Miyakogusa Predicted Gene

Lj0g3v0328149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328149.1 Non Characterized Hit- tr|J3LWY5|J3LWY5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,27.4,7e-18,Kinesin-related,Kinesin-related conserved domain;
coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NU,CUFF.22338.1
         (497 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g094310.1 | kinesin motor domain protein | HC | chr5:41209...   460   e-129
Medtr3g055940.1 | kinesin motor domain protein | HC | chr3:22217...   337   2e-92
Medtr3g084790.1 | phragmoplast-associated kinesin-related protei...    79   1e-14
Medtr8g080910.1 | phragmoplast-associated kinesin-related protei...    67   5e-11

>Medtr5g094310.1 | kinesin motor domain protein | HC |
           chr5:41209361-41203620 | 20130731
          Length = 1161

 Score =  460 bits (1183), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 284/480 (59%), Positives = 321/480 (66%), Gaps = 42/480 (8%)

Query: 24  DNEIDEEVNVGEEDIRQLRQQIDELYMSCEGNPKDISVSEDCVPYYSVEESCDTDMTSCD 83
           DN+ DEEVNV EED+++LRQQIDE Y SCEGNP DISVSEDCV YYSVEE  +++     
Sbjct: 482 DNDTDEEVNVNEEDVKELRQQIDEFYSSCEGNPIDISVSEDCVQYYSVEEGDESEKEE-- 539

Query: 84  EIEKEEVCSKETSSDLCHKDS------AAPEDTSRAIKSTFRESISVSSCCRSP-ILEEP 136
                 VC  E    LCH+DS      A+  +TSRAI+S+FR+SISVSS  RSP +LEEP
Sbjct: 540 ------VCLGEEFIKLCHEDSDDNTLYASVNNTSRAIRSSFRDSISVSSSIRSPMLLEEP 593

Query: 137 LLSESPKISNIKRKSVAFSSSCLGSWNNVAEENSSSS---IGQSFKKDELMQSSLRSSKV 193
            LSESPKI N++RKSVAFSSSCLGS N +AE+NSSS+   +G+SF KDELM+SSLRSS V
Sbjct: 594 QLSESPKIRNLQRKSVAFSSSCLGSSNKLAEDNSSSNKDLLGKSFTKDELMRSSLRSSNV 653

Query: 194 FPGPTESLAASLQRGLQIIDHHQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQ 253
           FPGPTESLAASL+RGLQIID HQRNS LNKS  SFSF  L+   C     GDS D TIQQ
Sbjct: 654 FPGPTESLAASLKRGLQIIDSHQRNSLLNKSSTSFSFGRLS---C-----GDSSDQTIQQ 705

Query: 254 KKYSIDERTATLLCESCRIKICDKEDSIKVKDSLKSLSDTAEAGNQDGLTANVPNDLE-- 311
           KKYSIDERTATLLC  CR  ICD +DS +V  S+    DTAE+GN DGLT   P  LE  
Sbjct: 706 KKYSIDERTATLLCGYCRKIICD-QDSNEVPGSI----DTAESGNPDGLTDKAPKGLESI 760

Query: 312 MAKSIIREKELERLCKEQAARIEELNQLVEKLKGEKEINSIVVYGQEXXXXXXXXXXXXH 371
           M K I REKELE +CKEQA RI+ELNQLVEKLKGEKE+NSIVVYG+E             
Sbjct: 761 MEKEITREKELENVCKEQAVRIDELNQLVEKLKGEKELNSIVVYGKESSKQAEDAEEYK- 819

Query: 372 LPDNXXX------XXXXXXXXXXFDQRNCSFDATEKEELLKEIQNLRSKLQLYNDAPAKM 425
           LP                       QR+ SFDATEKEELLKEIQNLRSKLQLY+DAP KM
Sbjct: 820 LPRGTSSDCDLEEKYEIKEVREELTQRSISFDATEKEELLKEIQNLRSKLQLYSDAPVKM 879

Query: 426 STDXXXXXXXXXXXXXXXXXVFS--NHNAXXXXXXXXXXXXXXSDWICLTDELRVDLESN 483
           STD                 VFS  N+                S+WICLTDELRVDLE+N
Sbjct: 880 STDKLRSSLMSRSIQLRKSGVFSPNNNGGEELEKERERWTEMESEWICLTDELRVDLEAN 939


>Medtr3g055940.1 | kinesin motor domain protein | HC |
           chr3:22217821-22210873 | 20130731
          Length = 1108

 Score =  337 bits (863), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 224/473 (47%), Positives = 260/473 (54%), Gaps = 78/473 (16%)

Query: 23  FDNEIDEEVNVGEEDIRQLRQQIDELYMSCEGNPKDISVSEDCVPYYSVEESCDTDMTSC 82
            DN     VNVGE+DI+QLRQQIDEL  SCEG PK ISV EDCV +YS EE+ D D T  
Sbjct: 478 LDNNTGVAVNVGEDDIQQLRQQIDELDSSCEGVPKYISVGEDCVQFYSFEENYDADTTIG 537

Query: 83  DEIEKEEVCSKETSSDLCHKDSAAPEDTSRAIKSTFRESISVSSCCRSPILEEPLLSESP 142
           +E                               ++  +SISV SC +SPI + P LSESP
Sbjct: 538 EE-------------------------------NSVGDSISVISCSKSPIFDGPELSESP 566

Query: 143 KISNIKRKSVAFSSSCLGSWNNVAEENSSSS--IGQSFKKDELMQSSLRSSKVFPGPTES 200
           K  N +RKSVAFSSS LGS NNV+E ++  +   G+ FK+ E MQ+SL+S     G  ES
Sbjct: 567 KFRNNQRKSVAFSSSYLGSGNNVSESSTFGNDLSGKLFKRGEHMQTSLQS-----GKAES 621

Query: 201 LAASLQRGLQIIDHHQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQKKYSIDE 260
           LA SLQRGLQIID+HQ+NS LNKS +SFSF  LTLTPC EIDK +  D TIQQ   S DE
Sbjct: 622 LAESLQRGLQIIDYHQQNSPLNKSSSSFSFGRLTLTPCLEIDKVEPYDQTIQQ-NISNDE 680

Query: 261 RTATLLCESCRIKICDKEDSIKVKDSLKSLSDTAEAGNQDGLTANVPNDLE--MAKSIIR 318
            T+T LC SCR  + DK                            VP  LE   AK  +R
Sbjct: 681 VTSTFLCASCRTDLTDK----------------------------VPKHLENVRAKDQMR 712

Query: 319 EKELERLCKEQAARIEELNQLVEKLKGEKEINSIVVY--GQE------XXXXXXXXXXXX 370
           E ELE +CKEQAARIE+LNQLVEKLKGEK +NSI V+  G+E                  
Sbjct: 713 ETELESVCKEQAARIEQLNQLVEKLKGEKNMNSISVFDEGEECSSMKDENKLLRSNSLHG 772

Query: 371 HLPDNXXXXXXXXXXXXXFDQRNCSFDATEKEELLKEIQNLRSKLQLYNDAPAKMSTDXX 430
           H                  DQR  SFD+TEKE LLKEIQ+LRSKLQLY+DAP K+STD  
Sbjct: 773 HSLYVIEEKCEIKEVLEELDQREISFDSTEKESLLKEIQSLRSKLQLYSDAPVKISTDKL 832

Query: 431 XXXXXXXXXXXXXXXVFSNHNAXXXXXXXXXX-XXXXSDWICLTDELRVDLES 482
                          VFS+ N                SDWICLTDELR DLES
Sbjct: 833 RTSLMSRSIQLQKSGVFSHDNRNEELENERERWTEMESDWICLTDELRADLES 885


>Medtr3g084790.1 | phragmoplast-associated kinesin-related protein |
           HC | chr3:38288838-38295581 | 20130731
          Length = 1246

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 18/337 (5%)

Query: 24  DNEIDEEVNVGEEDIRQLRQQIDELYMSCEGNPKDISVSEDCVPYYSVEESCDTDMTSCD 83
           D + DEE+ + EED+     Q++  ++S   N  +I   +   P    EE  +  ++   
Sbjct: 507 DEDGDEEMEIAEEDVED-HDQVN--FVSENDNKMNIDDMDLVQPS---EEKINPSVSGSK 560

Query: 84  EIEKEEVCSKETSSDLCHKDSAAPEDTSRAIKSTFR----ESISVSSCCRSPILEEPLLS 139
            + KE  C    S        +AP+ ++ +  +T        +S+ +C  SP L+ P  S
Sbjct: 561 PLNKESSCPVGESDIGDFTGFSAPDPSNDSPSATMNCVSPGGLSIVACEISPNLKSPTPS 620

Query: 140 ESPKISNIKRKSVAFSSSCLGSWNNVAEENSSSSIGQSFKKDELMQSSLRSSKVFPGPTE 199
            SP+IS   RKS+  SS    S N+V    S   I  S  K      S ++   F   TE
Sbjct: 621 VSPRIST-SRKSLRTSSGVSPSENDV-HVKSELGIKTSNLKSSCTAFSSQTGPSFLTKTE 678

Query: 200 SLAASLQRGLQIIDHHQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQKKYSID 259
           +LAAS++ GL+IID H R++AL +S   FS           +DK D    TI     +++
Sbjct: 679 NLAASIRHGLEIIDSH-RSAALRQSSYRFSLRPRESRLTVPVDKIDVGVQTILDD--NVE 735

Query: 260 ERTATLLCESCRIKICDKEDSIKVKDSLKSLSDTAEAGNQDGLTANVPNDLE--MAKSII 317
           E +    C +C+ +     +      +L+ L     +G+ D    +V   +E  +A SI 
Sbjct: 736 EDSILFTCSNCKNRAQLDGNETDSNSNLQ-LVPVECSGSADKPKMHVLKAVEKVLAGSIR 794

Query: 318 REKELERLCKEQAARIEELNQLVEKLKGEKEINSIVV 354
           RE  LE  C +Q + I +LN+LV++ K E+E N+I+ 
Sbjct: 795 REMALEEFCTKQNSEIMQLNRLVQQYKNERECNAIIA 831


>Medtr8g080910.1 | phragmoplast-associated kinesin-related protein |
           HC | chr8:34947024-34938642 | 20130731
          Length = 1160

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 149/363 (41%), Gaps = 42/363 (11%)

Query: 102 KDSAAPEDTSRAI---KSTFR---ESISVSSCCRSPILEEPLLSESPKISNIKRKSVAFS 155
           +DSA   DT R I    +T      +  V  C   P L+ P  S SP IS+  RKS+   
Sbjct: 486 RDSAGFSDTKRCIDFPSATMNCDNPATLVVKCATDPTLKSPPPSVSPTISS-SRKSLKTL 544

Query: 156 SSCLGSWNNVAEENSSSSIGQSFKK---DELMQSSLRSSKV--FPGPTESLAASLQRGLQ 210
           S    S NN+  E+    +     K    + M ++L S K   F   TE+L AS++ GL+
Sbjct: 545 SKLSPSQNNLHCESDLGMMSGLVTKTVNQKSMSNALSSLKAQNFLTKTENLTASIRHGLE 604

Query: 211 IIDHHQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQKKYSIDERTATLLCESC 270
            ID+H  ++A  +S    S           +DK +    T        +E +  L C +C
Sbjct: 605 TIDNHHSSAAFGRSSLRLSLRPEDSKLTFPVDKVNVGVQTFVDNNAG-EEDSVMLNCNNC 663

Query: 271 RIKICDKEDSIKVKDSLKSLS-DTAEAGNQDGLTANVPNDLEMAKSIIREKELERLCKEQ 329
           +I++      I    +++ +  D  E+ ++         +  +A SI RE  LE LC +Q
Sbjct: 664 KIRMQLDVSKIDNNSNMQLVPVDCPESADKPKKQVLKAAEKVLAGSIRREMALEELCAKQ 723

Query: 330 AARIEELNQLVEKLKGEKEINSIVVYGQEXXXXXXXXXX--------------------- 368
            + I +LN L+++ K E+E N+++   +E                               
Sbjct: 724 TSEIMQLNHLLQQYKHERECNAVIGQTREGKIQRLQSLMDGVLPTEEFMSEELVSLTHEH 783

Query: 369 ------XXHLPDNXXXXXXXXXXXXXFDQRNCSFDATEKEELLKEIQNLRSKLQLYND-A 421
                   H P+                +    ++  E+E L++EI NLR++L  Y D +
Sbjct: 784 ELLKENYEHHPEVLKMKIELKRVQDKLQEYQNFYEFGEREVLMEEICNLRNQLHFYMDHS 843

Query: 422 PAK 424
           PA+
Sbjct: 844 PAR 846