Miyakogusa Predicted Gene

Lj0g3v0326149.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326149.2 tr|I3TAG7|I3TAG7_LOTJA Uroporphyrinogen
decarboxylase OS=Lotus japonicus PE=2 SV=1,100,0,UROPORPHYRINOGEN
DECARBOXYLASE,Uroporphyrinogen decarboxylase HemE;
METHYLTETRAHYDROFOLATE:HOMOCYSTE,CUFF.22185.2
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072330.1 | uroporphyrinogen decarboxylase | HC | chr3:324...   315   8e-87
Medtr2g076340.1 | uroporphyrinogen decarboxylase | HC | chr2:319...   196   1e-50

>Medtr3g072330.1 | uroporphyrinogen decarboxylase | HC |
           chr3:32489055-32484665 | 20130731
          Length = 389

 Score =  315 bits (808), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 149/157 (94%), Positives = 155/157 (98%)

Query: 1   MARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYAS 60
           MARYIQYQADNGAQAVQIFDSWATELSPVDFE FSLPYLKQI+DTVKK+HPELPLILYAS
Sbjct: 231 MARYIQYQADNGAQAVQIFDSWATELSPVDFERFSLPYLKQIIDTVKKSHPELPLILYAS 290

Query: 61  GSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHD 120
           GSGGLLER+ALTGVDVVSLDWTVDMADGRRRLGPN+ +QGNVDPGVLFGSKE+ITDRIHD
Sbjct: 291 GSGGLLERIALTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKELITDRIHD 350

Query: 121 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 157
           TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI
Sbjct: 351 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 387


>Medtr2g076340.1 | uroporphyrinogen decarboxylase | HC |
           chr2:31981646-31987745 | 20130731
          Length = 407

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/157 (59%), Positives = 118/157 (75%)

Query: 1   MARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYAS 60
           +A YI +Q ++GA  +QIFDSW  +L P  +E +S PY+K+IV+ VKK  P+ PL+LY +
Sbjct: 237 IADYIVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVNLVKKKCPDTPLVLYIN 296

Query: 61  GSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHD 120
           G+GGLLER+  TGVDV+ LDWTVDMADGRRRLG  I VQGNVDP  LF     +T+ I  
Sbjct: 297 GNGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLTSLTEEIQR 356

Query: 121 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 157
            VR AG  +HILNLGHG++VGTPEE VAHFF+VA+ +
Sbjct: 357 VVRSAGPRQHILNLGHGVLVGTPEEAVAHFFDVARSL 393