Miyakogusa Predicted Gene
- Lj0g3v0327109.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0327109.3 Non Characterized Hit- tr|I3S7S2|I3S7S2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,30.5,5e-18,no
description,Nucleic acid-binding, OB-fold; Nucleic acid-binding
proteins,Nucleic acid-binding, OB,CUFF.22661.3
(207 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20... 117 1e-26
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 107 6e-24
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 98 7e-21
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 92 4e-19
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076... 92 4e-19
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647... 88 7e-18
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 87 9e-18
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 87 1e-17
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 86 2e-17
Medtr2g062200.1 | DUF223 domain protein | LC | chr2:26248587-262... 79 3e-15
Medtr8g062060.1 | DUF223 domain protein | LC | chr8:25911934-259... 76 2e-14
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 76 3e-14
Medtr1g085690.1 | DUF223 domain protein | HC | chr1:38294818-382... 73 2e-13
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416... 73 2e-13
Medtr3g056240.1 | DUF223 domain protein | HC | chr3:22396065-223... 72 3e-13
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 71 5e-13
Medtr2g048550.1 | replication factor-A carboxy-terminal domain p... 69 2e-12
Medtr4g028320.1 | animal RPA1 domain protein | LC | chr4:9767872... 69 3e-12
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908... 69 4e-12
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183... 69 4e-12
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014... 69 4e-12
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 69 5e-12
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 68 5e-12
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 68 5e-12
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 68 6e-12
Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268... 67 1e-11
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 66 2e-11
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 66 2e-11
Medtr4g046077.1 | replication factor-A carboxy-terminal domain p... 65 5e-11
Medtr2g054710.1 | animal RPA1 domain protein | LC | chr2:2336383... 64 7e-11
Medtr3g044760.1 | DUF223 domain protein | LC | chr3:14435139-144... 63 2e-10
Medtr3g084550.1 | DUF223 domain protein | LC | chr3:38189762-381... 63 2e-10
Medtr7g093810.1 | animal RPA1 domain protein | HC | chr7:3731542... 62 3e-10
Medtr5g085220.1 | animal RPA1 domain protein | LC | chr5:3678902... 62 4e-10
Medtr0042s0170.1 | replication factor-A carboxy-terminal domain ... 62 4e-10
Medtr6g069230.1 | animal RPA1 domain protein | LC | chr6:2491560... 62 4e-10
Medtr3g037500.1 | transmembrane protein, putative | LC | chr3:13... 62 4e-10
Medtr1g072220.1 | DUF223 domain protein | LC | chr1:32050688-320... 62 5e-10
Medtr5g055160.1 | animal RPA1 domain protein | LC | chr5:2272064... 60 2e-09
Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944... 57 2e-08
Medtr4g071730.1 | hypothetical protein | LC | chr4:27152365-2715... 56 2e-08
Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517... 54 7e-08
Medtr1g052715.1 | DUF223 domain protein | LC | chr1:21677037-216... 54 1e-07
Medtr2g099880.1 | DUF223 domain protein | LC | chr2:42842228-428... 53 2e-07
Medtr8g078450.1 | DUF223 domain protein | LC | chr8:33442410-334... 52 3e-07
Medtr5g007120.1 | transmembrane protein, putative | HC | chr5:12... 52 5e-07
Medtr2g032570.1 | animal RPA1 domain protein | LC | chr2:1225599... 51 6e-07
Medtr1g050500.1 | replication factor-A carboxy-terminal domain p... 51 7e-07
Medtr6g051880.1 | hypothetical protein | LC | chr6:18064569-1806... 51 8e-07
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 51 1e-06
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 50 1e-06
Medtr7g104000.1 | animal RPA1 domain protein | HC | chr7:4204740... 49 3e-06
Medtr7g032985.1 | hypothetical protein | HC | chr7:11639908-1163... 49 3e-06
Medtr5g056060.1 | transmembrane protein, putative | HC | chr5:23... 49 4e-06
Medtr3g067530.1 | DUF223 domain protein | LC | chr3:30107700-301... 49 4e-06
Medtr8g461360.1 | DUF223 domain protein | LC | chr8:21582245-215... 47 1e-05
>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
20130731
Length = 665
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+L+D+ G KI A++ ++ + + G+VY +S+F V+LN G R T H ++LIF
Sbjct: 40 MVLIDQNGVKIHATIPKQLMYLFQHKLIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQM 99
Query: 58 CTSVAESFDVRI---PRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQL 114
T V ES D I P +G + + I +R D+ +L+D +G+++ E+ F++D +L
Sbjct: 100 KTKVEESHDYEISLIPNHGLTLTDISQITSRTQDYEYLVDVIGLMTGISAEREFVRDGKL 159
Query: 115 TKMLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTP----- 169
TK+L I+L D GK C L G+ V+ + ++ PVI QF KVK F+G
Sbjct: 160 TKILVIELTDHSGKCECTLFGNYVDELHKLMSKAVEGSPVIVIQFAKVKIFRGKASIQNV 219
Query: 170 --VSSKVHFNPNIHDAIELTK 188
+++++ NP+ +A++ +
Sbjct: 220 VGSTTRIYLNPSFPEALKFKE 240
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+L+D+ G KIQA V ++ + + + G VYNIS+F V + G R H ++++F
Sbjct: 44 MVLLDQMGVKIQAIVRKQLIYVFQKRLREGEVYNISYFSVAPSTGSYRAATHPYKIVFQM 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V IP G SF + + N ++ +L+D +G+++A +E+ +++D +TKM
Sbjct: 104 TTKVQSCTSATIPLYGLSFTSIVDVSNHTVEYDYLVDVMGLVTAVSEEREYVRDGSVTKM 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ ++ D GKI C L G V + +++ + PV+ QF KVK F+ +
Sbjct: 164 IIFEVTDHSGKIECALFGEYVALWNGFVSKGFEGLPVVVVQFAKVKIFRDKATLQNVKGT 223
Query: 172 SKVHFNPNIHDAIELTKSL 190
+++ NP++ + I L
Sbjct: 224 TRLIVNPDVPEVIAFKDRL 242
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+L+D GTKI ASV ++ + + G+VY +S F V + G R T H ++++F
Sbjct: 44 MVLIDEMGTKIHASVRKQLFYVFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQM 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V IP G S + SD +L+D LG ++ E+ +++D ++TKM
Sbjct: 104 TTKVQACEGASIPSLGISLCKIADVCQHTSDHDYLVDVLGFMTGISVEREYVRDGKVTKM 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ ++ D+ GK C L G V+ + + + P+I QF KVK F+ +
Sbjct: 164 VIFEITDASGKCECALFGQYVDTLNKLMGKSGGGMPIILVQFAKVKIFRDKASLQNVMNT 223
Query: 172 SKVHFNPNIHDAIELTKSL 190
+++ NP I A ++ KS+
Sbjct: 224 TRILINPPIEQADQIRKSV 242
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGTY--- 160
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ +C L G V + +L+S ++ V+A KVK F+G P S
Sbjct: 161 ----------RFKCTLFGEYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSS 210
Query: 172 SKVHFNPNIHDAIELTKSL 190
+++ FNP I + EL KS
Sbjct: 211 TRITFNPEIGETKELRKSF 229
>Medtr6g039240.1 | animal RPA1 domain protein | LC |
chr6:14180761-14182238 | 20130731
Length = 289
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGTY--- 160
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ +C L G V + +L+S ++ V+A KVK F+G P S
Sbjct: 161 ----------RFKCTLFGEYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSS 210
Query: 172 SKVHFNPNIHDAIELTKSL 190
+++ FNP I + EL KS
Sbjct: 211 TRITFNPEIGETKELRKSF 229
>Medtr1g094230.1 | animal RPA1 domain protein | LC |
chr1:42436471-42437983 | 20130731
Length = 303
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 22/199 (11%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGTY--- 160
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ +C L G V + +L+S ++ V+A KVK F+G P
Sbjct: 161 ----------RFKCTLFGEYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALRNAFSY 210
Query: 172 SKVHFNPNIHDAIELTKSL 190
+++ FNP + + E+ KS
Sbjct: 211 TRITFNPEMGETKEIRKSF 229
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+LMD +G +I ASV R + + + RV++I +F V N G R H +++ F
Sbjct: 44 MVLMDNKGDRINASVRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQY 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T + + D +P + + +++ I D +LID +G++ A G EK + ++ +KM
Sbjct: 104 GTKIKQCDDKFVPADIYVIGDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKM 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ I+L + + L G V+ + +LAS T+ V+A K+K F+G +
Sbjct: 164 IPIELDYDGFRFKVTLFGPYVDELNAFLASGETENVVVAVLLTKIKIFQGQATIQNTINA 223
Query: 172 SKVHFNPNIHDAIELTKSL 190
+KV FNP A+ L K +
Sbjct: 224 TKVLFNPTFTAALLLKKRM 242
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 9/197 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
+L+DR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 FVLIDRKGDQIGASIRRTLIYKFKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S + +P N +SF + N D +L+D +GVI G E+ + ++ TKM
Sbjct: 104 NTKVKLSKTILVPINVYSFTPAPDVFNESYDNNYLVDVIGVIIGVGVEREYEREGTKTKM 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
I+L + + +C L G V + L+S+ ++ V+A KVK F+G P S
Sbjct: 164 NVIELDSNGYRFKCTLFGEYVEELNSLLSSDESQNVVVAIMLTKVKLFQGKPALQNALSS 223
Query: 172 SKVHFNPNIHDAIELTK 188
+++ FNP I + EL K
Sbjct: 224 TRITFNPEIGETKELRK 240
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 8 GTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAES 64
GTKI A V ++ + + G+VY +S F V + G R T H ++++F T V
Sbjct: 45 GTKIHAGVRKQLLYVFQSKLSEGKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQVC 104
Query: 65 FDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQD 124
D IP G S + SD +L+D LG ++ E+ +++D ++TKM+ ++ D
Sbjct: 105 EDASIPSFGISLCKIVDVCQHTSDHDYLVDVLGFMTDISAEREYVRDGKVTKMVVFEITD 164
Query: 125 SRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFK 166
+ GK C L G V+ + + + P+I QF KVK F+
Sbjct: 165 ASGKCECALFGQYVDTLNKLMGKSAGGMPIILVQFAKVKIFR 206
>Medtr2g062200.1 | DUF223 domain protein | LC |
chr2:26248587-26247742 | 20130731
Length = 185
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+LMD G KI A+V R + + ++ G+VY++S F V N G R T H+++L F
Sbjct: 1 MVLMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQF 60
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V +P + + N+ ++ N D +L+D +G+++ G ++ + ++ TKM
Sbjct: 61 NTKVKLCGKNSVPDDIYPISNSIVVFNSEYDTDYLVDVMGMLTGVGMQREYERNGAKTKM 120
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGT 168
+ + L K + L G + + ++A+ T + ++ KVK ++G
Sbjct: 121 VAMKLNYDGFKFKVTLFGQYADELNAFVAAGETNKVIVVVLLAKVKIWQGN 171
>Medtr8g062060.1 | DUF223 domain protein | LC |
chr8:25911934-25914219 | 20130731
Length = 530
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 1 MILMDRRGTKIQASV---CR---RHPITRPIEVGRVYNISHFKVVLN-DGIRLTPHDFRL 53
++LMD G ++ A+V C RH + RVY I+ F V+ N D T +R+
Sbjct: 44 LLLMDIEGYRMHATVPPFCVEKFRHMLVE----NRVYIITMFSVLPNLDEFMSTSSAYRI 99
Query: 54 IFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQ 113
+FH T + + IP S + + + ++ +D +G+++A E +
Sbjct: 100 VFHQDTDLMATTCSAIPECRLSLITSADLLKKTRGCSYAVDVIGLLTAMHHEYFLDSTNH 159
Query: 114 LTKMLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPVS-- 171
L+ +L +L D R K C L G + I + L + P++ QF +V + GTPV
Sbjct: 160 LSSVLKFELTDERTKFECALTGKYIGIFHELLKKVQLRLPIVVIQFARVIAENGTPVVCA 219
Query: 172 ----SKVHFNPNIHDAIELTKSL 190
+KV FNP I + + L
Sbjct: 220 EKDITKVSFNPTIPEVTQFQDRL 242
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+LMD G++I AS+ + + I G+VY+ + V N G + T H ++L F
Sbjct: 44 MVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQF 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T F + + + F I D +L+D +G+++ G E+ + ++ TK+
Sbjct: 104 GTKCLPLFGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKL 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFK 166
I ++ K++C L G+ V+ + +LA+ T V++ Q KVK K
Sbjct: 164 NVIAMEADGYKLQCTLFGTYVDKLNTFLATGETANVVVSIQLAKVKGSK 212
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 7 RGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAE 63
+G+KI AS+ + + I G+VY+ + V N G + T H ++L T
Sbjct: 209 KGSKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNVQFGTKCLP 268
Query: 64 SFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQ 123
+ + + F I D +L+D +G+++ G E+ + ++ TK+ I ++
Sbjct: 269 LCGALVSGSDFKFVPIFDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAME 328
Query: 124 DSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFK 166
K++C L G+ V+ + +LA+ T V++ Q KVK F+
Sbjct: 329 ADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQ 371
>Medtr1g085690.1 | DUF223 domain protein | HC |
chr1:38294818-38296141 | 20130731
Length = 233
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 40/199 (20%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R+ + ++ G V+ IS F V N G R + ++++L F
Sbjct: 3 LVLMDRKGDRIGASIRRKLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTI 62
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+
Sbjct: 63 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVGTY--------------------- 101
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------S 171
+ +C L G V + +L+S ++ V+A KVK F+G P S
Sbjct: 102 ----------RFKCTLFGEYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSS 151
Query: 172 SKVHFNPNIHDAIELTKSL 190
+++ FNP I + EL KS
Sbjct: 152 TRITFNPEIGETKELRKSF 170
>Medtr7g089660.1 | animal RPA1 domain protein | LC |
chr7:35114160-35121568 | 20130731
Length = 236
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++L+DR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLIDRKGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G EK + +D
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPNVFNESYDNNYLVDVIGVMIGVGVEKEYERDGTY--- 160
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPVSSKVHF 176
+ +C L G V + +L+S ++ V+A KVK F+ V K +
Sbjct: 161 ----------RFKCTLFGEYVEELNSFLSSGESQNVVVAIMLTKVKLFQAFLVQYKFSY 209
>Medtr3g056240.1 | DUF223 domain protein | HC |
chr3:22396065-22393475 | 20130731
Length = 323
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+LMD G++I AS+ + + I G+VY+ + V N G + T H ++L F
Sbjct: 44 MVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQF 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T + + + F I D +L+D +G+++ G E+ + ++ TK+
Sbjct: 104 GTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKL 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSF 165
I ++ K++C L G+ V+ + +LA+ T V++ Q KVK F
Sbjct: 164 NVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKRF 211
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDGIRLTPH-DFRLIFHT 57
M+LMD G++I AS+ + + I G+VY+ + V N G T H ++L F
Sbjct: 44 MVLMDSEGSRIHASIKKTLLYKFQSEIREGKVYSFENMGVAANGGSYKTTHYPYKLNFQF 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T + + + F I D +L+D +G+++ G E+ + ++ TK+
Sbjct: 104 GTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKL 163
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFK 166
I ++ K++C L G+ V+ + +LA+ T V++ Q KVK F+
Sbjct: 164 NVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQ 212
>Medtr2g048550.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21410361-21406613 | 20130731
Length = 495
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 15/219 (6%)
Query: 1 MILMDRRGTKIQASV-----CRRHPITRPIEVGRVYNISHFKVVLNDGI-RLTPHDFRLI 54
M+LMD G KI ASV + H + I+ +Y +S+ KV N GI R TPH + L+
Sbjct: 44 MVLMDSYGEKIHASVHSSLYWKFHDL---IKENNIYIVSNVKVDRNVGIMRTTPHPYVLL 100
Query: 55 FHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQL 114
F T V +++ + + F + Q+ + D L D +G+++ +K+ + +
Sbjct: 101 FQMNTRVKKAYFADVGPEFYRFNDPQMYFDTAYDRDCLGDVIGMLTDVRVKKIDAEGAAC 160
Query: 115 TKMLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKV------KSFKGT 168
K+ I++ I+C L G+ V+ + +++A ++A F KV K T
Sbjct: 161 DKLAIIEMNHEGCFIQCSLFGTFVDQLNNFVAKGDISNVIVAVLFAKVEYVIAGKLVIST 220
Query: 169 PVSSKVHFNPNIHDAIELTKSLRTKAFLKGSIMRTLKTV 207
SK+ FNP AI+L S+ K L +R + V
Sbjct: 221 VTGSKLVFNPLFTTAIDLKGSMMYKRPLTTPSIRIMDDV 259
>Medtr4g028320.1 | animal RPA1 domain protein | LC |
chr4:9767872-9767142 | 20130731
Length = 153
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 25 LVLMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTI 84
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + + N D L+D +GV++ G E+ + +D TKM
Sbjct: 85 NTKVKLSKTVLVPTNVYSFTSAYDVFNESYDNNFLVDVIGVMTGVGVEREYERDGVKTKM 144
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 145 NVIEL-DSNG 153
>Medtr8g036090.1 | animal RPA1 domain protein | HC |
chr8:13279086-13278300 | 20130731
Length = 172
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr4g471610.1 | animal RPA1 domain protein | HC |
chr4:27071837-27072623 | 20130731
Length = 172
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr3g078440.1 | animal RPA1 domain protein | HC |
chr3:35350146-35349360 | 20130731
Length = 172
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+++D G +I AS+ + + + G+ ++ + V N G R T H ++L F
Sbjct: 46 MVILDEAGDRIHASLKKTLIYKFRNDLFEGKCFSFENMGVANNGGGYRTTKHTYKLNFQL 105
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
+ V + I ++ + + D +L+D +GV++ G E+ ++ +TK+
Sbjct: 106 SSKVKYLPALTITKSPYQLVPISEVIGGTYDTDYLVDIIGVLTGVGSERELERNGNMTKL 165
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSF------KGTPVS 171
I+L+ KI+C L GS V+ + ++AS ++ Q K KSF +
Sbjct: 166 NVIELEAGGFKIQCTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGC 225
Query: 172 SKVHFNPNIHDAIELTKSL 190
+KV F P A+ + L
Sbjct: 226 TKVIFKPTCDAAVSMRNRL 244
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LMDR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+++D G +I AS+ + + + G+ ++ + V N G R T H ++L F
Sbjct: 46 MVILDEAGDRIHASLKKTLIYKFRNDLFEGKCFSFENMGVANNGGGYRTTKHTYKLNFQF 105
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
+ V + I ++ + + D +L+D +GV++ G E+ ++ +TK+
Sbjct: 106 SSKVKYLPALTITKSPYQLVPISEVIGGTYDTDYLVDIIGVLTGVGSERELERNGNMTKL 165
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSF------KGTPVS 171
I+L+ KI+C L GS V+ + ++AS ++ Q K KSF +
Sbjct: 166 NVIELEAGGFKIQCTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGC 225
Query: 172 SKVHFNPNIHDAIELTKSL 190
+KV F P A+ + L
Sbjct: 226 TKVIFKPTCDAAVSMRNRL 244
>Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268124
| 20130731
Length = 272
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 33/192 (17%)
Query: 8 GTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLN-DGIRLTPHDFRLIFHTCTSVAES 64
G +I AS+ R + ++ G V+ IS F V N D R + +++L F T V S
Sbjct: 45 GDQIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLS 104
Query: 65 FDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQD 124
V +P N +SF + N D +L+D +GV+ G E+ + +D + ++
Sbjct: 105 ITVLVPTNVYSFTPAPDVFNEFYDNNYLVDVIGVMIGVGVEREYERDEYVEEL------- 157
Query: 125 SRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------SSKVHFNP 178
+L+S ++ V+A KVK F+G P S+++ FNP
Sbjct: 158 -----------------NSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSSTRITFNP 200
Query: 179 NIHDAIELTKSL 190
I + EL KS
Sbjct: 201 EIGETKELRKSF 212
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++L+DR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLIDRKGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G EK + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++L+DR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLIDRKGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G EK + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr4g046077.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:16158485-16160769 | 20130731
Length = 405
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 61 VAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHI 120
V+ESF IP+ G S + D+ +L+D +G+++ E+ +I+D ++TKM+
Sbjct: 7 VSESF--TIPKYGVSLTKLVDVCAHTYDYDYLVDVVGLMTGISNEREYIRDGKVTKMVVF 64
Query: 121 DLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKG 167
L D G C L G V+ + + PV+ QF KVK FKG
Sbjct: 65 QLTDDSGSCECALFGKYVDALNKLMRKAVDGMPVVLVQFAKVKIFKG 111
>Medtr2g054710.1 | animal RPA1 domain protein | LC |
chr2:23363838-23365033 | 20130731
Length = 271
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+++D G +I AS+ + + + G+ ++ + V N G R T H ++L F
Sbjct: 46 MVILDEAGDRIHASLKKTLIYKFRNDLFEGKCFSFENMGVTNNGGGYRTTKHTYKLNFQF 105
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
+ V + I ++ + D +L+D +GV++ G E+ ++ +TK+
Sbjct: 106 SSKVKYLPALTITKSPYQLVPISEFIGGTYDTDYLVDIIGVLTGVGSERERERNGNMTKL 165
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPVSSKVHFN 177
I+L+ KI+C GS V+ + ++AS + ++ Q K KSF+ K+H
Sbjct: 166 NVIELEAGGFKIQCTFFGSYVDDLNSFIASGDIQNAMVIIQLAKAKSFQ-----DKIH-- 218
Query: 178 PNIHDAIELTK 188
I + I TK
Sbjct: 219 --IQNCIGCTK 227
>Medtr3g044760.1 | DUF223 domain protein | LC |
chr3:14435139-14437639 | 20130731
Length = 444
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 1 MILMDRRGTKIQASV---CRRHPITRPIEVGRVYNISHFKVVLND-GIRLTPHDFRLIFH 56
M+L+D+ G +IQA++ C RVY S+FKV+ ND R+T H+ RL
Sbjct: 44 MVLLDQDGNRIQATIPPDCVDR-FQNTFHENRVYMFSNFKVLPNDRSTRVTSHNHRLKLW 102
Query: 57 TCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTK 116
T V I R G+SF+++ I HLID G++++ + + L
Sbjct: 103 EETVVVNHDGYIIQRFGFSFFSSAQILEHQHGCGHLIDVFGLLTSLHYDFVVDARQNLAT 162
Query: 117 MLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKV 162
+ +RG I C+L G + L+ + PV+ QF K+
Sbjct: 163 I-------ARGTIECVLYGRFIGFFKGLLSRFGSALPVVVIQFAKI 201
>Medtr3g084550.1 | DUF223 domain protein | LC |
chr3:38189762-38189098 | 20130731
Length = 131
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDGI-RLTPHDFRLIFHT 57
++LMDR+G +I S+ R + ++ G V+ IS V N G+ R + ++++L F
Sbjct: 3 LVLMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSGLYRPSRNEYKLNFTI 62
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + D TKM
Sbjct: 63 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYETDGVKTKM 122
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 123 NVIEL-DSNG 131
>Medtr7g093810.1 | animal RPA1 domain protein | HC |
chr7:37315424-37314639 | 20130731
Length = 172
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++L+DR+G +I AS+ R + ++ V+ IS F V N G R + ++++L F
Sbjct: 44 LVLIDRKGDRIGASIRRTLIYKFKNQLQERMVFTISSFNVASNIGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G EK + +D TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKM 163
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 164 NVIEL-DSNG 172
>Medtr5g085220.1 | animal RPA1 domain protein | LC |
chr5:36789021-36788235 | 20130731
Length = 172
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++L+DR+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLIDRKGDRIGASIRRILIYKFKEQLQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D L+D +GV+ G E+ + +DS TKM
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNCLVDVIGVMIGVGVEREYERDSVKTKM 163
Query: 118 LHIDLQDSR 126
I+L +
Sbjct: 164 NVIELDSNE 172
>Medtr0042s0170.1 | replication factor-A carboxy-terminal domain
protein | LC | scaffold0042:77181-79334 | 20130731
Length = 400
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 59 TSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKML 118
T V S +IP+ G + D+ HL++ +GV++ E+ +I+D +L+ L
Sbjct: 3 TKVQASESTQIPQYGLCVCKIGEVCGHTVDYDHLVEIIGVMTGIYAEREYIRDGKLSPGL 62
Query: 119 HID--LQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVK------SFKGTPV 170
I + S GK+ C L GS V+++ + + PV+ QFVKVK S +
Sbjct: 63 VICYVIVLSGGKVECALFGSNVDLLLKIMGKSANGMPVVVLQFVKVKIFRDKVSLQNVLN 122
Query: 171 SSKVHFNPNIHDAIELTKS 189
++++ NP+I +A++ +
Sbjct: 123 ATRIIINPDIDEAVKFKEG 141
>Medtr6g069230.1 | animal RPA1 domain protein | LC |
chr6:24915605-24909459 | 20130731
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDGIRLTPHD-FRLIFHT 57
+IL+DR G KIQASV + +E R Y S F VV N +T H+ RLIFH+
Sbjct: 140 LILLDREGNKIQASVPLQCIEVFNHILEENRGYVFSDFHVVSNIADMMTTHNSHRLIFHS 199
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V + I + G S + ++ I V +++L+D +G ++ E + +L+ +
Sbjct: 200 NTEVIFTDIPAIDKFGLSIHGSEAISKHVFGYSYLVDVIGFLTDVHPEYVDDPFGRLSTV 259
Query: 118 LHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPVS------ 171
L +L + R +C L G +V PV+ Q ++ G+ +
Sbjct: 260 LRFELTNLR--FQCALYGKVVRSFQLMFDKVSEGLPVVVLQLARIVRDGGSIIVQSVKNI 317
Query: 172 SKVHFNPNIHDA 183
++V NP+ +A
Sbjct: 318 TRVFVNPDFEEA 329
>Medtr3g037500.1 | transmembrane protein, putative | LC |
chr3:13783344-13781841 | 20130731
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 7 RGTKIQA---SVCRRHPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVA 62
+G KIQA ++C + R + VY + +F +V N G R+T H +++ T+V
Sbjct: 2 QGNKIQAYLPTLCM-ECLGRVVHENCVYVVPNFCLVPNVGSTRVTSHRYKIKILITTTVV 60
Query: 63 ESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDL 122
I R G S ++ I R HLID +G++++ + + L ++ ++L
Sbjct: 61 PCDIYTIQRYGVSLMSSAEINERRHGCAHLIDVMGLLTSLHYDYVVDVAESLATVVRLEL 120
Query: 123 QDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKV 162
D RGK C L G V + D L+ + P Q+VK+
Sbjct: 121 TDERGKFECALYGPYVGVFKDLLSGVGSVLPFAVLQYVKI 160
>Medtr1g072220.1 | DUF223 domain protein | LC |
chr1:32050688-32051353 | 20130731
Length = 131
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLN-DGIRLTPHDFRLIFHT 57
++LMDR+G +I S+ R + ++ G V+ IS V N D R + ++++L F
Sbjct: 3 LVLMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSDLYRPSRNEYKLNFTI 62
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF I N D +L+D +GV+ G E+ + +D TKM
Sbjct: 63 NTKVKLSKTVLVPTNVYSFTPAPDIFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 122
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 123 NVIEL-DSNG 131
>Medtr5g055160.1 | animal RPA1 domain protein | LC |
chr5:22720640-22718177 | 20130731
Length = 270
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LM+R+G +I AS+ R + ++ G V+ IS F V N+G R + ++++L F
Sbjct: 44 LVLMNRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQ 113
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D +
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPHVFNESYDNNYLVDVIGVMIGVGVEREYERDGK 159
>Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944777
| 20130731
Length = 163
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 6 RRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVA 62
++G +I AS+ R + ++ G V+ IS F V N G R + ++++L F T V
Sbjct: 40 KQGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK 99
Query: 63 ESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDL 122
S V +P N +SF + N D +L+D +GV+ G EK + +D TKM I+L
Sbjct: 100 LSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 159
Query: 123 QDSRG 127
DS G
Sbjct: 160 -DSNG 163
>Medtr4g071730.1 | hypothetical protein | LC |
chr4:27152365-27153311 | 20130731
Length = 154
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 74 WSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQDSRGKIRCLL 133
+SF + N D +L+D +GV+ G E+ + +D + +C L
Sbjct: 2 YSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGTY-------------RFKCTL 48
Query: 134 IGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGTPV------SSKVHFNPNIHDAIELT 187
G V + +L+S ++ V+A KVK F+G P S+++ FNP I + EL
Sbjct: 49 FGEYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSSTRITFNPEIGETKELR 108
Query: 188 KSL 190
KS
Sbjct: 109 KSF 111
>Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517059
| 20130731
Length = 206
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 8 GTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAES 64
G +I AS R + ++ G V+ IS F V N G R + ++++L F T V S
Sbjct: 11 GDRIGASTRRTLIYKSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLS 70
Query: 65 FDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQD 124
V +P N +SF + N D L+D +GV++ G E+ + D TKM I+L D
Sbjct: 71 KTVLVPTNVYSFTPASDVFNESYDNNFLVDVIGVMTGVGVEREYESDGVKTKMNVIEL-D 129
Query: 125 SRG 127
S G
Sbjct: 130 SNG 132
>Medtr1g052715.1 | DUF223 domain protein | LC |
chr1:21677037-21675057 | 20130731
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 1 MILMDRRGTKIQASVCRRHPITR---PIEVGRVYNISHFKVVLND-GIRLTPHDFRLIFH 56
MIL+D +G I ASV R+H + + E G +Y I V ND + TPH ++L
Sbjct: 3 MILLDNQGVTIHASV-RKHLLPQFKDQFEKGSIYVIEKLMVAQNDPTFKTTPHKYKLNLM 61
Query: 57 TCTSVAESFDV-RIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLT 115
T++ + D IP+ + F I N + LID +G + + K+ K+ +
Sbjct: 62 GGTTIFKLKDSNEIPKRHFQFMTFVDIMNCHKE-DRLIDVIGHVVEKDELKVTEKNGKTN 120
Query: 116 KMLHIDLQDSRG-KIRCLLIGSLVNIVADYLASNWTKRP-VIAFQFVKVKSFKG 167
K++ L+D G +I C L + +L S+ P VI Q K+K + G
Sbjct: 121 KVMDATLEDLDGNRIHCTLWDDYAEQLKRFLESHDPNLPAVILIQMCKLKKYFG 174
>Medtr2g099880.1 | DUF223 domain protein | LC |
chr2:42842228-42841554 | 20130731
Length = 137
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDGI-RLTPHDFRLIFHT 57
+++MDR+G +I AS+ R + ++ G V+ IS VV N G R + ++++L F
Sbjct: 9 LVIMDRKGDRIVASIRRTLVYKFKEQLQEGMVFTISSSNVVSNSGSYRPSHNEYKLNFTI 68
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQLTKM 117
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D TKM
Sbjct: 69 NTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKM 128
Query: 118 LHIDLQDSRG 127
I+L DS G
Sbjct: 129 NVIEL-DSNG 137
>Medtr8g078450.1 | DUF223 domain protein | LC |
chr8:33442410-33443580 | 20130731
Length = 157
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 30 VYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSD 88
V+ IS F V N+G R + ++++L F T V S V +P N +SF + N D
Sbjct: 2 VFTISSFDVASNNGSYRPSHNEYKLNFTINTKVKLSKIVLVPTNVYSFTPAPDVFNESYD 61
Query: 89 FTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQDSRG 127
+L+D +GV++ G E+ + +D TKM I+L DS G
Sbjct: 62 NNYLVDVIGVMTGVGVEREYERDGVKTKMNVIEL-DSNG 99
>Medtr5g007120.1 | transmembrane protein, putative | HC |
chr5:1213024-1210695 | 20130731
Length = 227
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 1 MILMDR--RGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLN-DGIRLTPHDFRLIF 55
M + DR RG +I AS+ R + ++ G V+ IS F V N D R + +++L F
Sbjct: 11 MKIRDRSVRGGQIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNF 70
Query: 56 HTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQ 113
T V S V +P N +SF + N D +L+D +GV+ G E+ + +D +
Sbjct: 71 TINTKVKLSITVLVPTNVYSFTPAPDVFNEFYDNNYLVDVIGVMIGVGVEREYERDGK 128
>Medtr2g032570.1 | animal RPA1 domain protein | LC |
chr2:12255994-12255202 | 20130731
Length = 174
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
++LM+R+G +I AS+ R + ++ G V+ IS F V N G R + ++++L F
Sbjct: 44 LVLMNRKGDRIGASIRRTLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTI 103
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLID--CLGVISAAGQEKLFIKDSQLT 115
T V S V +P N +SF + N D +L+D + + G E+ + +D T
Sbjct: 104 NTKVKLSKTVLVPTNVYSFTPAPHVFNESYDNNYLVDVIGVMIGVGVGVEREYERDGVKT 163
Query: 116 KMLHIDLQDSRG 127
KM I+L DS G
Sbjct: 164 KMNVIEL-DSNG 174
>Medtr1g050500.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:19683996-19681538 | 20130731
Length = 543
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 19/159 (11%)
Query: 39 VLNDGIRLTP--HDFRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCL 96
VL D RL +D R++ H T V +++D + NG + ++ I+ HLID +
Sbjct: 7 VLCDTARLKAAYNDHRMVIHPQTVVRKTYDFLVHGNGLTPLSSHILARPSLGVGHLIDVI 66
Query: 97 GVISAAGQEKLFIKDSQLTKMLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIA 156
G+++A + + + I ++ RG+ C+L G+ V + + + ++ PV+
Sbjct: 67 GLLTAISYHNV-----EDVVRVEICVKICRGRFDCVLYGAYVGLFQEMVNNSSPGLPVVV 121
Query: 157 FQFVKV---------KSFKGTPVSSKVHFNPNIHDAIEL 186
QF K+ +SFK +++ NP+I +A++
Sbjct: 122 LQFAKINRETGAFYLESFKDV---TRLLLNPHIGEALQF 157
>Medtr6g051880.1 | hypothetical protein | LC |
chr6:18064569-18062408 | 20130731
Length = 412
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 30 VYNISHFKVVLNDGIRLTP--HDFRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVS 87
VY + F V L D R+ +D R++ H T V +++D + NG S + I+
Sbjct: 7 VYLFAFFHV-LRDTARMKAAYNDHRMVIHPQTLVTKTYDFMVNGNGLSLLPSHILARPSL 65
Query: 88 DFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQDSRGKIRCLLIGSLVNIVADYLAS 147
+LID +G+++A +T +L +L D C+L G+ V + + +
Sbjct: 66 GVGYLIDVIGLLTAISYHSPEDSTGTMTTVLKFELTDF--IFGCVLYGAYVGLFQEMFNN 123
Query: 148 NWTKRPVIAFQFVKVKSFKGTPVSSKVHFNPNIHDAIELTKSLRTKAFLKGSIMRTL 204
+ P++AF V+SFK +++ NP I +A++ F G ++R+L
Sbjct: 124 SPPGLPIVAF---FVESFKDV---TRLLLNPRIGEALQ---------FRNGKVIRSL 165
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 38 VVLNDGIRLTPH-DFRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCL 96
V N G T H ++L F T + + + F I D +L+D +
Sbjct: 3 VAANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVI 62
Query: 97 GVISAAGQEKLFIKDSQLTKMLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIA 156
G+++ G E+ + ++ TK+ I ++ K++C L G+ V+ + +LA+ T V++
Sbjct: 63 GMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVS 122
Query: 157 FQFVKVKSFK 166
Q KVK F+
Sbjct: 123 IQLAKVKVFQ 132
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 1 MILMDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHT 57
M+L+D +G KI +V ++ + + G+VY I++F V + G R T H +++F
Sbjct: 48 MVLIDDKGGKIHVTVRKQLLYLFQHLLVKGKVYKIAYFSVAPSVGSYRSTLHPHKIVFQM 107
Query: 58 CTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFI 109
T V E + I G +F N I + ++ +L D +GV++ E++F+
Sbjct: 108 NTKVLECENSLISPCGLTFSNISKICSHTDEYDYLFDVMGVMTDISVERIFV 159
>Medtr7g104000.1 | animal RPA1 domain protein | HC |
chr7:42047405-42048721 | 20130731
Length = 242
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 8 GTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDGI-RLTPHDFRLIFHTCTSVAES 64
G +I AS+ R + ++ G V+ IS F V N+ + R + +++L F T V S
Sbjct: 45 GDQIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNNDLYRPSRKEYKLNFTINTKVKLS 104
Query: 65 FDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQ 113
V +P N +SF + N D +L+D +GV+ G E+ + +D +
Sbjct: 105 ITVLVPTNVYSFTPALDVFNEFYDNNYLVDVIGVMIGVGVEREYERDGE 153
>Medtr7g032985.1 | hypothetical protein | HC |
chr7:11639908-11639480 | 20130731
Length = 73
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 54 IFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQ 113
+F T V IP +G+SF I + D+ L+D +GV+S E+ +++D +
Sbjct: 1 MFQVKTKVQAHASSLIPVHGFSFTKISEITSSTKDYNFLVDVIGVLSGMSTEREYVRDGK 60
Query: 114 LTKMLHIDLQDSR 126
+T+M+ I+L D R
Sbjct: 61 VTRMIVIELTDHR 73
>Medtr5g056060.1 | transmembrane protein, putative | HC |
chr5:23106867-23105553 | 20130731
Length = 251
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 8 GTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLN-DGIRLTPHDFRLIFHTCTSVAES 64
G +I AS+ R + ++ G V+ IS F V N D R + +++L F T V S
Sbjct: 45 GDQIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLS 104
Query: 65 FDVRIPRNGWSFYNTQIIRNRVSDFTHLIDCLGVISAAGQEKLFIKDSQ 113
+ +P N +SF + N D +L+D +GV+ G E+ + +D +
Sbjct: 105 ITILVPTNVYSFTPAPDVFNEFYDNNYLVDVIGVMIGVGVEREYERDGK 153
>Medtr3g067530.1 | DUF223 domain protein | LC |
chr3:30107700-30116637 | 20130731
Length = 127
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 30 VYNISHFKVVLNDGI-RLTPHDFRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRVSD 88
V+ IS F V N G+ R + ++++L F T V +S V +P N +SF + N +
Sbjct: 2 VFTISSFDVASNSGLPRPSRNEYKLNFTINTKVKQSKIVLVPTNVYSFTPAPDVFNESYN 61
Query: 89 FTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQDSRGKIRCLLIGSLVNIVADYL--A 146
+L+D +GV++ G E +D TKM I+L DS G + + +N A L
Sbjct: 62 NNYLVDVIGVMTGVGVE----RDGVKTKMNVIEL-DSNG-----FLSANINSPASGLIQL 111
Query: 147 SNWTKRPVIAFQF 159
N ++ PV+ QF
Sbjct: 112 PNSSRIPVVIPQF 124
>Medtr8g461360.1 | DUF223 domain protein | LC |
chr8:21582245-21584205 | 20130731
Length = 222
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 28 GRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNRV 86
G+VY++S+F V +N G R T H+++L F T V +P + + N + N
Sbjct: 16 GKVYSMSNFGVAVNLGSYRTTKHEYKLNFQFNTKVKLCDKNGVPSDIYLIANLIDVFNSE 75
Query: 87 SDFTHLIDCLGVISAAGQEKLFIKDSQLTKMLHIDLQDSRGKIRCLLIGSLVNIVADYLA 146
D +L++ + +++ G ++ + ++ TKM+ ++L K + L G + ++A
Sbjct: 76 YDTDYLVNVMSMLTGVGMQREYERNGAKTKMVAMELDYDGFKFKVTLFGQYTEELDVFVA 135
Query: 147 S 147
+
Sbjct: 136 A 136