Miyakogusa Predicted Gene

Lj0g3v0327589.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327589.1 Non Characterized Hit- tr|K3YZQ4|K3YZQ4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si019764,41.13,8e-18,Sad1_UNC,Sad1/UNC-like, C-terminal;
UNCHARACTERIZED,NULL; SAD1/UNC-84-LIKE PROTEIN-RELATED,NULL;
seg,CUFF.22296.1
         (247 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g043510.1 | Sad1/UNC-like protein | HC | chr8:16709394-167...   318   2e-87
Medtr4g097660.1 | hypothetical protein | HC | chr4:40316247-4031...    59   4e-09
Medtr4g097690.1 | SAD1/UNC-84 domain protein, putative | LC | ch...    58   8e-09

>Medtr8g043510.1 | Sad1/UNC-like protein | HC |
           chr8:16709394-16703792 | 20130731
          Length = 462

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/214 (72%), Positives = 181/214 (84%), Gaps = 2/214 (0%)

Query: 1   MEGLLKNTARMIQVQVDVMDKKIEDGVSGLRKEFDVKIEEKGAYLEGELKNLESKGEKLE 60
           MEGLLK TA+M+QVQVDV+DKKI + V GL+KE D KIE+KGA+LE E+K L +KG+KLE
Sbjct: 157 MEGLLKKTAKMMQVQVDVVDKKIGNEVGGLKKEMDAKIEQKGAFLENEIKKLANKGDKLE 216

Query: 61  RYLSELKAENWLSKEEFEKFVVDLRKVKGNGYEGGGLDEIREFAKGVIRKEIEKHAADGL 120
           RYL ELK E+ L+KEEFEKFV  L+ VKGNGYEGGGLDEIREFA+GV+  EIEKHAADGL
Sbjct: 217 RYLEELKVEDLLTKEEFEKFVEGLKNVKGNGYEGGGLDEIREFARGVVESEIEKHAADGL 276

Query: 121 GMVDYALGSGGAAVVRHSEPYDVRRGNW--LSLLSSVHPNADKMLKPSFGEPGQCFPLKG 178
           G VDYAL +GGA VVRHSE YDV+RGNW  L+  + VH NADKMLKPSFGEPGQCFPLKG
Sbjct: 277 GRVDYALANGGAWVVRHSEAYDVQRGNWFLLNARNGVHHNADKMLKPSFGEPGQCFPLKG 336

Query: 179 SSGFVQIRLRTDIIPEAVTLEHIAKVMQFIHSKS 212
           SSGFVQIRLR +I+PEAVTLEH+AK + +  S +
Sbjct: 337 SSGFVQIRLRAEIVPEAVTLEHVAKSVAYDRSSA 370


>Medtr4g097660.1 | hypothetical protein | HC |
           chr4:40316247-40316755 | 20130731
          Length = 144

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 32/47 (68%)

Query: 109 RKEIEKHAADGLGMVDYALGSGGAAVVRHSEPYDVRRGNWLSLLSSV 155
           R  +  HA DGLG VDYA+ +GGA VVRHSE YDV  GNW  L S +
Sbjct: 92  RSRLGYHAVDGLGRVDYAIENGGAFVVRHSEAYDVWLGNWFLLNSEL 138


>Medtr4g097690.1 | SAD1/UNC-84 domain protein, putative | LC |
           chr4:40326653-40326829 | 20130731
          Length = 58

 Score = 58.2 bits (139), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 32/47 (68%)

Query: 109 RKEIEKHAADGLGMVDYALGSGGAAVVRHSEPYDVRRGNWLSLLSSV 155
           R  +  HA DGLG VDYA+ +GGA VVRHSE YDV  GNW  L S +
Sbjct: 6   RSRLGYHAVDGLGRVDYAIENGGAFVVRHSEAYDVWLGNWFLLNSEL 52