Miyakogusa Predicted Gene

Lj0g3v0327449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327449.1 Non Characterized Hit- tr|D8SUX5|D8SUX5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,33.08,3e-16,DUF842,Protein of unknown function DUF842,
eukaryotic; UNCHARACTERIZED,Protein of unknown function D,CUFF.22286.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g009130.1 | DUF842 domain protein | HC | chr3:1796427-1802...   245   9e-66

>Medtr3g009130.1 | DUF842 domain protein | HC | chr3:1796427-1802951
           | 20130731
          Length = 152

 Score =  245 bits (626), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 118/146 (80%), Positives = 136/146 (93%)

Query: 1   MDHFAAAEEQIASQKLRQKLDEVNVAAQANLAPIQDHVNYTLQKAYFKCAYECFDRRRRQ 60
           MDHFAAAE Q+A Q++RQKL+EVN AAQ NLAP+QDHVNYTLQKAYFKCAYECFDR R+Q
Sbjct: 1   MDHFAAAEAQLAQQRIRQKLEEVNQAAQTNLAPVQDHVNYTLQKAYFKCAYECFDRSRKQ 60

Query: 61  EEITNCVENCSVPLANVQQTFDHEMASFQEKLNRSLMVCQDKFEAAKLQQKAGATTDMIS 120
           EEI+NCVENCS+PL+NVQQTF++EMA FQEKLNRS+MVCQDK+E +KLQQK GA  DMIS
Sbjct: 61  EEISNCVENCSIPLSNVQQTFENEMAKFQEKLNRSMMVCQDKYEGSKLQQKPGAMNDMIS 120

Query: 121 CADQAIQDSIKMLPILTNRLKSSFGI 146
           CAD+AIQDSIKMLP+LTN+LK+SFGI
Sbjct: 121 CADEAIQDSIKMLPLLTNKLKASFGI 146