Miyakogusa Predicted Gene

Lj0g3v0325869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325869.1 Non Characterized Hit- tr|D7U2W3|D7U2W3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,32.5,0.0000000000005,SUBFAMILY NOT NAMED,NULL;
NFRKB-RELATED,Nuclear factor related to kappa-B-binding protein;
seg,NULL,CUFF.22145.1
         (389 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096000.2 | DNA-binding protein, putative | HC | chr2:4096...   502   e-142
Medtr2g096000.1 | DNA-binding protein, putative | HC | chr2:4097...   502   e-142
Medtr6g033235.1 | hypothetical protein | HC | chr6:10522219-1053...    77   2e-14
Medtr7g084170.3 | hypothetical protein | HC | chr7:32457372-3246...    76   5e-14
Medtr7g084170.2 | hypothetical protein | HC | chr7:32457371-3246...    76   5e-14
Medtr7g084170.4 | hypothetical protein | HC | chr7:32457371-3246...    76   5e-14
Medtr7g084170.1 | hypothetical protein | HC | chr7:32458921-3246...    76   5e-14

>Medtr2g096000.2 | DNA-binding protein, putative | HC |
           chr2:40969983-40975546 | 20130731
          Length = 1346

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/391 (67%), Positives = 293/391 (74%), Gaps = 10/391 (2%)

Query: 1   MAIEKNSFKVTRLDSEGSPLSRETMSS-DEDEARRGNSAVXXXXXXXXXXXXXXXXXXXX 59
           MAIEKNSFKV+R+D+E  P+S+E+MSS DE++ +R NS                      
Sbjct: 2   MAIEKNSFKVSRVDTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDD 61

Query: 60  XXLLELGETGAEFCQIGNQTCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLPD 119
             LLELGETGAEFCQIGNQTCSIPLELYDL+GLEDILSVDVWN+ LSEEER ELAKYLPD
Sbjct: 62  FDLLELGETGAEFCQIGNQTCSIPLELYDLSGLEDILSVDVWNDCLSEEERFELAKYLPD 121

Query: 120 VDQETFVQSLRELFTGCNLHFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLL 179
           +DQETFVQ+L+ELFTGCN  FGSPVKKLFDMLKGGLCEPRVALYREGLN  QK+QHYHLL
Sbjct: 122 MDQETFVQTLKELFTGCNFQFGSPVKKLFDMLKGGLCEPRVALYREGLNFVQKRQHYHLL 181

Query: 180 RKHQNNMVSSLCQIRDAWRNCRGYSIEERLRVLNITRSQKSLMYXXXXXXXXXXXXXXXX 239
           +KHQN MVS+LCQ+RDAW NCRGYSIEERLRVLNI  SQKSLM                 
Sbjct: 182 KKHQNTMVSNLCQMRDAWLNCRGYSIEERLRVLNIMTSQKSLMGEKMDDLEADSSEESGE 241

Query: 240 VIWSRKNKDRKSAAQKTGRYPLHGVGSGLELQPRGRSAVLEQEKYGKQNPKGILKLAGPK 299
            +WSRKNKD+K+ AQK GR+P  GVGSGL+  PR +S V+EQEKY KQNPKGILKLAG K
Sbjct: 242 GMWSRKNKDKKN-AQKLGRFPFQGVGSGLDFHPREQSMVMEQEKYSKQNPKGILKLAGSK 300

Query: 300 IPSAKDPTGNFSSAYHALDMNPGLNGSASALSKLNKSVGYDSGSMLRMRDQL-NGDNDDE 358
              AKDPT + SS YH LDMNP LNGSA A  + N S GYD GS+ R RDQL NGDN +E
Sbjct: 301 THLAKDPTAHSSSVYHGLDMNPRLNGSAFAHPQHNISTGYDLGSIRRTRDQLWNGDN-EE 359

Query: 359 EISYGLGIHRDRNVSRANLMMDKSSDPRVGR 389
           EISY     RDRN  R +L MD SS  RVG+
Sbjct: 360 EISY-----RDRNALRGSL-MDMSSALRVGK 384


>Medtr2g096000.1 | DNA-binding protein, putative | HC |
           chr2:40970730-40974851 | 20130731
          Length = 1373

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/391 (67%), Positives = 293/391 (74%), Gaps = 10/391 (2%)

Query: 1   MAIEKNSFKVTRLDSEGSPLSRETMSS-DEDEARRGNSAVXXXXXXXXXXXXXXXXXXXX 59
           MAIEKNSFKV+R+D+E  P+S+E+MSS DE++ +R NS                      
Sbjct: 1   MAIEKNSFKVSRVDTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDD 60

Query: 60  XXLLELGETGAEFCQIGNQTCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLPD 119
             LLELGETGAEFCQIGNQTCSIPLELYDL+GLEDILSVDVWN+ LSEEER ELAKYLPD
Sbjct: 61  FDLLELGETGAEFCQIGNQTCSIPLELYDLSGLEDILSVDVWNDCLSEEERFELAKYLPD 120

Query: 120 VDQETFVQSLRELFTGCNLHFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLL 179
           +DQETFVQ+L+ELFTGCN  FGSPVKKLFDMLKGGLCEPRVALYREGLN  QK+QHYHLL
Sbjct: 121 MDQETFVQTLKELFTGCNFQFGSPVKKLFDMLKGGLCEPRVALYREGLNFVQKRQHYHLL 180

Query: 180 RKHQNNMVSSLCQIRDAWRNCRGYSIEERLRVLNITRSQKSLMYXXXXXXXXXXXXXXXX 239
           +KHQN MVS+LCQ+RDAW NCRGYSIEERLRVLNI  SQKSLM                 
Sbjct: 181 KKHQNTMVSNLCQMRDAWLNCRGYSIEERLRVLNIMTSQKSLMGEKMDDLEADSSEESGE 240

Query: 240 VIWSRKNKDRKSAAQKTGRYPLHGVGSGLELQPRGRSAVLEQEKYGKQNPKGILKLAGPK 299
            +WSRKNKD+K+ AQK GR+P  GVGSGL+  PR +S V+EQEKY KQNPKGILKLAG K
Sbjct: 241 GMWSRKNKDKKN-AQKLGRFPFQGVGSGLDFHPREQSMVMEQEKYSKQNPKGILKLAGSK 299

Query: 300 IPSAKDPTGNFSSAYHALDMNPGLNGSASALSKLNKSVGYDSGSMLRMRDQL-NGDNDDE 358
              AKDPT + SS YH LDMNP LNGSA A  + N S GYD GS+ R RDQL NGDN +E
Sbjct: 300 THLAKDPTAHSSSVYHGLDMNPRLNGSAFAHPQHNISTGYDLGSIRRTRDQLWNGDN-EE 358

Query: 359 EISYGLGIHRDRNVSRANLMMDKSSDPRVGR 389
           EISY     RDRN  R +L MD SS  RVG+
Sbjct: 359 EISY-----RDRNALRGSL-MDMSSALRVGK 383


>Medtr6g033235.1 | hypothetical protein | HC |
           chr6:10522219-10530937 | 20130731
          Length = 962

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 2/123 (1%)

Query: 79  TCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLPDVDQETFVQSLRELFTGCNL 138
             ++P E++DL  L ++LS +VWN  LSE ER  L  +LP   +    Q++ +L  G + 
Sbjct: 84  VVTVPEEIFDLDNLSEVLSYEVWNTHLSENERNHLMNFLPRGIEPH--QAVEDLLAGTDF 141

Query: 139 HFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLLRKHQNNMVSSLCQIRDAWR 198
            FGSPV      +  G   P + + +E     QK+ +Y  L  + N+M+  L ++++ W+
Sbjct: 142 DFGSPVLNWGASVCSGDLHPDIVVGQEQHLKSQKRAYYRQLHNYHNDMIGFLSKLKERWQ 201

Query: 199 NCR 201
           +CR
Sbjct: 202 SCR 204


>Medtr7g084170.3 | hypothetical protein | HC |
           chr7:32457372-32465667 | 20130731
          Length = 982

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 79  TCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLP-DVDQETFVQSLRELFTGCN 137
             ++P E++ L  L ++LS +VWN  LS++ER  L ++LP D++    VQ   EL +G  
Sbjct: 89  VLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNFLKQFLPGDLEPNQVVQ---ELLSGDE 145

Query: 138 LHFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLLRKHQNNMVSSLCQIRDAW 197
           LHFG+P  K    L  G   P + +Y E      ++ ++  LRK+  +M+  L ++++ W
Sbjct: 146 LHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRAYFSQLRKYHKDMIGFLIKLKERW 205

Query: 198 RNCRGYSIEERLRVL 212
             C+    E   ++L
Sbjct: 206 ETCKNSEKEILPKIL 220


>Medtr7g084170.2 | hypothetical protein | HC |
           chr7:32457371-32465667 | 20130731
          Length = 982

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 79  TCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLP-DVDQETFVQSLRELFTGCN 137
             ++P E++ L  L ++LS +VWN  LS++ER  L ++LP D++    VQ   EL +G  
Sbjct: 89  VLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNFLKQFLPGDLEPNQVVQ---ELLSGDE 145

Query: 138 LHFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLLRKHQNNMVSSLCQIRDAW 197
           LHFG+P  K    L  G   P + +Y E      ++ ++  LRK+  +M+  L ++++ W
Sbjct: 146 LHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRAYFSQLRKYHKDMIGFLIKLKERW 205

Query: 198 RNCRGYSIEERLRVL 212
             C+    E   ++L
Sbjct: 206 ETCKNSEKEILPKIL 220


>Medtr7g084170.4 | hypothetical protein | HC |
           chr7:32457371-32465584 | 20130731
          Length = 982

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 79  TCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLP-DVDQETFVQSLRELFTGCN 137
             ++P E++ L  L ++LS +VWN  LS++ER  L ++LP D++    VQ   EL +G  
Sbjct: 89  VLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNFLKQFLPGDLEPNQVVQ---ELLSGDE 145

Query: 138 LHFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLLRKHQNNMVSSLCQIRDAW 197
           LHFG+P  K    L  G   P + +Y E      ++ ++  LRK+  +M+  L ++++ W
Sbjct: 146 LHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRAYFSQLRKYHKDMIGFLIKLKERW 205

Query: 198 RNCRGYSIEERLRVL 212
             C+    E   ++L
Sbjct: 206 ETCKNSEKEILPKIL 220


>Medtr7g084170.1 | hypothetical protein | HC |
           chr7:32458921-32465350 | 20130731
          Length = 980

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 79  TCSIPLELYDLAGLEDILSVDVWNEILSEEERLELAKYLP-DVDQETFVQSLRELFTGCN 137
             ++P E++ L  L ++LS +VWN  LS++ER  L ++LP D++    VQ   EL +G  
Sbjct: 87  VLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNFLKQFLPGDLEPNQVVQ---ELLSGDE 143

Query: 138 LHFGSPVKKLFDMLKGGLCEPRVALYREGLNVFQKKQHYHLLRKHQNNMVSSLCQIRDAW 197
           LHFG+P  K    L  G   P + +Y E      ++ ++  LRK+  +M+  L ++++ W
Sbjct: 144 LHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRAYFSQLRKYHKDMIGFLIKLKERW 203

Query: 198 RNCRGYSIEERLRVL 212
             C+    E   ++L
Sbjct: 204 ETCKNSEKEILPKIL 218