Miyakogusa Predicted Gene

Lj0g3v0325929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325929.1 CUFF.22151.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075770.1 | plastocyanin-like domain protein | HC | chr7:2...   208   2e-54
Medtr5g088990.1 | plastocyanin-like domain protein | HC | chr5:3...   103   7e-23
Medtr6g023760.1 | plastocyanin-like domain protein | HC | chr6:8...    56   2e-08
Medtr3g099580.1 | plastocyanin-like domain protein | HC | chr3:4...    55   6e-08
Medtr3g099980.1 | plastocyanin-like domain protein | HC | chr3:4...    54   7e-08
Medtr3g099680.1 | plastocyanin-like domain protein | HC | chr3:4...    54   1e-07
Medtr6g080660.1 | plastocyanin-like domain protein | LC | chr6:2...    52   4e-07
Medtr8g007035.1 | plastocyanin-like domain protein | HC | chr8:1...    52   4e-07
Medtr2g083250.1 | plastocyanin-like domain protein | HC | chr2:3...    51   6e-07
Medtr3g099570.1 | blue copper-like protein | HC | chr3:45643508-...    50   2e-06
Medtr4g114870.1 | plastocyanin-like domain protein | HC | chr4:4...    48   5e-06
Medtr2g088990.1 | plastocyanin-like domain protein | HC | chr2:3...    48   5e-06
Medtr0334s0010.1 | plastocyanin-like domain protein | HC | scaff...    48   7e-06
Medtr4g007250.1 | plastocyanin-like domain protein | HC | chr4:1...    47   9e-06

>Medtr7g075770.1 | plastocyanin-like domain protein | HC |
           chr7:28422660-28423711 | 20130731
          Length = 208

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/187 (55%), Positives = 131/187 (70%), Gaps = 11/187 (5%)

Query: 25  GYHNHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVY 84
           GY NHTVGG +GW FN++T+  + NYSSWAS+Q+FNLGD+LIFNTNSNQ+VI TYN+T Y
Sbjct: 23  GYKNHTVGGTSGWLFNSSTNTSATNYSSWASSQSFNLGDYLIFNTNSNQSVILTYNKTAY 82

Query: 85  RNCTADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIK 144
            +CTADDSD GTFIY+GG  +FSE LT+ VPLTIVGPNY+FSD   +G+QC+ G+AF+I 
Sbjct: 83  TSCTADDSDVGTFIYNGGTNNFSETLTIPVPLTIVGPNYFFSD-TNEGVQCQHGLAFQID 141

Query: 145 VQRGXXXXXXXXXXXXXXXXXXXXXDTAQSPPITVDQSPTGAA----------VYGFAAA 194
           VQRG                     D+  SPPIT+ Q+P+G A          VYGF  A
Sbjct: 142 VQRGIGLPPSLNQPPPPPYAEPPGADSVDSPPITIPQTPSGGAFARRVDVRVVVYGFCVA 201

Query: 195 VLLLRFW 201
           +LL++FW
Sbjct: 202 MLLVKFW 208


>Medtr5g088990.1 | plastocyanin-like domain protein | HC |
           chr5:38643152-38645471 | 20130731
          Length = 240

 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 6/127 (4%)

Query: 25  GYHNHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVY 84
            Y N+TVG + GWF N    KP+ NY  W + + F+LGDFLIFNT++N +++QTYN T Y
Sbjct: 30  AYKNYTVGDSLGWFDNL--EKPTVNYQKWVAKKQFSLGDFLIFNTDNNHSLVQTYNFTTY 87

Query: 85  RNCTADDS-DNGTFIYSGGGASFSE--ALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAF 141
           + C  DD+ D  T  +S    S ++   +TV VPL   G  Y+FS +  DG QC++G  F
Sbjct: 88  KQCDYDDAQDKDTIQWSSVDPSNTDIHPVTVAVPLLKEGATYFFS-SDYDGEQCKNGQHF 146

Query: 142 EIKVQRG 148
           +I V  G
Sbjct: 147 KINVTHG 153


>Medtr6g023760.1 | plastocyanin-like domain protein | HC |
           chr6:8345768-8347436 | 20130731
          Length = 179

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 21/121 (17%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
            H VGG+ GW        PS+++ SW+S QTF +GD L+F   S  +V++  +E+ Y+ C
Sbjct: 25  QHNVGGSQGW-------DPSSDFDSWSSGQTFKVGDQLVFKYTSMHSVVELSDESAYKKC 77

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKVQR 147
                 N          S S    V V L   G  Y+     G    C  GM  +I V  
Sbjct: 78  DISTPLN----------SLSTGKDV-VKLDKPGTRYFTCGTLG---HCDQGMKVKITVGN 123

Query: 148 G 148
           G
Sbjct: 124 G 124


>Medtr3g099580.1 | plastocyanin-like domain protein | HC |
           chr3:45650942-45649884 | 20130731
          Length = 186

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 22/118 (18%)

Query: 29  HTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNCT 88
           HTVG  +GW          ++Y++WAS +TF +GD L+FN  +  TV +   E+ Y++CT
Sbjct: 26  HTVGDKSGWAIG-------SDYNTWASDKTFAVGDSLVFNYGAGHTVDEV-KESDYKSCT 77

Query: 89  ADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKVQ 146
                      +G   S   +    +PL   G +Y+     G    C  GM   +KV+
Sbjct: 78  -----------TGNSISTDSSGPTTIPLKKAGTHYFICAVPG---HCTGGMKLSVKVK 121


>Medtr3g099980.1 | plastocyanin-like domain protein | HC |
           chr3:45886634-45887385 | 20130731
          Length = 218

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 22/120 (18%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
           NH VG   GW  +       ++Y++WAS +TF +GD L+FN  +    +   NE+ Y +C
Sbjct: 25  NHIVGDGLGWTVD-------SDYTTWASDKTFVVGDSLVFNYEAGWHTVDEVNESDYNSC 77

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRS-GMAFEIKVQ 146
           T  +S +      G GA+        +PL   G +Y+        + C S GM   +KVQ
Sbjct: 78  TTRNSIST----DGSGAT-------TIPLKKAGTHYFICAVP---VHCISGGMKLSVKVQ 123


>Medtr3g099680.1 | plastocyanin-like domain protein | HC |
           chr3:45702791-45703579 | 20130731
          Length = 220

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 22/120 (18%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
           NH VG   GW  +       ++Y++WAS +TF +GD L+FN  +    +    E+ Y++C
Sbjct: 25  NHIVGDGLGWTVD-------SDYTTWASDKTFVVGDSLVFNYEAGWHTVDEVRESDYQSC 77

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRS-GMAFEIKVQ 146
           T  +S +      G GA+        +PL   G +Y+        + C S GM   +KVQ
Sbjct: 78  TTRNSIST----DGSGAT-------TIPLKKAGTHYFICAVP---VHCISGGMKLSVKVQ 123


>Medtr6g080660.1 | plastocyanin-like domain protein | LC |
           chr6:29008927-29007242 | 20130731
          Length = 210

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 22/119 (18%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
           NHTVGGA+ W          +N   WAST++FN+GD L+F       VI+  N+  Y  C
Sbjct: 27  NHTVGGASAW-------DLESNMQDWASTESFNVGDDLVFTYTPLYDVIEV-NQQGYNTC 78

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKVQ 146
           T  ++           ++ +   TV + LT  G  Y+     G    C+ G+  E+KVQ
Sbjct: 79  TIANAI----------STHNTGETV-IHLTESGTRYFVCGRMG---HCQQGLKLEVKVQ 123


>Medtr8g007035.1 | plastocyanin-like domain protein | HC |
           chr8:1186900-1188335 | 20130731
          Length = 199

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 24/120 (20%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
           + TVG A GW           +Y+ WAS +TF +GD L+F   S+  V +  +E+ Y++C
Sbjct: 23  DFTVGDANGW-------NLGVDYTKWASGKTFKVGDNLVFKYGSSHQVDEV-DESDYKSC 74

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRS--GMAFEIKV 145
           T   S N    Y+GG +        +VPLT  G  Y+     G    C S  GM  E+ V
Sbjct: 75  T---SSNAIKNYAGGNS--------KVPLTKAGKIYFICPTLG---HCTSTGGMKLEVNV 120


>Medtr2g083250.1 | plastocyanin-like domain protein | HC |
           chr2:34952102-34954240 | 20130731
          Length = 261

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 16/106 (15%)

Query: 31  VGGAAGWFFNTTTSKPSAN-YSSWASTQTFNLGDFLIFNTNSNQ-TVIQTYNETVYRNCT 88
           VGG  GW   +  S P+AN Y+ WA    F +GD L+FN  S Q +VIQ  ++  Y NC 
Sbjct: 28  VGGQKGW---SAPSDPNANPYNQWAEKSRFQVGDSLVFNYQSGQDSVIQVTSQQDYENCN 84

Query: 89  ADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQ 134
            D S   +          S+  TV + L   GP+Y+ S    + +Q
Sbjct: 85  TDASSEKS----------SDGHTV-IKLIKSGPHYFISGNKNNCLQ 119


>Medtr3g099570.1 | blue copper-like protein | HC |
           chr3:45643508-45642850 | 20130731
          Length = 184

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 22/119 (18%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
           NH VG   GW     T  P  +Y++W S +TF +GD L+FN  +  TV +   E+ Y++C
Sbjct: 25  NHIVGDGLGW-----TVGP--DYNTWTSDKTFAVGDSLVFNYVAGHTVDEV-KESDYKSC 76

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKVQ 146
           T           +G   S   +    +PL   G +Y+     G    C  GM   +KV+
Sbjct: 77  T-----------TGNSISTDSSGATTIPLKEAGTHYFICAIPG---HCTFGMKLFVKVK 121


>Medtr4g114870.1 | plastocyanin-like domain protein | HC |
           chr4:47332652-47334953 | 20130731
          Length = 370

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 17/121 (14%)

Query: 25  GYHNHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVY 84
           G   +TVG   GW      S  +A Y++WAS ++F +GD L+FN   N   ++   +  Y
Sbjct: 187 GRVTYTVGDTIGWII---PSNGTAAYTTWASGKSFKVGDILVFNFQLNAHNVEEVTKEKY 243

Query: 85  RNCTADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIK 144
            +C +              A+FS    VRV L   G +YY     G    C +G    I 
Sbjct: 244 DSCNSTSPI----------ATFSNP-PVRVTLNKTGTHYYICGVPG---HCSAGQKLSIN 289

Query: 145 V 145
           V
Sbjct: 290 V 290


>Medtr2g088990.1 | plastocyanin-like domain protein | HC |
           chr2:37537716-37538597 | 20130731
          Length = 228

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 23/117 (19%)

Query: 28  NHTVGGA-AGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRN 86
           NH VGG   GW  N+       N  SW S+Q F++GD LIF    N  V++   +  Y +
Sbjct: 24  NHIVGGPIGGWDTNS-------NLQSWTSSQQFSVGDNLIFQYPPNHDVVEV-TKADYDS 75

Query: 87  CTADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEI 143
           C      N    Y+ G  S        +PLT  G  Y+     G    C  GM  EI
Sbjct: 76  C---QQTNPIQSYNDGATS--------IPLTSTGKRYFICGTIG---HCSQGMKVEI 118


>Medtr0334s0010.1 | plastocyanin-like domain protein | HC |
           scaffold0334:3468-6498 | 20130731
          Length = 200

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 23/120 (19%)

Query: 28  NHTVGGAAGWFFNTTTSKPSAN--YSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYR 85
           +HTVGG  GW      S PS    YS WA++ TF   D L+FN     TV +  ++  + 
Sbjct: 27  DHTVGGTTGW------SVPSGASFYSDWAASNTFKQNDVLVFNFAGGHTVAEV-SKADFD 79

Query: 86  NCTADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKV 145
           NC  +   NG  I +G           RV L   G  Y+     G    C SG    +KV
Sbjct: 80  NCNIN--QNGLVITTGPA---------RVTLNRTGDFYFICTIQG---HCSSGQKLSVKV 125


>Medtr4g007250.1 | plastocyanin-like domain protein | HC |
           chr4:1058046-1054244 | 20130731
          Length = 171

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 22/119 (18%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
           +H VG   GW        P  NY+ WA+  T  +GD++ F    NQ  +   N+T Y NC
Sbjct: 28  DHIVGANRGW-------NPGINYTLWANNHTIYVGDYISFRYQKNQYNVFLVNQTGYDNC 80

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKVQ 146
           T D +        G  +S  + +     +      YYF    G+G QC +GM   + V 
Sbjct: 81  TLDSA-------VGNWSSGKDFILFNKSMR-----YYF--ICGNG-QCNNGMKVSVFVH 124