Miyakogusa Predicted Gene

Lj0g3v0327989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327989.1 tr|B9HVS3|B9HVS3_POPTR Cytokinin receptor 1B
OS=Populus trichocarpa GN=CRE1B PE=2
SV=1,50,2e-19,coiled-coil,NULL,gene.g25597.t1.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g080770.2 | cytokinin receptor histidine kinase | HC | chr...   150   3e-37
Medtr8g080770.1 | cytokinin receptor histidine kinase | HC | chr...   149   4e-37
Medtr3g085130.2 | cytokinin receptor histidine kinase | HC | chr...   142   5e-35
Medtr3g085130.1 | cytokinin receptor histidine kinase | HC | chr...   141   1e-34
Medtr5g097410.1 | cytokinin receptor histidine kinase | HC | chr...   118   1e-27
Medtr8g106150.3 | cytokinin receptor histidine kinase | HC | chr...   100   3e-22
Medtr8g106150.2 | cytokinin receptor histidine kinase | HC | chr...   100   3e-22
Medtr8g106150.4 | cytokinin receptor histidine kinase | HC | chr...   100   3e-22
Medtr8g106150.1 | cytokinin receptor histidine kinase | HC | chr...   100   3e-22
Medtr2g067240.1 | histidine kinase cytokinin receptor | HC | chr...    97   2e-21

>Medtr8g080770.2 | cytokinin receptor histidine kinase | HC |
           chr8:34768417-34773414 | 20130731
          Length = 861

 Score =  150 bits (378), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 78/99 (78%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGSN+SGDVF HV TLNFGDPFRKHEM  RFKQ PP PW AI TS G  VIALL+  I 
Sbjct: 194 MYGSNISGDVFNHVSTLNFGDPFRKHEMHCRFKQKPPLPWAAIYTSSGILVIALLVGHIF 253

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           YA+V  IAKVE+DY EMMELK+RAEAADVAKSQ    +S
Sbjct: 254 YATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVS 292


>Medtr8g080770.1 | cytokinin receptor histidine kinase | HC |
           chr8:34767110-34773417 | 20130731
          Length = 970

 Score =  149 bits (377), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 78/99 (78%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGSN+SGDVF HV TLNFGDPFRKHEM  RFKQ PP PW AI TS G  VIALL+  I 
Sbjct: 303 MYGSNISGDVFNHVSTLNFGDPFRKHEMHCRFKQKPPLPWAAIYTSSGILVIALLVGHIF 362

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           YA+V  IAKVE+DY EMMELK+RAEAADVAKSQ    +S
Sbjct: 363 YATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVS 401


>Medtr3g085130.2 | cytokinin receptor histidine kinase | HC |
           chr3:38463428-38458000 | 20130731
          Length = 824

 Score =  142 bits (359), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 78/99 (78%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGS+VSGD FYHV  LNFGDPFRKHEM  RFKQ PPFP LA  TSIG  VIALL+  I 
Sbjct: 148 MYGSDVSGDEFYHVSFLNFGDPFRKHEMHCRFKQKPPFPRLATGTSIGILVIALLVGHIF 207

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           +A+V  IAKVE+DY+EMM LK+RAEAADVAKSQ    +S
Sbjct: 208 HATVSRIAKVEDDYQEMMVLKKRAEAADVAKSQFLATVS 246


>Medtr3g085130.1 | cytokinin receptor histidine kinase | HC |
           chr3:38464457-38458741 | 20130731
          Length = 1034

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 78/99 (78%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGS+VSGD FYHV  LNFGDPFRKHEM  RFKQ PPFP LA  TSIG  VIALL+  I 
Sbjct: 358 MYGSDVSGDEFYHVSFLNFGDPFRKHEMHCRFKQKPPFPRLATGTSIGILVIALLVGHIF 417

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           +A+V  IAKVE+DY+EMM LK+RAEAADVAKSQ    +S
Sbjct: 418 HATVSRIAKVEDDYQEMMVLKKRAEAADVAKSQFLATVS 456


>Medtr5g097410.1 | cytokinin receptor histidine kinase | HC |
           chr5:42664731-42671175 | 20130731
          Length = 1269

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYG++V      H+  L+FGDP RKHEM  RFK  PPFPW A   S+G FVI  LL  I 
Sbjct: 528 MYGTDVLDTGLLHISGLDFGDPLRKHEMHCRFKHTPPFPWTAFWASVGVFVITFLLGYIF 587

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLSPVRSE 104
           YA++  IAKVE+DY +M ELK RAEAADVAKSQ   +L+ V  E
Sbjct: 588 YAAINRIAKVEDDYCQMRELKVRAEAADVAKSQ---FLATVSHE 628


>Medtr8g106150.3 | cytokinin receptor histidine kinase | HC |
           chr8:44822464-44817990 | 20130731
          Length = 760

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GDV   H   L+FGDP+RKH+M  R+ Q  P  W A++T+I FFVI LL+  
Sbjct: 49  MYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAILFFVILLLIGY 108

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+ EM ELK RAEAADVAKSQ    +S
Sbjct: 109 ILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVS 149


>Medtr8g106150.2 | cytokinin receptor histidine kinase | HC |
           chr8:44824480-44817990 | 20130731
          Length = 1003

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GDV   H   L+FGDP+RKH+M  R+ Q  P  W A++T+I FFVI LL+  
Sbjct: 292 MYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAILFFVILLLIGY 351

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+ EM ELK RAEAADVAKSQ    +S
Sbjct: 352 ILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVS 392


>Medtr8g106150.4 | cytokinin receptor histidine kinase | HC |
           chr8:44823842-44817990 | 20130731
          Length = 1003

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GDV   H   L+FGDP+RKH+M  R+ Q  P  W A++T+I FFVI LL+  
Sbjct: 292 MYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAILFFVILLLIGY 351

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+ EM ELK RAEAADVAKSQ    +S
Sbjct: 352 ILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVS 392


>Medtr8g106150.1 | cytokinin receptor histidine kinase | HC |
           chr8:44824500-44817990 | 20130731
          Length = 1003

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GDV   H   L+FGDP+RKH+M  R+ Q  P  W A++T+I FFVI LL+  
Sbjct: 292 MYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAILFFVILLLIGY 351

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+ EM ELK RAEAADVAKSQ    +S
Sbjct: 352 ILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVS 392


>Medtr2g067240.1 | histidine kinase cytokinin receptor | HC |
           chr2:28129199-28130841 | 20130731
          Length = 255

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GDV   H   L+FGDP+RKH+M  R+ Q  P  W A++T+I FFVI LL+  
Sbjct: 78  MYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAILFFVILLLIGY 137

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  +I KVE+D+ EM ELK RAEAADVAKSQ    +S
Sbjct: 138 ILYGAGNYIVKVEDDFHEMQELKVRAEAADVAKSQFLATVS 178