Miyakogusa Predicted Gene

Lj0g3v0327959.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327959.1 Non Characterized Hit- tr|D7TND6|D7TND6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.35,5e-16,seg,NULL,gene.g25595.t1.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107970.1 | WRKY family transcription factor | HC | chr4:4...   131   5e-31
Medtr4g107970.2 | WRKY family transcription factor | HC | chr4:4...   130   8e-31

>Medtr4g107970.1 | WRKY family transcription factor | HC |
           chr4:44750401-44754733 | 20130731
          Length = 613

 Score =  131 bits (330), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 122/260 (46%), Positives = 140/260 (53%), Gaps = 41/260 (15%)

Query: 21  FYLSSDGSKSKQLHHLSNPALSSSSHHDHPTITLDLTTNPNXXXXXXPFVRFN------N 74
           FYL  DG+KS QL+ LSNPALSS   H HPTITLDLT+NP+      PFVRFN      N
Sbjct: 358 FYLP-DGTKSNQLY-LSNPALSS--QHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNN 413

Query: 75  QL-RYPXXXXXXXXXXXXXXXXWTNNGFLNYAT--HQPYXXXXXXXILSSVNFGRQQAAE 131
           QL RYP                W  N FLNYAT  +QPY        LS++NFGRQ   E
Sbjct: 414 QLPRYPSSTLSFSSPESNPMH-W--NSFLNYATTQNQPYSNNRNNNNLSTLNFGRQNTME 470

Query: 132 NIYQSYMQKXXXXXXXXX---XQSETVSAATKAITAHPNFQSALAAALTSFIGSSNTPG- 187
           +IYQ+YMQK             Q  T+SAATKAITA P FQSALAAAL+S IG++   G 
Sbjct: 471 SIYQTYMQKNNNSSNISQHVGLQDSTISAATKAITADPTFQSALAAALSSLIGNTTNQGN 530

Query: 188 -------NLGHKMTWAELFPAASNSTATLPSTSKASASNFFNKTP--------------S 226
                  NL  KM WAE+F  +S S  +  S     AS+F NKT                
Sbjct: 531 QNQSAGENLSQKMKWAEMFQVSSTSLPSSSSKVNGCASSFLNKTAPVNNTQNGSLMLLSP 590

Query: 227 SLPFSTPKSASASPGDSNGN 246
           SLPFS  KSAS SPG  N +
Sbjct: 591 SLPFSATKSASTSPGGDNSD 610


>Medtr4g107970.2 | WRKY family transcription factor | HC |
           chr4:44750401-44754733 | 20130731
          Length = 536

 Score =  130 bits (328), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/260 (46%), Positives = 140/260 (53%), Gaps = 41/260 (15%)

Query: 21  FYLSSDGSKSKQLHHLSNPALSSSSHHDHPTITLDLTTNPNXXXXXXPFVRFN------N 74
           FYL  DG+KS QL+ LSNPALSS   H HPTITLDLT+NP+      PFVRFN      N
Sbjct: 281 FYLP-DGTKSNQLY-LSNPALSS--QHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNN 336

Query: 75  QL-RYPXXXXXXXXXXXXXXXXWTNNGFLNYAT--HQPYXXXXXXXILSSVNFGRQQAAE 131
           QL RYP                W  N FLNYAT  +QPY        LS++NFGRQ   E
Sbjct: 337 QLPRYPSSTLSFSSPESNPMH-W--NSFLNYATTQNQPYSNNRNNNNLSTLNFGRQNTME 393

Query: 132 NIYQSYMQKXXXXXXXXX---XQSETVSAATKAITAHPNFQSALAAALTSFIGSSNTPG- 187
           +IYQ+YMQK             Q  T+SAATKAITA P FQSALAAAL+S IG++   G 
Sbjct: 394 SIYQTYMQKNNNSSNISQHVGLQDSTISAATKAITADPTFQSALAAALSSLIGNTTNQGN 453

Query: 188 -------NLGHKMTWAELFPAASNSTATLPSTSKASASNFFNKTP--------------S 226
                  NL  KM WAE+F  +S S  +  S     AS+F NKT                
Sbjct: 454 QNQSAGENLSQKMKWAEMFQVSSTSLPSSSSKVNGCASSFLNKTAPVNNTQNGSLMLLSP 513

Query: 227 SLPFSTPKSASASPGDSNGN 246
           SLPFS  KSAS SPG  N +
Sbjct: 514 SLPFSATKSASTSPGGDNSD 533