Miyakogusa Predicted Gene

Lj0g3v0328439.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328439.2 tr|G7J381|G7J381_MEDTR LMBR1 domain-containing
protein-like protein OS=Medicago truncatula GN=MTR_3g,82.5,0,seg,NULL;
LMBR1,LMBR1-like membrane protein; UNCHARACTERIZED,NULL;
coiled-coil,NULL,CUFF.22369.2
         (554 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086840.1 | LMBR1 integral membrane-like protein | HC | ch...   946   0.0  
Medtr8g089925.2 | LMBR1 integral membrane-like protein | HC | ch...   883   0.0  
Medtr8g089925.1 | LMBR1 integral membrane-like protein | HC | ch...   881   0.0  
Medtr4g094110.1 | LMBR1 integral membrane-like protein | HC | ch...   683   0.0  

>Medtr3g086840.1 | LMBR1 integral membrane-like protein | HC |
           chr3:39370616-39360812 | 20130731
          Length = 720

 Score =  946 bits (2444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/577 (81%), Positives = 504/577 (87%), Gaps = 24/577 (4%)

Query: 1   MACSNTFGLVTGAFLLGFGLSEIPKSIWRNAEWTTRQKVLSHKISQMAVKLDDAHQELSN 60
           M CSNTFGLVTGAFLLGFGLSEIPKSIWRNA+W TRQKVLSHKI+QMAVKLD+AHQELSN
Sbjct: 145 MTCSNTFGLVTGAFLLGFGLSEIPKSIWRNADWGTRQKVLSHKIAQMAVKLDEAHQELSN 204

Query: 61  AIVVAQATSKQMSKRDPLRRYMDVIDDMLAQMFREDPSFKPQGGQLGENDMDYDTDEKSM 120
           AIVVAQATSKQMSKRDPLR YM++IDDML QMFREDPSFKPQGGQLGENDMDYDTDEKSM
Sbjct: 205 AIVVAQATSKQMSKRDPLRPYMNIIDDMLTQMFREDPSFKPQGGQLGENDMDYDTDEKSM 264

Query: 121 ATLRRHLRKAREEYYRYKSEYMTYVLEALELEDTMNNYERRKSTGWEYNSSIRPARTGKL 180
           A LRRHLR AREEYYRYKSEY+TYVLEALELEDT+ NYERRKSTGWEYNSSIR  RTGKL
Sbjct: 265 AKLRRHLRNAREEYYRYKSEYITYVLEALELEDTIKNYERRKSTGWEYNSSIRSDRTGKL 324

Query: 181 GSVFDTLEFCWRCILRKQVEKGLAVLLGIMSVAILLAEATLLPSFDLSLFSILIKSVRTQ 240
           GS+F+TLEF W+C+LRKQVEKG+AVLLGIMSVAILLAEATLLPS DLSLFSILI+SVRTQ
Sbjct: 325 GSLFNTLEFFWKCVLRKQVEKGMAVLLGIMSVAILLAEATLLPSIDLSLFSILIRSVRTQ 384

Query: 241 EMLVQVFAFVPLMYMCMCTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPVSY 300
           E+LVQ FAFVPLMYMC+CTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPP+SY
Sbjct: 385 ELLVQAFAFVPLMYMCICTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPISY 444

Query: 301 NFLNLIRLGSNKTTIFEKRMGNIDNAVPFFGDKFNKIYPLIMVTYTLLVASNFFDRVFDF 360
           NFLNLIRLG NK TIFEKRMGNIDNAVP FGDKFNKIYPLIMVTYT+LVASNFFD+VF+F
Sbjct: 445 NFLNLIRLGPNKETIFEKRMGNIDNAVPLFGDKFNKIYPLIMVTYTVLVASNFFDKVFNF 504

Query: 361 LGSWKRYIFKTEDDDMDGLDPSGVIILQRERSWLEQGHKVG-EQVVPLARNFNGVDIESA 419
           LGSWKRYIFKTE +DMDGLDPSG+IILQ+ERSWLEQG K+G EQVVPLARNFNG+DIES 
Sbjct: 505 LGSWKRYIFKTEAEDMDGLDPSGIIILQKERSWLEQGRKIGEEQVVPLARNFNGLDIESG 564

Query: 420 NNLMERH-VEMKTNSDVITEETN-GLSKSSREETSRYGSS----------------PASK 461
           NN +ER+ VEMKT SD+ITEE N G+SK+  EET RYGSS                 +SK
Sbjct: 565 NNYVERNGVEMKTTSDLITEEVNGGISKTMDEETRRYGSSREAISSKYAAIRGQGGSSSK 624

Query: 462 RKAEEKNEASANSVLDKGS----NSGGAPSSGLASTWLNMKTGFQSFKANIGAKKFLPIR 517
            KAEEKN AS  S LD+GS    NS GAPSSGLASTW  MKTGFQSFK+NIGAKKFLP+R
Sbjct: 625 LKAEEKNVASY-SGLDEGSSNSRNSAGAPSSGLASTWQTMKTGFQSFKSNIGAKKFLPLR 683

Query: 518 QIQXXXXXXXXXXXXLDEIFQRLKGTSLDQNTYNEED 554
           Q              LDEIFQRLK  SL+Q TYN+ED
Sbjct: 684 QTLENTVSRGSSSESLDEIFQRLKQPSLNQVTYNDED 720


>Medtr8g089925.2 | LMBR1 integral membrane-like protein | HC |
           chr8:37556162-37548952 | 20130731
          Length = 592

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/574 (76%), Positives = 482/574 (83%), Gaps = 22/574 (3%)

Query: 1   MACSNTFGLVTGAFLLGFGLSEIPKSIWRNAEWTTRQKVLSHKISQMAVKLDDAHQELSN 60
           MACSNTFGLVTGAFLLGFGLSEIPK++WRNA+WTTRQKVLSHKI++MAV+LDDAHQELSN
Sbjct: 15  MACSNTFGLVTGAFLLGFGLSEIPKNVWRNADWTTRQKVLSHKIAKMAVELDDAHQELSN 74

Query: 61  AIVVAQATSKQMSKRDPLRRYMDVIDDMLAQMFREDPSFKPQGGQLGENDMDYDTDEKSM 120
           AIVVAQATS QMS+RDPLR YMDVIDD+L QMFREDPSF PQGG+LG +DMDYDTDEKSM
Sbjct: 75  AIVVAQATSNQMSRRDPLRPYMDVIDDVLTQMFREDPSFTPQGGRLGGSDMDYDTDEKSM 134

Query: 121 ATLRRHLRKAREEYYRYKSEYMTYVLEALELEDTMNNYERRKSTGWEYNSSIRPARTGKL 180
           ATLRRHLR A EEYYRYKSEYMTYVLEALE+ED   NYERR++TGW+Y SSIRPARTGKL
Sbjct: 135 ATLRRHLRGATEEYYRYKSEYMTYVLEALEVEDATKNYERRRTTGWKYMSSIRPARTGKL 194

Query: 181 GSVFDTLEFCWRCILRKQVEKGLAVLLGIMSVAILLAEATLLPSFDLSLFSILIKSVRTQ 240
           GS+FDTLEF WRCILRKQVEKGLAV+LGIMSVAILLAEATLLPS DLSLFSILIKSV TQ
Sbjct: 195 GSLFDTLEFFWRCILRKQVEKGLAVVLGIMSVAILLAEATLLPSVDLSLFSILIKSVGTQ 254

Query: 241 EMLVQVFAFVPLMYMCMCTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPVSY 300
           EMLVQ FAFVPLMYMC+CTY+SLFKIG LMFYSLTPRQTS VNLLMICSM+ARYAPPVSY
Sbjct: 255 EMLVQAFAFVPLMYMCICTYFSLFKIGRLMFYSLTPRQTSPVNLLMICSMIARYAPPVSY 314

Query: 301 NFLNLIRLGSNKTTIFEKRMGNIDNAVPFFGDKFNKIYPLIMVTYTLLVASNFFDRVFDF 360
           NFLNLIRLGS+KTTIFE+RMGNIDNAVPFFGDKFNKI+PLIMV YTLLVASNFFD+VFDF
Sbjct: 315 NFLNLIRLGSHKTTIFEQRMGNIDNAVPFFGDKFNKIFPLIMVIYTLLVASNFFDKVFDF 374

Query: 361 LGSWKRYIFKTEDDDMDGLDPSGVIILQRERSWLEQGHKVGEQVVPLARNFNGVDIESAN 420
           LG W+RYIFKTE +DMDG +PSG+IILQ+ER WLEQG KVGEQVVPLARNFN +D+ES N
Sbjct: 375 LGGWRRYIFKTEAEDMDGFNPSGLIILQKERYWLEQGRKVGEQVVPLARNFNSIDVESNN 434

Query: 421 NLMERH-VEMKTNSDVITEETNG-LSKSSREETSRYGSSP----------------ASKR 462
           N+ME++ VEMK  S +I  E NG LSK+ +EET RY SS                 ASK 
Sbjct: 435 NIMEQNDVEMKGTSTLINAEINGRLSKTLKEETRRYSSSSEAISRKYAGVRQQSGQASKL 494

Query: 463 KAEEKNEASAN-SVLDKGSNSGGAPSS--GLASTWLNMKTGFQSFKANI-GAKKFLPIRQ 518
           KAEE+N  SA  S+LDKG+   G  S   GL STW  +K GF SFKA+I GAK FLP RQ
Sbjct: 495 KAEERNLDSAKVSLLDKGNTHYGNTSGTYGLGSTWQTLKKGFTSFKADIGGAKGFLPTRQ 554

Query: 519 IQXXXXXXXXXXXXLDEIFQRLKGTSLDQNTYNE 552
            Q            LD+IF RLK  S+DQ  YN+
Sbjct: 555 TQQDMISHVSSSESLDDIFLRLKQPSMDQAFYND 588


>Medtr8g089925.1 | LMBR1 integral membrane-like protein | HC |
           chr8:37558335-37548952 | 20130731
          Length = 722

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/574 (76%), Positives = 482/574 (83%), Gaps = 22/574 (3%)

Query: 1   MACSNTFGLVTGAFLLGFGLSEIPKSIWRNAEWTTRQKVLSHKISQMAVKLDDAHQELSN 60
           MACSNTFGLVTGAFLLGFGLSEIPK++WRNA+WTTRQKVLSHKI++MAV+LDDAHQELSN
Sbjct: 145 MACSNTFGLVTGAFLLGFGLSEIPKNVWRNADWTTRQKVLSHKIAKMAVELDDAHQELSN 204

Query: 61  AIVVAQATSKQMSKRDPLRRYMDVIDDMLAQMFREDPSFKPQGGQLGENDMDYDTDEKSM 120
           AIVVAQATS QMS+RDPLR YMDVIDD+L QMFREDPSF PQGG+LG +DMDYDTDEKSM
Sbjct: 205 AIVVAQATSNQMSRRDPLRPYMDVIDDVLTQMFREDPSFTPQGGRLGGSDMDYDTDEKSM 264

Query: 121 ATLRRHLRKAREEYYRYKSEYMTYVLEALELEDTMNNYERRKSTGWEYNSSIRPARTGKL 180
           ATLRRHLR A EEYYRYKSEYMTYVLEALE+ED   NYERR++TGW+Y SSIRPARTGKL
Sbjct: 265 ATLRRHLRGATEEYYRYKSEYMTYVLEALEVEDATKNYERRRTTGWKYMSSIRPARTGKL 324

Query: 181 GSVFDTLEFCWRCILRKQVEKGLAVLLGIMSVAILLAEATLLPSFDLSLFSILIKSVRTQ 240
           GS+FDTLEF WRCILRKQVEKGLAV+LGIMSVAILLAEATLLPS DLSLFSILIKSV TQ
Sbjct: 325 GSLFDTLEFFWRCILRKQVEKGLAVVLGIMSVAILLAEATLLPSVDLSLFSILIKSVGTQ 384

Query: 241 EMLVQVFAFVPLMYMCMCTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPVSY 300
           EMLVQ FAFVPLMYMC+CTY+SLFKIG LMFYSLTPRQTS VNLLMICSM+ARYAPPVSY
Sbjct: 385 EMLVQAFAFVPLMYMCICTYFSLFKIGRLMFYSLTPRQTSPVNLLMICSMIARYAPPVSY 444

Query: 301 NFLNLIRLGSNKTTIFEKRMGNIDNAVPFFGDKFNKIYPLIMVTYTLLVASNFFDRVFDF 360
           NFLNLIRLGS+KTTIFE+RMGNIDNAVPFFGDKFNKI+PLIMV YTLLVASNFFD+VFDF
Sbjct: 445 NFLNLIRLGSHKTTIFEQRMGNIDNAVPFFGDKFNKIFPLIMVIYTLLVASNFFDKVFDF 504

Query: 361 LGSWKRYIFKTEDDDMDGLDPSGVIILQRERSWLEQGHKVGEQVVPLARNFNGVDIESAN 420
           LG W+RYIFKTE +DMDG +PSG+IILQ+ER WLEQG KVGEQVVPLARNFN +D+ES N
Sbjct: 505 LGGWRRYIFKTEAEDMDGFNPSGLIILQKERYWLEQGRKVGEQVVPLARNFNSIDVESNN 564

Query: 421 NLMERH-VEMKTNSDVITEETNG-LSKSSREETSRYGSSP----------------ASKR 462
           N+ME++ VEMK  S +I  E NG LSK+ +EET RY SS                 ASK 
Sbjct: 565 NIMEQNDVEMKGTSTLINAEINGRLSKTLKEETRRYSSSSEAISRKYAGVRQQSGQASKL 624

Query: 463 KAEEKNEASAN-SVLDKGSNSGGAPSS--GLASTWLNMKTGFQSFKANI-GAKKFLPIRQ 518
           KAEE+N  SA  S+LDKG+   G  S   GL STW  +K GF SFKA+I GAK FLP RQ
Sbjct: 625 KAEERNLDSAKVSLLDKGNTHYGNTSGTYGLGSTWQTLKKGFTSFKADIGGAKGFLPTRQ 684

Query: 519 IQXXXXXXXXXXXXLDEIFQRLKGTSLDQNTYNE 552
            Q            LD+IF RLK  S+DQ  YN+
Sbjct: 685 TQQDMISHVSSSESLDDIFLRLKQPSMDQAFYND 718


>Medtr4g094110.1 | LMBR1 integral membrane-like protein | HC |
           chr4:37281984-37276654 | 20130731
          Length = 709

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/556 (62%), Positives = 422/556 (75%), Gaps = 17/556 (3%)

Query: 1   MACSNTFGLVTGAFLLGFGLSEIPKSIWRNAEWTTRQKVLSHKISQMAVKLDDAHQELSN 60
           MACSNTFGLVTGAFLLGFG+SEIPK IW NA+W  +QK LSHK+++MAVKLDDAHQ+ SN
Sbjct: 144 MACSNTFGLVTGAFLLGFGMSEIPKGIWLNADWAIQQKFLSHKVAKMAVKLDDAHQDFSN 203

Query: 61  AIVVAQATSKQMSKRDPLRRYMDVIDDMLAQMFREDPSFKPQGGQLGENDMDYDTDEKSM 120
           AIV+ QATSKQMSKRD LR YM++ID ML QM  EDPSFKPQGG+LGE+DMDYDTDEKSM
Sbjct: 204 AIVITQATSKQMSKRDSLRPYMNIIDKMLVQMLNEDPSFKPQGGRLGESDMDYDTDEKSM 263

Query: 121 ATLRRHLRKAREEYYRYKSEYMTYVLEALELEDTMNNYERRKSTGWEYNSSIRPARTGKL 180
           A+LRR LR+ARE+YYRY+SEY  +VLEALELEDT+ NY+RR STGW Y S +RP R GK+
Sbjct: 264 ASLRRRLRRAREQYYRYRSEYTKFVLEALELEDTVKNYDRRDSTGWRYISCLRPERIGKV 323

Query: 181 GSVFDTLEFCWRCILRKQVEKGLAVLLGIMSVAILLAEATLLPS-FDLSLFSILIKSVRT 239
           G+V DT+EF WRCILRKQ+EK LAV+LG MS AILLAEAT+LPS  DLSLFSIL+ +   
Sbjct: 324 GAVLDTIEFLWRCILRKQLEKSLAVILGFMSFAILLAEATILPSGVDLSLFSILVHAAGH 383

Query: 240 QEMLVQVFAFVPLMYMCMCTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPVS 299
            E+LVQ+ AFVPLMYMC+CTYYSLFK+GM MFYSLTPRQTSSV+LLMICSMVARYA P+S
Sbjct: 384 TEVLVQLAAFVPLMYMCVCTYYSLFKMGMFMFYSLTPRQTSSVSLLMICSMVARYAAPIS 443

Query: 300 YNFLNLIRLGSNKTTIFEKRMGNIDNAVPFFGDKFNKIYPLIMVTYTLLVASNFFDRVFD 359
           YNFLNLI +G ++ T+FEK+MGNID+AVPFFG  FNKIYPLIMV YT L+A NFF+RV +
Sbjct: 444 YNFLNLINIGGDRKTVFEKKMGNIDDAVPFFGKGFNKIYPLIMVIYTSLIAGNFFNRVIN 503

Query: 360 FLGSWKRYIFKTEDDDMDGLDPSGVIILQRERSWLEQGHKVGEQVVPLARNFN-GVDIES 418
           + G+WK + F  + +DMDG DPSGVIILQ+ERS L+QGHKVGE V PLAR+F+  +D+ES
Sbjct: 504 YCGNWKIFKFSDDAEDMDGFDPSGVIILQKERSLLQQGHKVGELVFPLARSFSMSMDVES 563

Query: 419 ANN---LMERHVEMKTNSDVITEETNGLSKSSREETSRYGSS--------PASKRKAEEK 467
            NN    ++  V  +  + ++ E  N  +  SR+   R  S+         +SK    E 
Sbjct: 564 VNNRAKALDESVASEDKTTIMVETKNEEADMSRKIGGRKYSALRTNLNEEGSSKDFTLEI 623

Query: 468 NEASANSVLDKGSNSGGAPSSGLASTWLNMKTGFQSFKANIGAKKFLPI--RQIQXXXXX 525
           N +S  +  D   ++  APSS + S W +M  GF++ K+NI + KFLP+           
Sbjct: 624 NSSSLTN--DSHPDTSSAPSSVITSKWESMMHGFKNLKSNIDSNKFLPLSNNNTYTSSLN 681

Query: 526 XXXXXXXLDEIFQRLK 541
                  LD+IF+RLK
Sbjct: 682 STSSFESLDDIFERLK 697