1553

 Score =  219 bits (559), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 108/162 (66%), Positives = 131/162 (80%), Gaps = 3/162 (1%)

Query: 1   MAGDXXXXRSMSERSEQLSDTCRNPKQAVSC--DNLKERSISTSKKSCLTEIKKDQVVEE 58
           MAG     RS+SE +EQ + T + PK++ S    NLKE+S S S KS L E KKDQVVEE
Sbjct: 33  MAGGKQKKRSLSESNEQPAPTRKMPKRSASAASKNLKEKSFSKSDKSDLIETKKDQVVEE 92

Query: 59  E-LAVRLTSDQDDGRPNRRITDFVLHDESGTGQPLEMLEVKDLFISGVILPLEVSTEKKK 117
           E LAVR+T+ Q+DGRPNRR+TDF+LHDESG  Q LEMLE+ DLFI+G+ILPLE ST+KKK
Sbjct: 93  EFLAVRMTAGQEDGRPNRRLTDFILHDESGAAQQLEMLELNDLFITGLILPLEASTDKKK 152

Query: 118 EKRIRCEGFGRIESWDISGYEDGSPVIWLSIDMADYECFKPA 159
           E+ +RCEGFGRIESWDISGYE+G+PVIW+S D+ADY+C KPA
Sbjct: 153 EQGVRCEGFGRIESWDISGYEEGAPVIWISTDIADYDCLKPA 194


>Medtr2g046020.1 | DNA (cytosine-5)-methyltransferase | HC |
           chr2:20167228-20158779 | 20130731
          Length = 1579

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 127/159 (79%), Gaps = 3/159 (1%)

Query: 2   AGDXXXXRSMSERSEQLSDTCRNPKQAVSC--DNLKERSISTSKKSCLTEIKKDQVVEEE 59
           AG     RS+SE SEQ + T + PK++ S    NLKE+S S S KS L E KK+QVVEEE
Sbjct: 56  AGGKQKKRSLSESSEQPAPTRKMPKRSASATSKNLKEKSFSKSDKSDLIETKKNQVVEEE 115

Query: 60  -LAVRLTSDQDDGRPNRRITDFVLHDESGTGQPLEMLEVKDLFISGVILPLEVSTEKKKE 118
            LAVR+T+ Q++GRPNRRITDF+LHDESG  + LEMLE+ DLFI+G+ILPLE ST KKKE
Sbjct: 116 FLAVRMTAGQENGRPNRRITDFILHDESGAAKQLEMLEINDLFITGLILPLEASTYKKKE 175

Query: 119 KRIRCEGFGRIESWDISGYEDGSPVIWLSIDMADYECFK 157
           + +RCEGFGRIESWDISGYE+G+PVIW+S D+ADY+C K
Sbjct: 176 QGVRCEGFGRIESWDISGYEEGAPVIWISTDIADYDCQK 214


>Medtr3g026210.1 | cytosine-specific methyltransferase | LC |
           chr3:8063275-8060270 | 20130731
          Length = 333

 Score =  206 bits (523), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 104/162 (64%), Positives = 126/162 (77%), Gaps = 4/162 (2%)

Query: 1   MAGDXXXXRSMSERSEQLSDTCRNPKQAVSC--DNLKERSISTSKKSCLTEIKKDQVVEE 58
           MAG     RS+SE SE  + TC+  K++ S    NLKE+S S S KS L E KKD+ VEE
Sbjct: 1   MAGGKQKKRSLSESSEP-APTCKMSKRSASAASKNLKEKSFSKSDKSDLIETKKDRFVEE 59

Query: 59  E-LAVRLTSDQDDGRPNRRITDFVLHDESGTGQPLEMLEVKDLFISGVILPLEVSTEKKK 117
           E LAVR+T+ Q+DGRPNRRITDF+LHDESG  Q LEM E+ DLFI+G+ILPLE S +KKK
Sbjct: 60  EFLAVRMTAGQEDGRPNRRITDFILHDESGAAQQLEMHEINDLFITGLILPLEASVDKKK 119

Query: 118 EKRIRCEGFGRIESWDISGYEDGSPVIWLSIDMADYECFKPA 159
           E+ +RCEGFGRIESWDISGYE+G+PVIW+S D+ADY+C K A
Sbjct: 120 EQGVRCEGFGRIESWDISGYEEGAPVIWISTDIADYDCQKSA 161