Miyakogusa Predicted Gene

Lj0g3v0326059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326059.1 Non Characterized Hit- tr|K3YYY6|K3YYY6_SETIT
Uncharacterized protein OS=Setaria italica GN=Si019492,50.62,5e-19,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A, ABCA,CUFF.22163.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108163.1 | ABC transporter A family protein | HC | chr4:4...   161   1e-40
Medtr4g108240.1 | ABC transporter A family protein | HC | chr4:4...   158   1e-39
Medtr4g108210.1 | ABC transporter A family protein | HC | chr4:4...   156   5e-39
Medtr4g108153.1 | ABC transporter A family protein | HC | chr4:4...   154   1e-38
Medtr4g108170.1 | ABC transporter A family protein | HC | chr4:4...   151   1e-37
Medtr3g437870.1 | ABC transporter A family protein | HC | chr3:1...   143   4e-35

>Medtr4g108163.1 | ABC transporter A family protein | HC |
           chr4:44844962-44852895 | 20130731
          Length = 922

 Score =  161 bits (408), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/87 (82%), Positives = 85/87 (97%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE++V +LTPNANKIYHLSGTQKFELPKEE+++A+VFRA+EAAK+NFTV 
Sbjct: 836 MTTSSDHEKDVENMVQRLTPNANKIYHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVF 895

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGL+DTTLEDVFIKVAREAQAFDTL+
Sbjct: 896 AWGLSDTTLEDVFIKVAREAQAFDTLT 922


>Medtr4g108240.1 | ABC transporter A family protein | HC |
           chr4:44893783-44902165 | 20130731
          Length = 934

 Score =  158 bits (399), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/87 (83%), Positives = 83/87 (95%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE++V +LTPNANKIYHLSGTQKFELPKE+V+IA+VF+AVE AK+NFTV 
Sbjct: 848 MTTSSDHEKDVENIVQQLTPNANKIYHLSGTQKFELPKEDVKIANVFQAVEVAKRNFTVF 907

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGLADTTLEDVFIKVAREA AFDTLS
Sbjct: 908 AWGLADTTLEDVFIKVAREAHAFDTLS 934


>Medtr4g108210.1 | ABC transporter A family protein | HC |
           chr4:44879386-44885074 | 20130731
          Length = 535

 Score =  156 bits (394), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 71/87 (81%), Positives = 84/87 (96%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE++V +LTPNANKIYHLSGTQKFELPKE+V+IA++F+AVE AK+NFTV 
Sbjct: 449 MTTSSDHEKDVENMVQRLTPNANKIYHLSGTQKFELPKEDVKIANIFQAVEVAKRNFTVF 508

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGL+DTTLEDVFIKVAREA+AFDTLS
Sbjct: 509 AWGLSDTTLEDVFIKVAREARAFDTLS 535


>Medtr4g108153.1 | ABC transporter A family protein | HC |
           chr4:44832885-44841828 | 20130731
          Length = 892

 Score =  154 bits (390), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/86 (82%), Positives = 82/86 (95%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE++V +LTPNANKIYHLSGT KFELPKE+V+IA+VF+AVE AK+NFTV 
Sbjct: 806 MTTSSDHEKDVENIVQRLTPNANKIYHLSGTLKFELPKEDVKIANVFQAVEVAKRNFTVI 865

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTL 86
           AWGL+DTTLEDVFIKVAREAQAFDTL
Sbjct: 866 AWGLSDTTLEDVFIKVAREAQAFDTL 891


>Medtr4g108170.1 | ABC transporter A family protein | HC |
           chr4:44858044-44867506 | 20130731
          Length = 919

 Score =  151 bits (382), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/87 (79%), Positives = 82/87 (94%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE+++ +LTPNAN+IY LSGTQKFELPK+EV+IA+VF+AVE AK+NFTV 
Sbjct: 833 MTTSSDHEKDVENMIRRLTPNANRIYRLSGTQKFELPKKEVKIANVFQAVEVAKRNFTVF 892

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGLADTTLEDVFIKVA EA+AFDTLS
Sbjct: 893 AWGLADTTLEDVFIKVAHEAEAFDTLS 919


>Medtr3g437870.1 | ABC transporter A family protein | HC |
           chr3:12930672-12922696 | 20130731
          Length = 939

 Score =  143 bits (360), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 67/87 (77%), Positives = 76/87 (87%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           M TS DHE  VE LV +L+PNA KIYH+SGTQKFELPK+EV+I++VF+AVE AK+NF VS
Sbjct: 853 MATSIDHESNVEKLVQQLSPNAKKIYHISGTQKFELPKDEVKISNVFQAVETAKRNFPVS 912

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGLADTTLEDVFIKVAREAQ F TLS
Sbjct: 913 AWGLADTTLEDVFIKVAREAQPFHTLS 939