Miyakogusa Predicted Gene

Lj0g3v0326889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326889.1 tr|B9NKJ8|B9NKJ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591069 PE=4 SV=1,60.53,0.00006,
,CUFF.22237.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g092420.2 | transmembrane protein, putative | HC | chr1:41...   221   2e-58
Medtr1g092420.3 | transmembrane protein, putative | HC | chr1:41...   221   2e-58
Medtr1g092420.1 | transmembrane protein, putative | HC | chr1:41...   221   2e-58
Medtr0271s0070.2 | transmembrane protein, putative | HC | scaffo...   220   4e-58
Medtr0271s0070.1 | transmembrane protein, putative | HC | scaffo...   220   4e-58
Medtr2g013680.1 | transmembrane protein, putative | HC | chr2:37...   211   2e-55

>Medtr1g092420.2 | transmembrane protein, putative | HC |
           chr1:41412161-41413295 | 20130731
          Length = 145

 Score =  221 bits (563), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 104/144 (72%), Positives = 122/144 (84%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M SS F LIC LHS IAL+CG++M+FYS+E+ V G G +TA KLQGST HDQLLI+TSDS
Sbjct: 1   MGSSCFFLICVLHSTIALTCGSLMVFYSEEVHVLGHGTKTAIKLQGSTPHDQLLIQTSDS 60

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLF IG L+ MV+ VKD +FQSFFAKGCV LH+SMAVWRF+F  K+E+LA DWPRH
Sbjct: 61  FSGLLLFTIGFLVFMVACVKDMEFQSFFAKGCVFLHISMAVWRFYFVAKVEELACDWPRH 120

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
            VG++ALA+SWVFFLVF WREKYD
Sbjct: 121 VVGDLALAISWVFFLVFMWREKYD 144


>Medtr1g092420.3 | transmembrane protein, putative | HC |
           chr1:41412153-41413295 | 20130731
          Length = 145

 Score =  221 bits (563), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 104/144 (72%), Positives = 122/144 (84%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M SS F LIC LHS IAL+CG++M+FYS+E+ V G G +TA KLQGST HDQLLI+TSDS
Sbjct: 1   MGSSCFFLICVLHSTIALTCGSLMVFYSEEVHVLGHGTKTAIKLQGSTPHDQLLIQTSDS 60

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLF IG L+ MV+ VKD +FQSFFAKGCV LH+SMAVWRF+F  K+E+LA DWPRH
Sbjct: 61  FSGLLLFTIGFLVFMVACVKDMEFQSFFAKGCVFLHISMAVWRFYFVAKVEELACDWPRH 120

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
            VG++ALA+SWVFFLVF WREKYD
Sbjct: 121 VVGDLALAISWVFFLVFMWREKYD 144


>Medtr1g092420.1 | transmembrane protein, putative | HC |
           chr1:41412276-41413295 | 20130731
          Length = 145

 Score =  221 bits (563), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 104/144 (72%), Positives = 122/144 (84%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M SS F LIC LHS IAL+CG++M+FYS+E+ V G G +TA KLQGST HDQLLI+TSDS
Sbjct: 1   MGSSCFFLICVLHSTIALTCGSLMVFYSEEVHVLGHGTKTAIKLQGSTPHDQLLIQTSDS 60

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLF IG L+ MV+ VKD +FQSFFAKGCV LH+SMAVWRF+F  K+E+LA DWPRH
Sbjct: 61  FSGLLLFTIGFLVFMVACVKDMEFQSFFAKGCVFLHISMAVWRFYFVAKVEELACDWPRH 120

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
            VG++ALA+SWVFFLVF WREKYD
Sbjct: 121 VVGDLALAISWVFFLVFMWREKYD 144


>Medtr0271s0070.2 | transmembrane protein, putative | HC |
           scaffold0271:19195-18335 | 20130731
          Length = 144

 Score =  220 bits (560), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 103/144 (71%), Positives = 122/144 (84%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M SS F LIC LHS IAL+CG++M+FYS+E+ V G G +TA KLQGST HDQLLI+TSDS
Sbjct: 1   MGSSCFFLICVLHSTIALTCGSLMVFYSEEVHVLGHGTKTAIKLQGSTPHDQLLIQTSDS 60

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLF IG L+ MV+ VKD +FQSFFAKGCV LH+SMAVWRF+F  K+E+LA DWPRH
Sbjct: 61  FSGLLLFTIGFLVFMVACVKDMEFQSFFAKGCVFLHISMAVWRFYFVGKVEELACDWPRH 120

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
            VG++ALA+SWVFFLV+ WREKYD
Sbjct: 121 VVGDLALAISWVFFLVYMWREKYD 144


>Medtr0271s0070.1 | transmembrane protein, putative | HC |
           scaffold0271:19203-18288 | 20130731
          Length = 144

 Score =  220 bits (560), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 103/144 (71%), Positives = 122/144 (84%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M SS F LIC LHS IAL+CG++M+FYS+E+ V G G +TA KLQGST HDQLLI+TSDS
Sbjct: 1   MGSSCFFLICVLHSTIALTCGSLMVFYSEEVHVLGHGTKTAIKLQGSTPHDQLLIQTSDS 60

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLF IG L+ MV+ VKD +FQSFFAKGCV LH+SMAVWRF+F  K+E+LA DWPRH
Sbjct: 61  FSGLLLFTIGFLVFMVACVKDMEFQSFFAKGCVFLHISMAVWRFYFVGKVEELACDWPRH 120

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
            VG++ALA+SWVFFLV+ WREKYD
Sbjct: 121 VVGDLALAISWVFFLVYMWREKYD 144


>Medtr2g013680.1 | transmembrane protein, putative | HC |
           chr2:3723303-3720779 | 20130731
          Length = 145

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 102/142 (71%), Positives = 117/142 (82%)

Query: 3   SSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFS 62
           SS F +IC LHS IA++ GA+M+FY KE+  FG G +TA+KL GST HDQLLIKTSDSFS
Sbjct: 4   SSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSDSFS 63

Query: 63  GLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAV 122
           GLLL AIG LL MVS VKDRDFQ FFAKGC LLHV MA+WR +FERK+EDLA DW R  V
Sbjct: 64  GLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLRQTV 123

Query: 123 GNIALAVSWVFFLVFSWREKYD 144
           G++ LA+SWVFFLV+SWREKYD
Sbjct: 124 GDVLLALSWVFFLVYSWREKYD 145