Miyakogusa Predicted Gene

Lj0g3v0327789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327789.1 Non Characterized Hit- tr|I1MAK8|I1MAK8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,69.56,0,no
description,Ribonuclease II/R; RIBONUCLEASE_II,Ribonuclease II/R,
conserved site; seg,NULL; SUBFA,CUFF.22317.1
         (1077 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g059080.1 | ribonuclease II family protein | HC | chr5:243...  1339   0.0  
Medtr5g058810.1 | ribonuclease II family protein | HC | chr5:242...  1019   0.0  
Medtr8g073170.1 | exosome complex exonuclease RRP44 | HC | chr8:...   302   1e-81
Medtr4g021750.2 | ribonuclease II | HC | chr4:7203751-7191578 | ...    82   4e-15
Medtr4g021750.1 | ribonuclease II | HC | chr4:7207202-7191578 | ...    82   4e-15
Medtr4g021750.3 | ribonuclease II | HC | chr4:7207197-7191693 | ...    82   4e-15

>Medtr5g059080.1 | ribonuclease II family protein | HC |
            chr5:24380512-24374112 | 20130731
          Length = 1107

 Score = 1339 bits (3466), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 693/1106 (62%), Positives = 820/1106 (74%), Gaps = 75/1106 (6%)

Query: 13   QNPSSFSASEVKETPGGSSECLGKNDTPVPSTASLSNPLKQQGTNVYSTNEQVLPQASNF 72
            QNP S SASEV E  G S EC GKN TPV  + S+SN L      +              
Sbjct: 35   QNPPS-SASEVNEAIGVSPECSGKNGTPVQPSGSVSNSLAPSDDPI-------------- 79

Query: 73   VFGSVPPMLINEHVQPV-LQNIQMPGGGIDSISLSDPIGCRGSSGRNSK------TKYPL 125
               S+P +  N  V P  +Q + +    +   +  +P+GC  SSG N K      +K+ L
Sbjct: 80   ---SIPLIPYNGPVAPADMQKMLLHLRTLVLQNSPEPVGCLESSGTNEKKDSARYSKFGL 136

Query: 126  G---KYFSPHWSQEAVEKALERGDVLKARFHVNVHNTLEAYCKIDGVPTDVLINGFLAQN 182
                 YFSPHWS E VEKALERGDV KA F VN HN  EAYC IDGVPTD+LI G  AQN
Sbjct: 137  SGQRNYFSPHWSVEVVEKALERGDVFKATFRVNAHNRTEAYCSIDGVPTDILIVGAPAQN 196

Query: 183  RAVEGDIVAVKIDPLPLWTKMKGPIVNGNNMATLESCNL-VEDDGAGVNNCKGIGKVDAD 241
            RAVEGDIVA+KIDPLPLWTKMKGP V  NN A LE CNL VED+ AG NNC+GI KVDAD
Sbjct: 197  RAVEGDIVAIKIDPLPLWTKMKGPNVANNNTAVLEGCNLLVEDNIAGDNNCEGIEKVDAD 256

Query: 242  YESAHSRSPGKNKEDSDDHSSTPDKSSPFPETRCIYEDNTSQGSANHINPLGLASHDGSD 301
            +E +     G+NKE+S D+SS P +S PFPE R IYE+NT+QGS NH++ +GL   D +D
Sbjct: 257  HEYS-----GQNKEESFDNSS-PYRSYPFPEKRYIYENNTTQGSPNHLSLIGLTGRDNND 310

Query: 302  GTHCAASYSLEMNSCNGQGKVINAVEKMCLLVKSFPSKRPTGRVVAIVERSPRREGIVGH 361
            G +C +  S+++NS +GQ +V+NAVEK+CLLV SFPSKRPTGRVVA++ERSPRRE IVGH
Sbjct: 311  GPNCDSPASIKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGRVVAVIERSPRRECIVGH 370

Query: 362  LNDIYCLCCKTYSREITK---------LCEPEYFQLTPIDPKFPSVIILMRDLPECLKKR 412
            LN    +    +S+EI K         + E EY QLTPIDPKFP++++L+RDLP+ +K R
Sbjct: 371  LN----VKQWVFSQEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIMLLVRDLPKSIKIR 426

Query: 413  WECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDAILFQNAICLSEFS 472
             +  D  +E+DLVA QI DW EE PFPEG +L  FGRG E+QP LD+ILF+NAICLSEFS
Sbjct: 427  LKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQHFGRGSEIQPNLDSILFKNAICLSEFS 486

Query: 473  PEALSCLPCVPWELPPKEIKSRKDLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGVH 532
             EALSCLP   WELP KE++SR DLRNLC+F+IDPSTATDLDDALSIEKLP+GNYRVG+H
Sbjct: 487  AEALSCLPHATWELPLKELQSRTDLRNLCIFSIDPSTATDLDDALSIEKLPNGNYRVGIH 546

Query: 533  IADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENIGSLNPGVDRLTVSILLD 592
            IADVSYFVLP TALD EAQ RSTSVY+ Q+KLPML AL SENIGSLNPGVDRL  S+LLD
Sbjct: 547  IADVSYFVLPDTALDVEAQFRSTSVYLLQKKLPMLSALISENIGSLNPGVDRLAFSMLLD 606

Query: 593  ITDAGDVVDRWVGRAVIQSCCKLSYEHAQFIID----CQISDFYGEDFPKVHGRFEWPDV 648
            +  AGDVVDRW+GR VIQSCCKLSYEHAQ IID     + S F+ + +PK+HGRF WPDV
Sbjct: 607  LNVAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDGAFNFESSSFHEDGYPKLHGRFGWPDV 666

Query: 649  ISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFDENGIPCDITFSERKESNLLVEEYM 708
            I+SLKSLY IS+VLKHKRF  GALRLD PK+ IL DENGIP + TFSE+KESNLL+EEYM
Sbjct: 667  ITSLKSLYEISNVLKHKRFAGGALRLDKPKIVILSDENGIPYNSTFSEQKESNLLIEEYM 726

Query: 709  LLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLELNTSSSGQFHRSLEK 768
            LLAN TAAE+ICRAYPD+ALLRRHPEPNMRKLRE  AFC+KHGL L+TSSSG    SLE+
Sbjct: 727  LLANTTAAEIICRAYPDVALLRRHPEPNMRKLREFTAFCQKHGLNLDTSSSGHIRSSLEQ 786

Query: 769  AKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYALAVPLYTHFTSPLRR 828
             KEKLKDDPVLYDILISYA+K M  ASYFCS DLKDNEHEWGHYALAVPLYTHFTSPLRR
Sbjct: 787  MKEKLKDDPVLYDILISYASKLMQSASYFCSSDLKDNEHEWGHYALAVPLYTHFTSPLRR 846

Query: 829  YPDIIVHRTLLAAIEVEELYMKHQKVMKVNKEVRMQKKCFTGINFEKNAAESMEGREALA 888
            Y DI+VHRTLLA IE EE+Y+K     +V K++ ++K+CFTGINF+K  AES+E REAL 
Sbjct: 847  YADIVVHRTLLATIEAEEIYLK-----QVGKKMGVEKRCFTGINFDKKTAESVECREALM 901

Query: 889  AASMKHGVPCSEVLADIAAYCNERKLASRNVKDACDKLYIWFLLKNKGALISEARVMGLG 948
            AA++KH VP +E+LADIAA+CN+RKLAS+ VKD+C++LY+WFLLK +  ++SEARV+GLG
Sbjct: 902  AAALKHRVPSAEILADIAAHCNDRKLASKYVKDSCERLYMWFLLKQQKVILSEARVLGLG 961

Query: 949  PRFMSIYIQKLAIERRINYAEVEGLKVEWLEATSTLVLSMNP-KHAFRKGS--------- 998
            P+FMSIYIQKLA+E+RI Y EVEGL  EWL+ATSTLVLSM+P K A R+G+         
Sbjct: 962  PKFMSIYIQKLAVEKRIYYDEVEGLTAEWLDATSTLVLSMSPNKRANRRGNWRALSESVM 1021

Query: 999  --------PNMLRAFEEVALVTXXXXXXXXXXXXXXXXXXXXEIEPAVFPLTVRVLSTIP 1050
                      M  + +  A+                      EIEP+ FPLTV +LSTIP
Sbjct: 1022 LACPYDLKVTMDNSNQNDAIEVDAAVSDTDKHHDSTSETSETEIEPSFFPLTVHLLSTIP 1081

Query: 1051 VVLLPVGGDYGPVDIRVRLYMSSYFG 1076
            V L  VGGD GP+D  VRLYM+SYFG
Sbjct: 1082 VALHAVGGDDGPLDFGVRLYMTSYFG 1107


>Medtr5g058810.1 | ribonuclease II family protein | HC |
           chr5:24281512-24288073 | 20130731
          Length = 855

 Score = 1019 bits (2635), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/888 (61%), Positives = 636/888 (71%), Gaps = 94/888 (10%)

Query: 13  QNPSSFSASEVKETPGGSSECLGKNDTPVPSTASLSNPLKQQGTNVYSTNEQVLPQASNF 72
           QNP S SASEV E  G S EC GKN TPV  + S+SN L      +              
Sbjct: 35  QNPPS-SASEVNEAIGVSPECSGKNGTPVQPSGSVSNSLAPSDDPI-------------- 79

Query: 73  VFGSVPPMLINEHVQPV-LQNIQMPGGGIDSISLSDPIGCRGSSGRNSK------TKYPL 125
              S+P +  N  V P  +Q + +    +   +  +P+GC  SSG N K      +K+ L
Sbjct: 80  ---SIPLIPYNGPVAPADMQKMLLHLRTLVLQNSPEPVGCLESSGTNEKKDSARYSKFGL 136

Query: 126 G---KYFSPHWSQEAVEKALERGDVLKARFHVNVHNTLEAYCKIDGVPTDVLINGFLAQN 182
                YFSPHWS E VEKALERGDV KA F VN HN  EAYC IDGVPTD+LI G  AQN
Sbjct: 137 SGQRNYFSPHWSVEVVEKALERGDVFKATFRVNAHNRTEAYCSIDGVPTDILIVGAPAQN 196

Query: 183 RAVEGDIVAVKIDPLPLWTKMKGPIVNGNNMATLESCNL-VEDDGAGVNNCKGIGKVDAD 241
           RAVEGDIVA+KIDPLPLWTKMKGP V  NN A LE CNL VED+ AG NNC+GI KVDAD
Sbjct: 197 RAVEGDIVAIKIDPLPLWTKMKGPNVANNNTAVLEGCNLLVEDNIAGDNNCEGIEKVDAD 256

Query: 242 YESAHSRSPGKNKEDSDDHSSTPDKSSPFPETRCIYEDNTSQGSANHINPLGLASHDGSD 301
           +E +     G+NKE+S D+SS P +S PFPE R IYE+NT+QGS NH++ +GL   D +D
Sbjct: 257 HEYS-----GQNKEESFDNSS-PYRSYPFPEKRYIYENNTTQGSPNHLSLIGLTGRDNND 310

Query: 302 GTHCAASYSLEMNSCNGQGKVINAVEKMCLLVKSFPSKRPTGRVVAIVERSPRREGIVGH 361
           G +C +  S+++NS +GQ +V+NAVEK+CLLV SFPSKRPTGRVVA++ERSPRRE IVGH
Sbjct: 311 GPNCDSPASIKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGRVVAVIERSPRRECIVGH 370

Query: 362 LNDIYCLCCKTYSREITK---------LCEPEYFQLTPIDPKFPSVIILMRDLPECLKKR 412
           LN    +    +S+EI K         + E EY QLTPIDPKFP++++L+RDLP+ +K R
Sbjct: 371 LN----VKQWVFSQEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIMLLVRDLPKSIKIR 426

Query: 413 WECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDAILFQNAICLSEFS 472
            +  D  +E+DLVA QI DW EE PFPEG +L  FGRG E+Q            C  E +
Sbjct: 427 LKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQHFGRGSEIQN-----------CKVELT 475

Query: 473 PEALSCLPCVPWELPPKEIKSRKDLRNLCVF-TIDPSTATDLDDALSIEKLPSGNYRVGV 531
            E                         +C F  IDPSTATDLDDALSIEKLP+GNYRVG+
Sbjct: 476 LE-------------------------ICAFFLIDPSTATDLDDALSIEKLPNGNYRVGI 510

Query: 532 HIADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENIGSLNPGVDRLTVSILL 591
           HIADVSYFVLP TALD EAQ RSTSVY+ Q+KLPML AL SENIGSLNPGVDRL  S+LL
Sbjct: 511 HIADVSYFVLPDTALDVEAQFRSTSVYLLQKKLPMLSALISENIGSLNPGVDRLAFSMLL 570

Query: 592 DITDAGDVVDRWVGRAVIQSCCKLSYEHAQFIID----CQISDFYGEDFPKVHGRFEWPD 647
           D+  AGDVVDRW+GR VIQSCCKLSYEHAQ IID     + S F+ + +PK+HGRF WPD
Sbjct: 571 DLNVAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDGAFNFESSSFHEDGYPKLHGRFGWPD 630

Query: 648 VISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFDENGIPCDITFSERKESNLLVEEY 707
           VI+SLKSLY IS+VLKHKRF  GALRLD PK+ IL DENGIP + TFSE+KESNLL+EEY
Sbjct: 631 VITSLKSLYEISNVLKHKRFAGGALRLDKPKIVILSDENGIPYNSTFSEQKESNLLIEEY 690

Query: 708 MLLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLELNTSSSGQFHRSLE 767
           MLLAN TAAE+ICRAYPD+ALLRRHPEPNMRKLRE  AFC+KHGL L+TSSSG    SLE
Sbjct: 691 MLLANTTAAEIICRAYPDVALLRRHPEPNMRKLREFTAFCQKHGLNLDTSSSGHIRSSLE 750

Query: 768 KAKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYALAVPLYTHFTSPLR 827
           + KEKLKDDPVLYDILISYA+K M  ASYFCS DLKDNEHEWGHYALAVPLYTHFTSPLR
Sbjct: 751 QMKEKLKDDPVLYDILISYASKLMQSASYFCSSDLKDNEHEWGHYALAVPLYTHFTSPLR 810

Query: 828 RYPDIIVHRTLLAAIEVEELYMKHQKVMKVNKEVRMQKKCFTGINFEK 875
           RY DI+VHRTLLA IE EE+Y+K     +V K++ ++K+CFTGINF+K
Sbjct: 811 RYADIVVHRTLLATIEAEEIYLK-----QVGKKMGVEKRCFTGINFDK 853


>Medtr8g073170.1 | exosome complex exonuclease RRP44 | HC |
           chr8:30968594-30949877 | 20130731
          Length = 934

 Score =  302 bits (774), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 184/513 (35%), Positives = 277/513 (53%), Gaps = 46/513 (8%)

Query: 338 SKRPTGRVVAIVERSPRREGIVGHLNDIYCLCCKTYSREITKLCEPEYFQLTPIDPKFPS 397
           S RP+G +V I++R+ +      +   +  +     SR +       Y      D +FP 
Sbjct: 335 SGRPSGCIVGIIKRNWQ-----SYCGSLEPMPIPGGSRGVA------YALFVSKDRRFPK 383

Query: 398 VIILMRDLPECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQL 457
           + I  R L   L KR            + V +D W  +  +P GH +   G+ G+   + 
Sbjct: 384 IRIQTRQLENLLDKR------------IIVSVDSWDRQSRYPSGHYVRTVGKIGDKDTET 431

Query: 458 DAILFQNAICLSEFSPEALSCLPCVPWELPPKE--IKSRKDLRNLCVFTIDPSTATDLDD 515
           + +L +N I    FS + L+CLP +PW +  ++  I  R+DLR+L VF++DP    D+DD
Sbjct: 432 EVVLIENDINSRPFSAQVLACLPPLPWSVSSEDLSIPFRQDLRHLRVFSVDPPGCKDIDD 491

Query: 516 ALSIEKLPSGNYRVGVHIADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENI 575
           AL    LP+GN+ VGVHIADV+ FV P T LD EA  R TSVY+ ++++ MLP   +E++
Sbjct: 492 ALHCIALPNGNFDVGVHIADVTNFVFPGTPLDDEASQRGTSVYLVEKRIDMLPKPLTEDV 551

Query: 576 GSLNPGVDRLTVSILLDITDAGDVVDRWVGRAVIQSCCKLSYEHAQFIIDCQISDFYGED 635
            SL   V+RL  S++ ++T   D++     ++VI+S   LSY  AQ  +D          
Sbjct: 552 CSLRSDVERLAFSVIWEMTPEADIISTRYTKSVIKSAAALSYVEAQARMD---------- 601

Query: 636 FPKVHGRFEWPDVISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFD-ENGIPCDITF 694
                 R   P V + L+++ +++  ++ +R  +GAL L + +V    D E   P DI  
Sbjct: 602 ----DSRLMDP-VTTDLRNMNSLAKKMRLRRIENGALTLASAEVKFQIDTETHNPLDIGI 656

Query: 695 SERKESNLLVEEYMLLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLEL 754
            + KE+N +VEE+ML AN + A+ I +++P  +LLRRHP P    L  L+      GL L
Sbjct: 657 YQIKEANQMVEEFMLAANVSVAQQILKSFPLCSLLRRHPTPTKEMLEPLLRVSAAIGLNL 716

Query: 755 NTSSSGQFHRSLEKAKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYAL 814
           + SSS     SL+ A   + DDP    ++    T+ M  A YFCSGDL  +  E+ HY L
Sbjct: 717 DVSSSKALADSLDHA---VGDDPYFNKLIRILTTRCMSQAVYFCSGDL--SPPEYHHYGL 771

Query: 815 AVPLYTHFTSPLRRYPDIIVHRTLLAAIEVEEL 847
           A PLYTHFTSP+RRY D+IVHR L A+I + +L
Sbjct: 772 ATPLYTHFTSPIRRYADVIVHRLLAASIGISKL 804


>Medtr4g021750.2 | ribonuclease II | HC | chr4:7203751-7191578 |
           20130731
          Length = 555

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 488 PKEIKSRKDLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGVHIADVSYFVLPHTALD 547
           P EI +RK+L NL V+ ID   A +LDDALS  KL  G   + +H+AD + +V P + +D
Sbjct: 145 PDEI-NRKNLTNLKVYAIDVDEADELDDALSATKLQDGRINIWIHVADATRYVQPGSIVD 203

Query: 548 REAQSRSTSVYMSQRKLPMLPALFSENIGSLNPG--VDRLTVSILLDITDAGDVVDRWVG 605
           REA  R TSV++      M P   +    SL  G   + +TVS++L   D G + +  V 
Sbjct: 204 REAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLH--DDGSIAECSVF 261

Query: 606 RAVIQSCCKLSYEHA 620
            +VI+    L+YE A
Sbjct: 262 NSVIKPTYMLTYESA 276


>Medtr4g021750.1 | ribonuclease II | HC | chr4:7207202-7191578 |
           20130731
          Length = 787

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 488 PKEIKSRKDLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGVHIADVSYFVLPHTALD 547
           P EI +RK+L NL V+ ID   A +LDDALS  KL  G   + +H+AD + +V P + +D
Sbjct: 377 PDEI-NRKNLTNLKVYAIDVDEADELDDALSATKLQDGRINIWIHVADATRYVQPGSIVD 435

Query: 548 REAQSRSTSVYMSQRKLPMLPALFSENIGSLNPG--VDRLTVSILLDITDAGDVVDRWVG 605
           REA  R TSV++      M P   +    SL  G   + +TVS++L   D G + +  V 
Sbjct: 436 REAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLH--DDGSIAECSVF 493

Query: 606 RAVIQSCCKLSYEHA 620
            +VI+    L+YE A
Sbjct: 494 NSVIKPTYMLTYESA 508


>Medtr4g021750.3 | ribonuclease II | HC | chr4:7207197-7191693 |
           20130731
          Length = 614

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 488 PKEIKSRKDLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGVHIADVSYFVLPHTALD 547
           P EI +RK+L NL V+ ID   A +LDDALS  KL  G   + +H+AD + +V P + +D
Sbjct: 204 PDEI-NRKNLTNLKVYAIDVDEADELDDALSATKLQDGRINIWIHVADATRYVQPGSIVD 262

Query: 548 REAQSRSTSVYMSQRKLPMLPALFSENIGSLNPG--VDRLTVSILLDITDAGDVVDRWVG 605
           REA  R TSV++      M P   +    SL  G   + +TVS++L   D G + +  V 
Sbjct: 263 REAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLH--DDGSIAECSVF 320

Query: 606 RAVIQSCCKLSYEHA 620
            +VI+    L+YE A
Sbjct: 321 NSVIKPTYMLTYESA 335