Miyakogusa Predicted Gene
- Lj0g3v0326369.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0326369.1 Non Characterized Hit- tr|B9RZU0|B9RZU0_RICCO
Poly(A) polymerase, putative OS=Ricinus communis
GN=RC,62.09,0,seg,NULL; PAP/OAS1 substrate-binding domain,NULL;
PAP/Archaeal CCA-adding enzyme, C-terminal domain,,CUFF.22191.1
(336 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g106560.2 | poly(A) polymerase-like protein | HC | chr8:44... 150 2e-36
Medtr8g106560.1 | poly(A) polymerase-like protein | HC | chr8:44... 150 2e-36
Medtr8g106560.3 | poly(A) polymerase-like protein | HC | chr8:44... 150 2e-36
Medtr8g014560.5 | poly(A) polymerase | HC | chr8:4593559-4588712... 147 1e-35
Medtr8g014560.6 | poly(A) polymerase | HC | chr8:4593559-4588712... 147 1e-35
Medtr8g014560.3 | poly(A) polymerase | HC | chr8:4593559-4588008... 147 1e-35
Medtr8g014560.4 | poly(A) polymerase | HC | chr8:4593559-4588712... 147 1e-35
Medtr8g014560.1 | poly(A) polymerase | HC | chr8:4593559-4588712... 147 1e-35
Medtr8g014560.2 | poly(A) polymerase | HC | chr8:4593559-4588003... 147 1e-35
Medtr8g014560.7 | poly(A) polymerase | HC | chr8:4592600-4588712... 147 1e-35
Medtr6g082000.1 | poly(A) polymerase-like protein | HC | chr6:30... 147 2e-35
Medtr3g110375.9 | poly(A) polymerase-like protein | HC | chr3:51... 145 5e-35
Medtr3g110375.5 | poly(A) polymerase-like protein | HC | chr3:51... 145 5e-35
Medtr3g110375.6 | poly(A) polymerase-like protein | HC | chr3:51... 145 5e-35
Medtr3g110375.2 | poly(A) polymerase-like protein | HC | chr3:51... 145 5e-35
Medtr3g110375.8 | poly(A) polymerase-like protein | HC | chr3:51... 145 5e-35
Medtr3g110375.3 | poly(A) polymerase-like protein | HC | chr3:51... 145 6e-35
Medtr3g110375.4 | poly(A) polymerase-like protein | HC | chr3:51... 145 6e-35
Medtr3g110375.7 | poly(A) polymerase-like protein | HC | chr3:51... 145 6e-35
Medtr3g110375.1 | poly(A) polymerase-like protein | HC | chr3:51... 109 4e-24
Medtr0283s0030.1 | poly(A) polymerase | HC | scaffold0283:12811-... 104 9e-23
>Medtr8g106560.2 | poly(A) polymerase-like protein | HC |
chr8:44967321-44960896 | 20130731
Length = 754
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 20/274 (7%)
Query: 5 DDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAVLV 64
D+ + +SL+G R +IL LVPN++NF++ LRC+KLWAK R A+LV
Sbjct: 192 DEQTVRSLNGCRVTDQILHLVPNIQNFRTTLRCVKLWAKCRGVYSNVAGFLGGINWALLV 251
Query: 65 AYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIETRSFM 116
+CQ +P+A N L++ FFR + W WP PVML +EG L V + + M
Sbjct: 252 GRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLM 311
Query: 117 PILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRYTQ 176
PI+ P+ P N++ ST + EF RG I + WD +FE +P+ + Y
Sbjct: 312 PIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAMEANKADWDTLFEPYPFFESYKN 371
Query: 177 FVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEP-NV 232
+++I +S + L +W GWVKSR R L L I G C P+P ++ D K+ P +
Sbjct: 372 YLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFSD--KSRPLHC 429
Query: 233 VFYWGLQH------DKYNLVDIDLVEGEFMKIIN 260
++ GLQ ++ D+ L EF +N
Sbjct: 430 SYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVN 463
>Medtr8g106560.1 | poly(A) polymerase-like protein | HC |
chr8:44967313-44960863 | 20130731
Length = 754
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 20/274 (7%)
Query: 5 DDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAVLV 64
D+ + +SL+G R +IL LVPN++NF++ LRC+KLWAK R A+LV
Sbjct: 192 DEQTVRSLNGCRVTDQILHLVPNIQNFRTTLRCVKLWAKCRGVYSNVAGFLGGINWALLV 251
Query: 65 AYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIETRSFM 116
+CQ +P+A N L++ FFR + W WP PVML +EG L V + + M
Sbjct: 252 GRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLM 311
Query: 117 PILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRYTQ 176
PI+ P+ P N++ ST + EF RG I + WD +FE +P+ + Y
Sbjct: 312 PIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAMEANKADWDTLFEPYPFFESYKN 371
Query: 177 FVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEP-NV 232
+++I +S + L +W GWVKSR R L L I G C P+P ++ D K+ P +
Sbjct: 372 YLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFSD--KSRPLHC 429
Query: 233 VFYWGLQH------DKYNLVDIDLVEGEFMKIIN 260
++ GLQ ++ D+ L EF +N
Sbjct: 430 SYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVN 463
>Medtr8g106560.3 | poly(A) polymerase-like protein | HC |
chr8:44967321-44960896 | 20130731
Length = 754
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 20/274 (7%)
Query: 5 DDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAVLV 64
D+ + +SL+G R +IL LVPN++NF++ LRC+KLWAK R A+LV
Sbjct: 192 DEQTVRSLNGCRVTDQILHLVPNIQNFRTTLRCVKLWAKCRGVYSNVAGFLGGINWALLV 251
Query: 65 AYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIETRSFM 116
+CQ +P+A N L++ FFR + W WP PVML +EG L V + + M
Sbjct: 252 GRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLM 311
Query: 117 PILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRYTQ 176
PI+ P+ P N++ ST + EF RG I + WD +FE +P+ + Y
Sbjct: 312 PIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAMEANKADWDTLFEPYPFFESYKN 371
Query: 177 FVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEP-NV 232
+++I +S + L +W GWVKSR R L L I G C P+P ++ D K+ P +
Sbjct: 372 YLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFSD--KSRPLHC 429
Query: 233 VFYWGLQH------DKYNLVDIDLVEGEFMKIIN 260
++ GLQ ++ D+ L EF +N
Sbjct: 430 SYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVN 463
>Medtr8g014560.5 | poly(A) polymerase | HC | chr8:4593559-4588712 |
20130731
Length = 638
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr8g014560.6 | poly(A) polymerase | HC | chr8:4593559-4588712 |
20130731
Length = 638
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr8g014560.3 | poly(A) polymerase | HC | chr8:4593559-4588008 |
20130731
Length = 638
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr8g014560.4 | poly(A) polymerase | HC | chr8:4593559-4588712 |
20130731
Length = 625
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr8g014560.1 | poly(A) polymerase | HC | chr8:4593559-4588712 |
20130731
Length = 633
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr8g014560.2 | poly(A) polymerase | HC | chr8:4593559-4588003 |
20130731
Length = 633
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr8g014560.7 | poly(A) polymerase | HC | chr8:4592600-4588712 |
20130731
Length = 633
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
+ NID+ + +SL+G R +IL+LVPN+E F++ LRCLK WAKRR
Sbjct: 103 LHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNW 162
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LVA VCQ +P+A + L++ FFR + W WP PVML +E L V + +
Sbjct: 163 ALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDR 222
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N++ ST + +F G+ I D+ W +F + + +
Sbjct: 223 SHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFE 282
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGLLGILE-----GVQGFCDPNPTEYVDTNK 227
Y F++I + D L W GWV+SR R L ++E +Q C P P EY+D +
Sbjct: 283 GYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQ--CHPYPREYIDDTR 340
Query: 228 TEPNVVFYWGLQHDKYNLV 246
+ F+ GLQ + +V
Sbjct: 341 KCSHSAFFMGLQRKQGEVV 359
>Medtr6g082000.1 | poly(A) polymerase-like protein | HC |
chr6:30599628-30606293 | 20130731
Length = 752
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 16/269 (5%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
++N+D+ + SL+G R ++L+LVPN++NF++ LR ++ WAKRR
Sbjct: 187 LQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINL 246
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LV +CQ +P+A N L++ FFR + W WP PVML +EG L V + +
Sbjct: 247 ALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDR 306
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSK 172
MPI+ P+ P N+T ST + EF RG I + WD +FE +P+ +
Sbjct: 307 YHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFE 366
Query: 173 RYTQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTE 229
Y +++I ++ + L W GWV+SR R L L I + G C P P E+ D +++
Sbjct: 367 AYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSF 426
Query: 230 PNVVFYWGLQHDKYNLVDIDLVEGEFMKI 258
+ ++ GLQ + + + EGE I
Sbjct: 427 -HQCYFMGLQRKQ----GVPVSEGEQFDI 450
>Medtr3g110375.9 | poly(A) polymerase-like protein | HC |
chr3:51561676-51555466 | 20130731
Length = 671
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.5 | poly(A) polymerase-like protein | HC |
chr3:51561695-51555466 | 20130731
Length = 671
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.6 | poly(A) polymerase-like protein | HC |
chr3:51561695-51555466 | 20130731
Length = 671
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.2 | poly(A) polymerase-like protein | HC |
chr3:51561695-51555466 | 20130731
Length = 671
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.8 | poly(A) polymerase-like protein | HC |
chr3:51561676-51555466 | 20130731
Length = 671
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.3 | poly(A) polymerase-like protein | HC |
chr3:51561695-51555466 | 20130731
Length = 719
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.4 | poly(A) polymerase-like protein | HC |
chr3:51561695-51555466 | 20130731
Length = 719
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.7 | poly(A) polymerase-like protein | HC |
chr3:51561683-51555466 | 20130731
Length = 722
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE+F++ LRCLK WAKRR A+
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAI 256
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 257 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 316
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 317 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 376
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 377 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 436
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 437 SAFFMGLQ 444
>Medtr3g110375.1 | poly(A) polymerase-like protein | HC |
chr3:51561537-51555466 | 20130731
Length = 701
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 3 NIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXXAV 62
++D+ + +SL+G R +IL+LVPNVE L + WA +
Sbjct: 197 DVDEQTVRSLNGCRVADQILKLVPNVE-VTGFLGGVN-WA-------------------I 235
Query: 63 LVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML-----QEGMLPTVVDAIETRS--- 114
LVA VCQ +P+A + L++ FFR ++ W WP PVML E LP R
Sbjct: 236 LVARVCQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYH 295
Query: 115 FMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDLSKPDFIWDIVFELFPYSKRY 174
MPI+ P+ P N++ ST + +F G+ I ++ W +F+ + + + Y
Sbjct: 296 LMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAY 355
Query: 175 TQFVKIYLSTPDQRALGDWVGWVKSRFRGL-LGILEGVQGF--CDPNPTEYVDTNKTEPN 231
++++ + D L W GWV+SR R L L I G C P P EY DT+K +
Sbjct: 356 KNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAH 415
Query: 232 VVFYWGLQ 239
F+ GLQ
Sbjct: 416 SAFFMGLQ 423
>Medtr0283s0030.1 | poly(A) polymerase | HC |
scaffold0283:12811-10616 | 20130731
Length = 357
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 8/162 (4%)
Query: 1 MRNIDDTSWKSLSGVRANKRILQLVPNVENFQSVLRCLKLWAKRRXXXXXXXXXXXXXXX 60
++ D+ + +SL+G R +IL LVPN++NF++ LRC+KLWAK R
Sbjct: 188 LQYTDEQTVRSLNGCRVTDQILHLVPNIQNFRTTLRCVKLWAKCRGVYSNVAGFLGGINW 247
Query: 61 AVLVAYVCQRHPDATLNGLIANFFRTFAFWPWPTPVML---QEGMLPTVV-----DAIET 112
A+LV +CQ +P+A N L++ FFR + W WP PVML +EG L V + +
Sbjct: 248 ALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDK 307
Query: 113 RSFMPILLPSSPYEYCHSNITKSTFYRIRAEFLRGHNITRDL 154
MPI+ P+ P N++ ST + EF RG I L
Sbjct: 308 YHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEVL 349