Miyakogusa Predicted Gene

Lj0g3v0327029.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327029.1 Non Characterized Hit- tr|A3BER1|A3BER1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,43.75,0.0000000001,ADP-ribosylation,NULL; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; ZINC_FINGER_C2H2_1,CUFF.22245.1
         (426 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g081420.1 | C2H2-like zinc finger protein | HC | chr4:3157...   610   e-175
Medtr2g010860.1 | C2H2-like zinc finger protein | HC | chr2:2551...   233   2e-61
Medtr2g010870.1 | C2H2-like zinc finger protein | HC | chr2:2562...   228   1e-59
Medtr1g024980.1 | C2H2-like zinc finger protein | HC | chr1:7957...   202   5e-52
Medtr3g072920.1 | nucleic acid-binding protein | HC | chr3:32823...   191   8e-49
Medtr3g463270.1 | C2H2-like zinc finger protein | HC | chr3:2532...   152   5e-37
Medtr5g012220.1 | zinc finger (C2H2 type) family protein, putati...   110   2e-24
Medtr4g101450.1 | zinc finger (C2H2 type) family protein, putati...   101   1e-21
Medtr5g094440.1 | nucleic acid-binding protein | HC | chr5:41275...    93   4e-19

>Medtr4g081420.1 | C2H2-like zinc finger protein | HC |
           chr4:31572240-31574750 | 20130731
          Length = 437

 Score =  610 bits (1573), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 326/433 (75%), Positives = 343/433 (79%), Gaps = 15/433 (3%)

Query: 1   MPTVWFNLKRSLHCKSEPSEVHDPKSRKQLSTILTKKPGRSGCSRS--IANLKDVIHGSK 58
           MPTVWF+LK+SLHCKSEPS+VHDPK+RK LSTILTKK G      S  IANLKDVIHGSK
Sbjct: 11  MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIANLKDVIHGSK 70

Query: 59  RHLEDKPPTCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEXXXXXXXXXXXXX 118
           RH+E KPP+CSPRSIGSSEFLNPITHEVILSNSRCELKITG   FQE             
Sbjct: 71  RHIE-KPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITG---FQEGINGGGNNASGGS 126

Query: 119 XXXXS-TFVGTLRXXXXXXXXXXXMHYFNPSFRTSSTPPRKSPFSSSDKEGSG-----LH 172
               S T+VGTLR           MHYFNPSFRTSSTPPRKSPF  S+          +H
Sbjct: 127 SSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSNGFHGGGGVH 186

Query: 173 SSNRFHPETTTDSNGSSSVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEII 232
           SSNR   ET  DSNGSS+VTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEII
Sbjct: 187 SSNRMSLET--DSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEII 244

Query: 233 CRTSWLKSENNCGRIERVLKVHNMQRTLARFEEYREMVKTKASKLQKKHPRCLADGNELL 292
           CRTSWLKSEN+CGRIERVLKVHNMQ+TLARFEEYREMVK KASKLQKKHPRCLADGNELL
Sbjct: 245 CRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELL 304

Query: 293 RFYGTTLAXXXXXXXXXXXXXXDKCCVCRIIRNGFSAKKELKXXXXXXXXXXXXRAFETI 352
           RFYGTT+A              +KCCVCRIIR+GFSAKKELK            RAFE+I
Sbjct: 305 RFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKKELKGGIGVFTTSTSGRAFESI 364

Query: 353 ESFGNEPPSLRKALIVCRVIAGRVHRPLENIQEIASQTGFDSLAGKVGLYSNIEELYLLN 412
           E F NE PSLRKALIVCRVIAGRVHRPLENIQE+ASQTGFDSLAGKVGLYSNIEELYLLN
Sbjct: 365 EIFDNE-PSLRKALIVCRVIAGRVHRPLENIQEMASQTGFDSLAGKVGLYSNIEELYLLN 423

Query: 413 PRALLPCFVVICK 425
           PRALLPCFVVICK
Sbjct: 424 PRALLPCFVVICK 436


>Medtr2g010860.1 | C2H2-like zinc finger protein | HC |
           chr2:2551625-2553304 | 20130731
          Length = 378

 Score =  233 bits (595), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/430 (37%), Positives = 217/430 (50%), Gaps = 59/430 (13%)

Query: 1   MPTVWFNLKRSLHCKSEPSEVHDPKSRKQLSTILTKKPGRSGCSRSIANLKDVIHGSKRH 60
           M     +LK  L CK     V+DPK+ K       K          + +  ++I GSKR 
Sbjct: 1   MLEFCVSLKNKLQCKPNKKHVYDPKTIKH-----QKGKNNQRTKSGLLDHSNIIQGSKRF 55

Query: 61  LEDKPPTCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEXXXXXXXXXXXXXXX 120
           L +   +    S GS E  +PI HE++  +S  ++  +G   F+                
Sbjct: 56  LTN-SSSLYQESEGSIEISDPIIHEILHDSSIGQICSSGRKDFE---------------- 98

Query: 121 XXSTFVGTLRXXXXXXXXXXXMHYFNPSFRTSSTPPRKSPFSS-SDKEGSGLHSSNRFHP 179
                                      SFRT+ +    S  ++  D     + S  R   
Sbjct: 99  --------------------------GSFRTTRSASTSSWLTNPVDYNEENVSSRTRLLV 132

Query: 180 ETTTDSNGSSSVTCHKCGEQFNKWEAAEAHHLSKH-AVTELVEGDSSRKIVEIICR--TS 236
           +  +D +G S + CHKCGE+       E HH+++H +VTEL E  SSRKIVE IC   TS
Sbjct: 133 QMDSD-DGPSILICHKCGEKLKNLNDVETHHITEHYSVTEL-EETSSRKIVETICESGTS 190

Query: 237 WLKSENNCGRIERVLKVHNMQRTLARFEEYREMVKTKASKLQ-KKHPRCLADGNELLRFY 295
           ++ SE    +I+ +LKVHNM +T   FEEYREMVK  A+KLQ K H RCL DGNELL F+
Sbjct: 191 FISSE--LWQIDCILKVHNMPKTFQCFEEYREMVKINANKLQIKNHARCLVDGNELLMFH 248

Query: 296 GTTLAXXXXXXXXXXXXXXDKCCVCRIIRNGFSAKKELKXXXXXXXXXXXXRAFETIESF 355
           GT +A              D C VC+I+R+GFS  KE +            +AF++I   
Sbjct: 249 GTNIACSLGINGSYSLCTLDYCGVCQILRHGFSTNKEFQGALGVYTSSTSGKAFDSI-ML 307

Query: 356 GNEPPSLRKALIVCRVIAGRVHRPLENIQEIASQTGFDSLAGKVGLYSNIEELYLLNPRA 415
            +E    RKA+I+CRVIAGRVH P E IQE    +GFDS A K+  +SNIEEL LLNP+A
Sbjct: 308 SDERAFTRKAVIMCRVIAGRVHCPFEEIQE-KIDSGFDSFAEKISDHSNIEELCLLNPKA 366

Query: 416 LLPCFVVICK 425
           LLPCFVVI K
Sbjct: 367 LLPCFVVIYK 376


>Medtr2g010870.1 | C2H2-like zinc finger protein | HC |
           chr2:2562022-2566589 | 20130731
          Length = 368

 Score =  228 bits (580), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/271 (46%), Positives = 164/271 (60%), Gaps = 11/271 (4%)

Query: 164 SDKEGSGLHSSNRFHPETTTDSNGSSSVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGD 223
            D +   + S  R   E  ++    S + C+KCGE+     A EAHH+++H+VTEL E D
Sbjct: 87  DDYDEENVSSRTRLLVEMDSEDCCPSILICYKCGEKLKNLTAVEAHHITEHSVTEL-EED 145

Query: 224 SSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQRTLARFEEYREMVKTKASKLQKKHPR 283
           SSR+IV IIC        +   +I+ +LKVHNM +TLA FEEYRE+VK  A+KL   HPR
Sbjct: 146 SSRQIVGIICGNGTNLVSSELRQIDCILKVHNMPKTLACFEEYREIVKINANKLHVNHPR 205

Query: 284 CLADGNELLRFYGTTLAXXXXXXXXXXXXXXDKCCVCRIIRNGFSAKKELKXXX------ 337
           CLADGNELL F+GT +A              D C VC+I+R+GFS   E +         
Sbjct: 206 CLADGNELLMFHGTNIACSLGINNSFSLCDLDYCGVCQILRHGFSTNMEFQGAQGRNGPE 265

Query: 338 ---XXXXXXXXXRAFETIESFGNEPPSLRKALIVCRVIAGRVHRPLENIQEIASQTGFDS 394
                       +AFE+I    ++    RK++IVCRVIAGRV  PLE IQE    +GFDS
Sbjct: 266 GALGVYTTSISGKAFESIIRLCDDEAFTRKSVIVCRVIAGRVLCPLEEIQE-NVDSGFDS 324

Query: 395 LAGKVGLYSNIEELYLLNPRALLPCFVVICK 425
           LAG++ +YS+IEELYLLNP+ALLPCFVVI K
Sbjct: 325 LAGRISVYSDIEELYLLNPKALLPCFVVIYK 355


>Medtr1g024980.1 | C2H2-like zinc finger protein | HC |
           chr1:7957883-7961646 | 20130731
          Length = 403

 Score =  202 bits (514), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/234 (47%), Positives = 142/234 (60%), Gaps = 14/234 (5%)

Query: 193 CHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLK 252
           C +CGE F K E+ E H   +HAV+EL   DS R IVEII ++SWLK E    +IER+LK
Sbjct: 176 CDQCGEVFPKIESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRETPMCKIERILK 235

Query: 253 VHNMQRTLARFEEYREMVKTKASKLQKKHPRCLADGNELLRFYGTTLAXXXXXXXXXXXX 312
           VHN QRT+ RFEE R+ VK++AS   KK+PRC ADGNELLRF+ T+L+            
Sbjct: 236 VHNTQRTIQRFEECRDAVKSRASNTTKKNPRCAADGNELLRFHSTSLSCALGASGSSTLC 295

Query: 313 XXDKCCVCRIIRNGFSAKKELKXXXXXXXXXXXXRAFETIESFGNEPPSLRKALIVCRVI 372
               C VC IIR+GF  K  +K            RA +   S G +    R+A++VCRVI
Sbjct: 296 AVPGCGVCNIIRHGFQKKGGVK------TNASSGRAHDN--SVGEDS---RRAMLVCRVI 344

Query: 373 AGRVHRPLENIQEIASQ---TGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVI 423
           AG+V R  E    + S+     FDS AG  G YSN+E+L + NPRA+LPCFVVI
Sbjct: 345 AGKVKRVAEEGARVVSEEEMVCFDSTAGNAGSYSNLEDLTVFNPRAILPCFVVI 398


>Medtr3g072920.1 | nucleic acid-binding protein | HC |
           chr3:32823995-32821730 | 20130731
          Length = 452

 Score =  191 bits (486), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 149/245 (60%), Gaps = 6/245 (2%)

Query: 182 TTDSNGSSSV-TCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKS 240
           T DS+  SS+ +C  CGE   K E+ E H   KHAV+EL   D+S+ IVEII  +SWLK 
Sbjct: 207 TRDSSLRSSICSCPDCGE-IMKTESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKK 265

Query: 241 ENNCGRIERVLKVHNMQRTLARFEEYREMVKTKASKLQKKHPRCLADGNELLRFYGTT-L 299
           ++   +I+R+LKV N Q+T+ +FEEYR+ +K KA+ L KKHPRC+ADGNELLRF+ TT +
Sbjct: 266 QSPVCKIDRILKVQNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFV 325

Query: 300 AXXXXXXXXXXXXXXDKCCVCRIIRNGFSAKKELKXXXXXXXXXXXXRAFETIESFGNEP 359
                           +C VC II++GF                   +A   ++  G E 
Sbjct: 326 CSLGLNGSSNLCNSTSQCNVCGIIKHGFKLNGGDGILTTATSGKAHDKASSVLDVSGCES 385

Query: 360 PSLRKALIVCRVIAGRVHRPLENIQEIASQTGFDSL-AGKVGLYSNIEELYLLNPRALLP 418
              ++A++VCRVIAGRV + +E    +  +  +DS+ AG  G YSN++ELY+ NPRA+LP
Sbjct: 386 GDEKRAMLVCRVIAGRVKKNMEGGSNVMEE--YDSVSAGDAGAYSNLDELYVNNPRAILP 443

Query: 419 CFVVI 423
           CFVVI
Sbjct: 444 CFVVI 448


>Medtr3g463270.1 | C2H2-like zinc finger protein | HC |
           chr3:25329997-25332232 | 20130731
          Length = 389

 Score =  152 bits (385), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 37/291 (12%)

Query: 146 NPSFRTSSTPPRKSPFSSSDKEGSGLHSSNRFHPETTTDSNGSSSVTCHKCGEQFNKWEA 205
           +PSF+    PPRK   S SD       ++N F P        +    C  CGE F K   
Sbjct: 120 DPSFQD---PPRKKQ-SESDISAD---NNNLFFPLR------NDIFPCTACGEIFQKPNL 166

Query: 206 AEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQRTLARFEE 265
            E H  + HAV+EL+  D    IV+II ++ W ++ N    I R++K+HN Q+ L++FEE
Sbjct: 167 LENHQSANHAVSELIGSDPGHNIVQIIFKSGWPET-NTFPNIHRIMKIHNSQKILSKFEE 225

Query: 266 YREMVKTKASK--LQKKHPRCLADGNELLRFYGTTLAXXXXXXXXXXXXXXDKCCVCRII 323
           YRE VK KA++   +++  RC+ADGNEL+RF+ +T                  C +C II
Sbjct: 226 YRETVKIKAARGVTRRRDERCIADGNELMRFHCSTFLCELGHNGDSSICSQQFCNICGII 285

Query: 324 RNGFSAKKELKXXXXXXXXXXXXRAFETIES-------FGNEPPSLRKALIVCRVIAGRV 376
           ++GFS K +              RA  +I         F N    +++A++VCRVIAGRV
Sbjct: 286 KSGFSPKLD-----GISTLSTSWRAHVSIPDDIEREFKFMN----VKRAMLVCRVIAGRV 336

Query: 377 HRPLENIQEIASQTGFDSLA--GKVGLYSNI--EELYLLNPRALLPCFVVI 423
              L++ +   +  GFDS+   G+ G+Y+ +  EEL + NPRA+LPCFV++
Sbjct: 337 GSDLDD-EVDKTDGGFDSVMARGESGVYTRLDEEELVVFNPRAVLPCFVIV 386


>Medtr5g012220.1 | zinc finger (C2H2 type) family protein, putative
           | HC | chr5:3627133-3625775 | 20130731
          Length = 290

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 109/215 (50%), Gaps = 34/215 (15%)

Query: 215 AVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQRTLARFEEYREMVKTK- 273
           ++TEL EG  SR +VEII  TSW   +   GR+E + KVHN  RT+ RFEEYRE VKT+ 
Sbjct: 105 SLTELNEGHPSRNVVEIIFHTSW-GPKPFSGRVEMIFKVHNGSRTVTRFEEYRETVKTRP 163

Query: 274 ASKLQKKHPRCLADGNELLRFY--GTTLAXXXXXXXXXXXXXXDKCCVCRIIRNGFSAKK 331
            S+  +++ RC+ADGNE++RF+  G T                 K        +G     
Sbjct: 164 GSRNHEENARCVADGNEVMRFHCLGPTSGGGPYGGACVGSFPGGKGTAAICTFSGSGGAH 223

Query: 332 ELKXXXXXXXXXXXXRAFETIESFGNEPPSLRKALIVCRVIAGRVHRPLENIQE-IASQT 390
           E                     S G      R+A++VCRVIAGRV + +  +   +  + 
Sbjct: 224 E--------------------SSGGGRG---RRAMLVCRVIAGRVSKRVGFVDSLLDGRV 260

Query: 391 GFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICK 425
           GFDS++G  G      EL + + RA+LPCF++I +
Sbjct: 261 GFDSVSGDNG------ELLVFDSRAVLPCFLIIYR 289


>Medtr4g101450.1 | zinc finger (C2H2 type) family protein, putative
           | HC | chr4:41957218-41958219 | 20130731
          Length = 275

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 37/209 (17%)

Query: 218 ELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQRTLARFEEYREMVKTKASKL 277
           EL EG  SR +V+II  TSW  +E   GR+E + KV N  RT++RFEE+RE VKT+A+  
Sbjct: 98  ELPEGHPSRNVVDIIFHTSWGNNEFP-GRVEMIFKVQNGARTMSRFEEFREAVKTRAASS 156

Query: 278 ---QKKHPRCLADGNELLRFYGTTLAXXXXXXXXXXXXXXDKCCVCRIIRNGFSAKKELK 334
               +++ RC+ADGNE+++F+    A                  +C    +G + +    
Sbjct: 157 VSDSEENARCVADGNEVMQFHCLGPAEDGGPHGSWSFPERKGAAICTFSGSGGAHEN--- 213

Query: 335 XXXXXXXXXXXXRAFETIESFGNEPPSLRKALIVCRVIAGRVHRPLENIQEIASQTGFDS 394
                              S G +    R A++VCRV+AGRV + +  +     + GFDS
Sbjct: 214 -------------------SGGGKG---RMAMLVCRVVAGRVSKRVGYLD--YKRVGFDS 249

Query: 395 LAGKVGLYSNIEELYLLNPRALLPCFVVI 423
           ++G  G      EL + + RA+LPCF++I
Sbjct: 250 VSGDNG------ELLVFDSRAVLPCFLII 272


>Medtr5g094440.1 | nucleic acid-binding protein | HC |
           chr5:41275804-41277174 | 20130731
          Length = 270

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 15/214 (7%)

Query: 212 SKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQRTLARFEEYREMVK 271
           S+  + EL  GD SRKIVE+I + +W+ +     ++  VL+V   +  L RFE+YRE VK
Sbjct: 68  SQARLFELGIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVRYSEEVLERFEKYREKVK 127

Query: 272 TKASKLQKKHPRCLADGNELLRFYGTTLA--XXXXXXXXXXXXXXDKCCVCRIIRNGFSA 329
            +      +HPR   DGNELLRFY TT+                   C  C++I+  F A
Sbjct: 128 EQYP----RHPRSTVDGNELLRFYVTTMRCFQGKPMKKVHDLCKDPSCRFCQVIQFNFDA 183

Query: 330 KKELKXXXXXXXXXXXXRAFETIESFGNEPPSLRKALIVCRVIAGRVHRPLENIQEIASQ 389
           +                +     +S      ++++ LIVCR+IAG     ++   E  S+
Sbjct: 184 E------HAEILLNTCEKDLSNRKSVNARVKNVKRVLIVCRIIAGTAVNEVDGNYEECSE 237

Query: 390 TGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVI 423
                L     +  ++E   + NP ++LPCFV+I
Sbjct: 238 CDSTRLG---EMQFSLERFVVKNPSSILPCFVII 268