Miyakogusa Predicted Gene

Lj0g3v0326269.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326269.3 Non Characterized Hit- tr|G1LG09|G1LG09_AILME
Uncharacterized protein OS=Ailuropoda melanoleuca
GN=N,26.92,0.00000000000003,Undecaprenyl diphosphate
synthase,Di-trans-poly-cis-decaprenylcistransferase-like; no
description,Di,CUFF.22187.3
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007260.2 | undecaprenyl pyrophosphate synthetase family p...   411   e-115
Medtr5g007260.1 | undecaprenyl pyrophosphate synthetase family p...   411   e-115
Medtr5g007330.1 | undecaprenyl pyrophosphate synthetase family p...   393   e-109

>Medtr5g007260.2 | undecaprenyl pyrophosphate synthetase family
           protein | HC | chr5:1263279-1268904 | 20130731
          Length = 253

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/255 (78%), Positives = 222/255 (87%), Gaps = 2/255 (0%)

Query: 2   VDFRDGAHKFSHCLVAIGNLGLRLIWYFLQVIVSTWYFVSAMVSLFESYFISYGVLKKYK 61
           +DFRD AH   H ++AI NLGL+L+WYFLQ+IVS WY++S + +LFESYFISYGV KKYK
Sbjct: 1   MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60

Query: 62  SVHIGKLGSLAIVIESEDAHQTSKVVKLLQWLDSIGVKYVCLYDMNGVLKKSKEAIFQKL 121
           S+ I KL  LAIVIESEDAHQTSKVV+LLQWLDS+G+K VCLYDMNGVLKKSKEAIF  +
Sbjct: 61  SLPIAKLRYLAIVIESEDAHQTSKVVQLLQWLDSLGIKNVCLYDMNGVLKKSKEAIFHTM 120

Query: 122 KNAKSIEGVNEAVTHHVPDHMTLEFISYVDGKEAVAKAANLTFEENLKRHNLGGELDGQI 181
           KNAKSIE VN+AVT HVPDHMTLEF+SYVDGKEAV KAANL F E+ KRHNL GELD Q 
Sbjct: 121 KNAKSIEEVNKAVTDHVPDHMTLEFVSYVDGKEAVTKAANLIFVESSKRHNLDGELDYQ- 179

Query: 182 LLEQQLNEALQIVGGKGPEPDLLLVYGPVRSHLGFPAWRIRYTEIVHMGSLNSMRYGSLI 241
            LE +LN+ALQIVG  GPEPDLLLVYGPVR HLGFPAWRIRYTEIVHMGSLN MRYGSLI
Sbjct: 180 -LEPRLNQALQIVGCIGPEPDLLLVYGPVRCHLGFPAWRIRYTEIVHMGSLNFMRYGSLI 238

Query: 242 KVIHNYTKVHQNYGT 256
           K I+N+TKVHQNYGT
Sbjct: 239 KAIYNFTKVHQNYGT 253


>Medtr5g007260.1 | undecaprenyl pyrophosphate synthetase family
           protein | HC | chr5:1263272-1268904 | 20130731
          Length = 253

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/255 (78%), Positives = 222/255 (87%), Gaps = 2/255 (0%)

Query: 2   VDFRDGAHKFSHCLVAIGNLGLRLIWYFLQVIVSTWYFVSAMVSLFESYFISYGVLKKYK 61
           +DFRD AH   H ++AI NLGL+L+WYFLQ+IVS WY++S + +LFESYFISYGV KKYK
Sbjct: 1   MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60

Query: 62  SVHIGKLGSLAIVIESEDAHQTSKVVKLLQWLDSIGVKYVCLYDMNGVLKKSKEAIFQKL 121
           S+ I KL  LAIVIESEDAHQTSKVV+LLQWLDS+G+K VCLYDMNGVLKKSKEAIF  +
Sbjct: 61  SLPIAKLRYLAIVIESEDAHQTSKVVQLLQWLDSLGIKNVCLYDMNGVLKKSKEAIFHTM 120

Query: 122 KNAKSIEGVNEAVTHHVPDHMTLEFISYVDGKEAVAKAANLTFEENLKRHNLGGELDGQI 181
           KNAKSIE VN+AVT HVPDHMTLEF+SYVDGKEAV KAANL F E+ KRHNL GELD Q 
Sbjct: 121 KNAKSIEEVNKAVTDHVPDHMTLEFVSYVDGKEAVTKAANLIFVESSKRHNLDGELDYQ- 179

Query: 182 LLEQQLNEALQIVGGKGPEPDLLLVYGPVRSHLGFPAWRIRYTEIVHMGSLNSMRYGSLI 241
            LE +LN+ALQIVG  GPEPDLLLVYGPVR HLGFPAWRIRYTEIVHMGSLN MRYGSLI
Sbjct: 180 -LEPRLNQALQIVGCIGPEPDLLLVYGPVRCHLGFPAWRIRYTEIVHMGSLNFMRYGSLI 238

Query: 242 KVIHNYTKVHQNYGT 256
           K I+N+TKVHQNYGT
Sbjct: 239 KAIYNFTKVHQNYGT 253


>Medtr5g007330.1 | undecaprenyl pyrophosphate synthetase family
           protein, putative | HC | chr5:1290910-1294961 | 20130731
          Length = 270

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/254 (77%), Positives = 215/254 (84%), Gaps = 12/254 (4%)

Query: 2   VDFRDGAHKFSHCLVAIGNLGLRLIWYFLQVIVSTWYFVSAMVSLFESYFISYGVLKKYK 61
           +DFRD AH F H ++AIGNL L+L+WYFLQ IVS +YF            ISY V K+YK
Sbjct: 1   MDFRDIAHNFYHFILAIGNLVLQLLWYFLQNIVSAYYF------------ISYRVFKQYK 48

Query: 62  SVHIGKLGSLAIVIESEDAHQTSKVVKLLQWLDSIGVKYVCLYDMNGVLKKSKEAIFQKL 121
           S+ I KL  LAIVIESEDAHQTSKVV+LLQWLDS+G+K VCLYDMNGVLKKSKEAIF K+
Sbjct: 49  SIPIAKLQYLAIVIESEDAHQTSKVVQLLQWLDSLGIKNVCLYDMNGVLKKSKEAIFHKM 108

Query: 122 KNAKSIEGVNEAVTHHVPDHMTLEFISYVDGKEAVAKAANLTFEENLKRHNLGGELDGQI 181
           KNAKSIE VNEAVT HVP HMTLEF+SYVDGKEAVAKAANL F ENLKRHNLGGELD Q 
Sbjct: 109 KNAKSIEEVNEAVTDHVPYHMTLEFVSYVDGKEAVAKAANLIFVENLKRHNLGGELDYQA 168

Query: 182 LLEQQLNEALQIVGGKGPEPDLLLVYGPVRSHLGFPAWRIRYTEIVHMGSLNSMRYGSLI 241
           LLE  LN+ALQIVG KGPEPDLLLVYGPVRSHLGFPAWRI+YTEIVHMGSLN MR+GSLI
Sbjct: 169 LLEPHLNQALQIVGCKGPEPDLLLVYGPVRSHLGFPAWRIQYTEIVHMGSLNFMRHGSLI 228

Query: 242 KVIHNYTKVHQNYG 255
           K I+N+TKVHQNYG
Sbjct: 229 KAIYNFTKVHQNYG 242