Miyakogusa Predicted Gene
- Lj0g3v0327699.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0327699.1 Non Characterized Hit- tr|I1KW41|I1KW41_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6581
PE=,43.7,1e-18,FAMILY NOT NAMED,NULL; zf-C3HC4_3,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_2,Zi,CUFF.22303.1
(158 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g447220.1 | calcium-dependent phospholipid-binding copine ... 94 5e-20
Medtr8g447290.1 | MYND finger protein | HC | chr8:18576527-18583... 84 8e-17
Medtr8g447230.1 | MYND finger protein | HC | chr8:18546930-18556... 82 3e-16
Medtr2g063843.1 | calcium-dependent phospholipid-binding copine ... 81 3e-16
Medtr2g063857.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 80 1e-15
Medtr6g092020.1 | calcium-dependent phospholipid-binding copine ... 79 1e-15
Medtr3g096520.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 70 6e-13
Medtr3g096520.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 70 6e-13
Medtr3g096520.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 70 6e-13
Medtr8g089670.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 62 2e-10
Medtr7g033100.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 62 2e-10
Medtr7g033100.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 62 2e-10
Medtr6g021730.4 | E3 ubiquitin-protein ligase RGLG2-like protein... 61 5e-10
Medtr6g021730.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 61 5e-10
Medtr6g021730.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 61 5e-10
Medtr6g021730.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 61 5e-10
Medtr3g086520.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 60 7e-10
Medtr3g086520.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 60 7e-10
Medtr3g086520.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 60 7e-10
Medtr3g075530.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 60 8e-10
Medtr3g075530.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 60 8e-10
>Medtr8g447220.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr8:18538541-18545058 | 20130731
Length = 407
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 46/54 (85%)
Query: 105 DDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFTG 158
DD NQM C ICLTN KDLAFGCGHM+CRDCGSRLS+C ICRQRIT R+ +FTG
Sbjct: 354 DDQRNQMECAICLTNKKDLAFGCGHMTCRDCGSRLSDCPICRQRITNRLRVFTG 407
>Medtr8g447290.1 | MYND finger protein | HC | chr8:18576527-18583638
| 20130731
Length = 511
Score = 83.6 bits (205), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 113 CTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFTG 158
CTICL+N KDLAFGCGHM+CR+CGS++ CHICR++IT R+ LF G
Sbjct: 466 CTICLSNEKDLAFGCGHMTCRECGSKIRKCHICRKKITDRIRLFPG 511
>Medtr8g447230.1 | MYND finger protein | HC | chr8:18546930-18556346
| 20130731
Length = 556
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 113 CTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFTG 158
CTICLTN K++AFGCGHM+CRDCGS+LS C ICR++IT+ + LF G
Sbjct: 511 CTICLTNEKNMAFGCGHMTCRDCGSQLSKCPICREQITSHIKLFPG 556
>Medtr2g063843.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr2:26998751-26994313 | 20130731
Length = 403
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 105 DDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFTG 158
DD C +CLTN KDLAFGCGHM+CRDCGSRL +C ICR RIT+R+ +++G
Sbjct: 350 DDQNQSACCPVCLTNAKDLAFGCGHMTCRDCGSRLRHCPICRHRITSRLRVYSG 403
>Medtr2g063857.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr2:27010417-27015032 | 20130731
Length = 417
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%)
Query: 105 DDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFTG 158
DD C +CLTN KDLAFGCGHM+CRDCGSRL +C ICR RIT+R+ ++ G
Sbjct: 364 DDHNQSACCPVCLTNAKDLAFGCGHMTCRDCGSRLRDCPICRVRITSRLRVYNG 417
>Medtr6g092020.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr6:34700782-34696694 | 20130731
Length = 396
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 113 CTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFTG 158
C +CLTN KDLAFGCGHM+CRDCGSRL +C ICR RIT+R+ +++G
Sbjct: 351 CPVCLTNAKDLAFGCGHMTCRDCGSRLRHCPICRHRITSRLRVYSG 396
>Medtr3g096520.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:44128294-44132918 | 20130731
Length = 455
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFT 157
VC ICLTN KD+AFGCGH +C++CG+ LS C +CRQ+IT R+ L+T
Sbjct: 410 VCPICLTNPKDMAFGCGHTTCKECGATLSLCPMCRQQITTRLRLYT 455
>Medtr3g096520.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:44128276-44132925 | 20130731
Length = 438
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFT 157
VC ICLTN KD+AFGCGH +C++CG+ LS C +CRQ+IT R+ L+T
Sbjct: 393 VCPICLTNPKDMAFGCGHTTCKECGATLSLCPMCRQQITTRLRLYT 438
>Medtr3g096520.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:44128294-44132918 | 20130731
Length = 437
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFT 157
VC ICLTN KD+AFGCGH +C++CG+ LS C +CRQ+IT R+ L+T
Sbjct: 392 VCPICLTNPKDMAFGCGHTTCKECGATLSLCPMCRQQITTRLRLYT 437
>Medtr8g089670.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr8:37321067-37317146 | 20130731
Length = 475
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
VC ICLTN KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 431 VCPICLTNAKDMAFGCGHQTCCECGESLEFCPICRSTIDTRIKLY 475
>Medtr7g033100.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr7:11691860-11685758 | 20130731
Length = 445
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 86 PVEDEPSNPNQLDKNTLPEDDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHIC 145
P+ PS P+ N L C ICLTN KD+AFGCGH +C +CG L +C IC
Sbjct: 385 PMGTAPSAPSSTYDNQL----------CPICLTNTKDMAFGCGHQTCCECGKELKSCPIC 434
Query: 146 RQRITARVMLF 156
R I R+ L+
Sbjct: 435 RSCINTRIKLY 445
>Medtr7g033100.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr7:11691746-11685758 | 20130731
Length = 445
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 86 PVEDEPSNPNQLDKNTLPEDDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHIC 145
P+ PS P+ N L C ICLTN KD+AFGCGH +C +CG L +C IC
Sbjct: 385 PMGTAPSAPSSTYDNQL----------CPICLTNTKDMAFGCGHQTCCECGKELKSCPIC 434
Query: 146 RQRITARVMLF 156
R I R+ L+
Sbjct: 435 RSCINTRIKLY 445
>Medtr6g021730.4 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471535-7476086 | 20130731
Length = 486
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 101 TLPEDDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ P NQ+ C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 432 SAPSSTYENQL-CPICLSNEKDMAFGCGHQTCCECGQDLQTCPICRSPINTRIKLY 486
>Medtr6g021730.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471024-7476055 | 20130731
Length = 486
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 101 TLPEDDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ P NQ+ C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 432 SAPSSTYENQL-CPICLSNEKDMAFGCGHQTCCECGQDLQTCPICRSPINTRIKLY 486
>Medtr6g021730.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471024-7476041 | 20130731
Length = 486
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 101 TLPEDDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ P NQ+ C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 432 SAPSSTYENQL-CPICLSNEKDMAFGCGHQTCCECGQDLQTCPICRSPINTRIKLY 486
>Medtr6g021730.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471024-7476055 | 20130731
Length = 486
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 101 TLPEDDPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ P NQ+ C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 432 SAPSSTYENQL-CPICLSNEKDMAFGCGHQTCCECGQDLQTCPICRSPINTRIKLY 486
>Medtr3g086520.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:39204814-39200567 | 20130731
Length = 467
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
VC ICLT+ KD+AFGCGH +C CG L C ICR IT ++ L+
Sbjct: 423 VCPICLTDAKDMAFGCGHQTCCGCGEDLEFCPICRSTITTKIKLY 467
>Medtr3g086520.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:39204807-39200567 | 20130731
Length = 470
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
VC ICLT+ KD+AFGCGH +C CG L C ICR IT ++ L+
Sbjct: 426 VCPICLTDAKDMAFGCGHQTCCGCGEDLEFCPICRSTITTKIKLY 470
>Medtr3g086520.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:39204931-39200567 | 20130731
Length = 470
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
VC ICLT+ KD+AFGCGH +C CG L C ICR IT ++ L+
Sbjct: 426 VCPICLTDAKDMAFGCGHQTCCGCGEDLEFCPICRSTITTKIKLY 470
>Medtr3g075530.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:34395358-34390998 | 20130731
Length = 435
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 PSNPNQLDK-NTLPEDDPA-NQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQR 148
PS P+Q T P A + C ICLTN KD+AFGCGH +C +CG L C ICR
Sbjct: 368 PSAPSQKHGVTTNPHTSSASDNQFCPICLTNPKDMAFGCGHQTCCECGQDLQLCPICRSS 427
Query: 149 ITARVMLF 156
I R+ L+
Sbjct: 428 INTRIKLY 435
>Medtr3g075530.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:34395116-34390998 | 20130731
Length = 435
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 PSNPNQLDK-NTLPEDDPA-NQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQR 148
PS P+Q T P A + C ICLTN KD+AFGCGH +C +CG L C ICR
Sbjct: 368 PSAPSQKHGVTTNPHTSSASDNQFCPICLTNPKDMAFGCGHQTCCECGQDLQLCPICRSS 427
Query: 149 ITARVMLF 156
I R+ L+
Sbjct: 428 INTRIKLY 435