Miyakogusa Predicted Gene

Lj0g3v0325979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325979.1 tr|A8HXX4|A8HXX4_CHLRE Serine/threonine protein
phosphatase OS=Chlamydomonas reinhardtii
GN=CHLREDRA,42.45,0.000000000000005,PP2C-like,Protein phosphatase
2C-like; SUBFAMILY NOT NAMED,NULL; PROTEIN PHOSPHATASE 2C,NULL; no
des,CUFF.22159.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g031360.1 | protein phosphatase 2C family protein | HC | c...   152   8e-38
Medtr5g019790.1 | protein phosphatase 2C family protein | HC | c...    63   9e-11
Medtr1g022030.1 | protein phosphatase 2C family protein | HC | c...    62   2e-10
Medtr2g008590.1 | SpoIIE-like protein phosphatase domain protein...    55   3e-08

>Medtr3g031360.1 | protein phosphatase 2C family protein | HC |
           chr3:26807600-26811666 | 20130731
          Length = 309

 Score =  152 bits (385), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 93/102 (91%), Gaps = 1/102 (0%)

Query: 49  VCNVELIEGDTIVMGSDGLFDNVFDHEILQTISRYKDVAEAAKELANLASSHATDSNFDS 108
           V NVEL+EGDTIVMGSDGLFDNVFDHEI  T++  K+V+EAAK LANLA+SH+ DSNFDS
Sbjct: 209 VSNVELMEGDTIVMGSDGLFDNVFDHEIALTVAN-KEVSEAAKALANLANSHSMDSNFDS 267

Query: 109 PYSLEARSKGFEAPLWKKILGMKLTGGKLDDITVIVSQVVSS 150
           PYSLEAR+KGFEAP WKK+LGMKLTGGKLDDITV+V QVV+S
Sbjct: 268 PYSLEARAKGFEAPWWKKVLGMKLTGGKLDDITVVVGQVVNS 309


>Medtr5g019790.1 | protein phosphatase 2C family protein | HC |
           chr5:7504361-7501168 | 20130731
          Length = 450

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 16/113 (14%)

Query: 42  LTSAGKQVCNVELIEGDTIVMGSDGLFDNVFDHEILQTI---SRYKDVAEA-AKELANLA 97
           L S+G +V  V +  GD IV G+DGLFDN+++++I+  +   +R +   +A A+++A LA
Sbjct: 347 LPSSG-EVFTVPVAPGDIIVAGTDGLFDNMYNNDIVGVVVGATRARLGPQATAQKIAALA 405

Query: 98  SSHATDSNFDSPYSLEARSKGFEAPLWKKILGMKLTGGKLDDITVIVSQVVSS 150
              A D+   SP+S  A   G+           +  GGKLDD+TV+VS + +S
Sbjct: 406 RQRALDTKRQSPFSAAALEYGY-----------RFDGGKLDDLTVVVSYISNS 447


>Medtr1g022030.1 | protein phosphatase 2C family protein | HC |
           chr1:6782301-6777081 | 20130731
          Length = 508

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 16/113 (14%)

Query: 42  LTSAGKQVCNVELIEGDTIVMGSDGLFDNVFDHEILQTISRYKDVAEA----AKELANLA 97
           L S+G QV  V +  GD IV G+DGLFDN++++EI   +        +    A+++A LA
Sbjct: 405 LPSSG-QVFTVAVAPGDVIVAGTDGLFDNLYNNEITAVVVHGVRAGFSPQVTAQKIAALA 463

Query: 98  SSHATDSNFDSPYSLEARSKGFEAPLWKKILGMKLTGGKLDDITVIVSQVVSS 150
              A D +  +P+S  A+  GF           +  GGKLDD TV+VS +  S
Sbjct: 464 RQRALDKDRQTPFSTAAQDAGF-----------RYYGGKLDDTTVVVSYITGS 505


>Medtr2g008590.1 | SpoIIE-like protein phosphatase domain protein | LC
            | chr2:1549840-1541912 | 20130731
          Length = 1256

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 12/99 (12%)

Query: 52   VELIEGDTIVMGSDGLFDNVFDHEILQTISRYKDVAEAAKELANLASSHATDSNFDSPYS 111
            ++L +GD IV G++GLFDN+++ EI  T+S+    +   +E+A + ++ A +        
Sbjct: 1164 IDLNDGDMIVFGTNGLFDNLYEKEIASTVSKSLQFSLKPQEIAEILATTAQEV------- 1216

Query: 112  LEARSKGFEAPLWK--KILG-MKLTGGKLDDITVIVSQV 147
               RS+   +P     + LG +   GGKLDD+TVIVS V
Sbjct: 1217 --GRSRSTRSPFGDAAQALGYVGYAGGKLDDVTVIVSLV 1253