Miyakogusa Predicted Gene

Lj0g3v0327759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327759.1 Non Characterized Hit- tr|K3YT65|K3YT65_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017463,25.81,8e-19,TARGET OF MYB1 RELATED (TOM1 - RELATED),
PLANT,NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL;
ENTH,gene.g25583.t1.1
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g097010.1 | ENTH/VHS/GAT family protein | HC | chr7:389582...   221   6e-58
Medtr5g007480.1 | protein transporter | HC | chr5:1376842-137261...   110   2e-24
Medtr8g099600.1 | ENTH/VHS/GAT family protein | HC | chr8:420995...    71   1e-12
Medtr4g077940.1 | protein transporter | HC | chr4:29942899-29940...    62   5e-10
Medtr4g077940.2 | protein transporter | HC | chr4:29943330-29940...    62   6e-10

>Medtr7g097010.1 | ENTH/VHS/GAT family protein | HC |
           chr7:38958252-38953937 | 20130731
          Length = 422

 Score =  221 bits (563), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 173/282 (61%), Gaps = 26/282 (9%)

Query: 1   MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
           +IN  + NG+E++ A+KRKINH+SPIVQ  +LD+LET A+ C+ VFS++ SE VL+DM  
Sbjct: 64  LINAEEFNGSEIVKAIKRKINHKSPIVQKHSLDLLETCAMNCDKVFSEIASEKVLDDMVR 123

Query: 61  FIYNPHADKHNQKKALQLIESWANLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQA 120
            I N   D  N+++A QL+ +W             ESQ    +    ++YMSL GR E  
Sbjct: 124 LIENNQGDGGNRRRAFQLVRAWG------------ESQDIAYLPVFSQTYMSLKGRGESL 171

Query: 121 VTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEA----ELEDSTAAYSPPKYLPM 176
                 S P     +S  S Y H  PLDPPE   +PE       L+DS A +S   + P 
Sbjct: 172 DMTTGNSPPIPYASES--SAYQH--PLDPPERYPVPEAGLHALALDDSAAFFS--DHQPA 225

Query: 177 SNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTTN 236
           S EEKK HLV A++  EL SSI+ SE EP PLKEDLTLSLLD CK SL  +K I+E T N
Sbjct: 226 SAEEKKEHLVVARNSLELLSSILNSEAEPKPLKEDLTLSLLDKCKQSLFLIKEIVESTAN 285

Query: 237 DEVTNIEALYLNDELEQLVSQFDDLEVAQMYGAQQPQNADSA 278
           DE T  EALYLNDEL+QLVS++++LE +    + + Q+ D+A
Sbjct: 286 DEETLFEALYLNDELQQLVSKYEELEAS----SSEAQSVDTA 323


>Medtr5g007480.1 | protein transporter | HC | chr5:1376842-1372618 |
           20130731
          Length = 399

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 140/266 (52%), Gaps = 33/266 (12%)

Query: 1   MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
           +INT ++N  E++ A+K++I  + P VQ LAL +LET    C   FS+V +E VL++M  
Sbjct: 74  LINTEKVNSVELIRAIKKRIMIKIPRVQYLALVLLETVVKNCEKAFSEVAAERVLDEMVR 133

Query: 61  FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQ 119
            I +P    +N+ KAL +IE+W  + G   YL +  E+  S+     +   +   GRD +
Sbjct: 134 VIDDPQTVVNNRNKALVMIEAWGESTGELRYLPVFEETYKSL-----RSRGIRFPGRDNE 188

Query: 120 AVTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELEDSTAAYSPPKYLPM--- 176
           ++      AP                   PP   T+PE   ++D    +   + +P+   
Sbjct: 189 SL------API----------------FTPPRSATVPEPPHVDDIPRQFQ--QDVPVQGY 224

Query: 177 SNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTTN 236
           + E+ K     A++  EL S+++ S  +   L++DLT +L+  C+ S   ++RI+E   +
Sbjct: 225 TEEQTKEAFDIARNSIELLSTVLSSSPQQDVLQDDLTATLVQQCRRSQITVQRIVETAGD 284

Query: 237 DEVTNIEALYLNDELEQLVSQFDDLE 262
           +E    EAL +NDE+ ++++++++L+
Sbjct: 285 NEAILFEALNVNDEILKVLTKYEELK 310


>Medtr8g099600.1 | ENTH/VHS/GAT family protein | HC |
          chr8:42099530-42099727 | 20130731
          Length = 65

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/58 (53%), Positives = 46/58 (79%)

Query: 1  MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDM 58
          +IN  + NG+E++  +KRKINH+SP+VQ  +LD+LET A+ C+ VFS++ SE VL+DM
Sbjct: 8  LINAKEFNGSEIVKVIKRKINHKSPVVQKHSLDLLETVAMNCDKVFSEIASEKVLDDM 65


>Medtr4g077940.1 | protein transporter | HC | chr4:29942899-29940108
           | 20130731
          Length = 414

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 132/267 (49%), Gaps = 22/267 (8%)

Query: 1   MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
           M+N  +L   +V+ A+K++I  +S   Q LAL +LE     C+  F +V +E VL++M  
Sbjct: 74  MVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEALVENCDKGFFEVATERVLDEMVK 133

Query: 61  FIYNP-HADKHNQKKALQLIESWANLGYP-DYLGLLRESQSSMVIDQKKESYMSLIGRDE 118
            + +P  +   +++KAL +I+ W        YL +  E+  S+     K   +   GR+ 
Sbjct: 134 IVDDPDQSFVASKEKALMMIQVWGESNTELRYLPVYEETYKSL-----KSRGIRFPGRNN 188

Query: 119 Q--AVTAARKSAPAALYLDSTLSRYT-HKDPLDPPEGNTIPEEAELEDSTAAYSPPKYLP 175
           +  A       AP+A  +D +L     H   LD    + I    + E+   +  P     
Sbjct: 189 ESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHLI----QRENPVPSLKP----- 239

Query: 176 MSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTT 235
              E+ K     A++  EL SS++ S  +   LK+DLT++L+  C  S + + RI+    
Sbjct: 240 ---EQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQSQSTVHRIIATVG 296

Query: 236 NDEVTNIEALYLNDELEQLVSQFDDLE 262
            +E    EAL +NDE+ +++S++++L+
Sbjct: 297 ENEALLCEALNVNDEIHKVLSKYEELK 323


>Medtr4g077940.2 | protein transporter | HC | chr4:29943330-29940108
           | 20130731
          Length = 441

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 132/267 (49%), Gaps = 22/267 (8%)

Query: 1   MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
           M+N  +L   +V+ A+K++I  +S   Q LAL +LE     C+  F +V +E VL++M  
Sbjct: 101 MVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEALVENCDKGFFEVATERVLDEMVK 160

Query: 61  FIYNP-HADKHNQKKALQLIESWANLGYP-DYLGLLRESQSSMVIDQKKESYMSLIGRDE 118
            + +P  +   +++KAL +I+ W        YL +  E+  S+     K   +   GR+ 
Sbjct: 161 IVDDPDQSFVASKEKALMMIQVWGESNTELRYLPVYEETYKSL-----KSRGIRFPGRNN 215

Query: 119 Q--AVTAARKSAPAALYLDSTLSRYTHKDP-LDPPEGNTIPEEAELEDSTAAYSPPKYLP 175
           +  A       AP+A  +D +L      D  LD    + I    + E+   +  P     
Sbjct: 216 ESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHLI----QRENPVPSLKP----- 266

Query: 176 MSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTT 235
              E+ K     A++  EL SS++ S  +   LK+DLT++L+  C  S + + RI+    
Sbjct: 267 ---EQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQSQSTVHRIIATVG 323

Query: 236 NDEVTNIEALYLNDELEQLVSQFDDLE 262
            +E    EAL +NDE+ +++S++++L+
Sbjct: 324 ENEALLCEALNVNDEIHKVLSKYEELK 350