Miyakogusa Predicted Gene

Lj0g3v0324989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324989.1 Non Characterized Hit- tr|I3SBA3|I3SBA3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.47,0,Clavaminate synthase-like,NULL;
FE2OG_OXY,Oxoglutarate/iron-dependent dioxygenase; SUBFAMILY NOT
NAM,CUFF.22085.1
         (262 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g059320.1 | 2OG-Fe(II) oxygenase family protein | HC | chr...   427   e-120
Medtr5g026030.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    49   5e-06

>Medtr6g059320.1 | 2OG-Fe(II) oxygenase family protein | HC |
           chr6:20369054-20363863 | 20130731
          Length = 266

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/258 (77%), Positives = 230/258 (89%)

Query: 5   EKLSCYKVGSLPTVFYVPDFITDSEETFLLHNIYGVNASKWKPMKNRRLQNWGGVVHEKG 64
           + LS +KVGSLPT+FY+PDFI+D+++T LL+NIYG  +SKWK +KNRRLQNWGGVVHEKG
Sbjct: 9   QNLSDFKVGSLPTLFYIPDFISDTDQTLLLNNIYGAPSSKWKLLKNRRLQNWGGVVHEKG 68

Query: 65  LLPQPLPPWLTNLTKRMYEELGLFPSPLNHVLINEYLPNQGIMPHQDGPAYFPVVAILSL 124
           LLPQPLP WLTN T+++ EE GLFPSP+NHVLINEY PNQGIMPHQDGP+YFPVVAILSL
Sbjct: 69  LLPQPLPSWLTNFTQKISEESGLFPSPINHVLINEYQPNQGIMPHQDGPSYFPVVAILSL 128

Query: 125 GSPAVMDFTPHARLKLDSQDNTDKDSEGGTLEIGEEKWLDDHHPFSVLLMPRSLLIFKDQ 184
           GSP VMDFTPHA+LKLDSQ+ TDK+S+G T EIG++KWLDDH PFSV+LMPRSLLIFKD+
Sbjct: 129 GSPVVMDFTPHAKLKLDSQEVTDKESDGETFEIGKDKWLDDHRPFSVILMPRSLLIFKDK 188

Query: 185 AYSDYLHGIQDSAVHCYDGVINETEALKYKESDGHHCSSEEALETIGKEECKNIPRTSNR 244
           AYSDYLHGI+D A+H YDG +NE EALK+ ESD H   SE+ALE IGKEE KNI RTSNR
Sbjct: 189 AYSDYLHGIKDCALHGYDGAVNEIEALKHNESDKHLFGSEDALEAIGKEEYKNISRTSNR 248

Query: 245 VSLTCRMVPKVHKNLFRF 262
           +SLTCR+VPKVHKNLFRF
Sbjct: 249 ISLTCRLVPKVHKNLFRF 266


>Medtr5g026030.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:10667734-10673201 | 20130731
          Length = 344

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 17/132 (12%)

Query: 14  SLPTVFYVPDFITDSEETFLLHNIYGVNASKWKPMKNRRLQNWG-------GVVHEKGLL 66
           ++P ++ + DF++ +EE  LL +   V++  W  +  RR+Q++G         V+ K  L
Sbjct: 117 NIPGLYLLHDFVSATEEEELLQS---VDSRPWNSLAKRRVQHYGYEFCYDIRNVNTKRCL 173

Query: 67  PQPLPPWLTNLTKRM-----YEELGLFPSPLNHVLINEYLPNQGIMPHQDGPAYFP-VVA 120
            + LP +L+ + +R+     ++        L+ + +NEY P  G+ PH D  + F  ++ 
Sbjct: 174 GE-LPSFLSPILERISSCPTFKNADPDRIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIF 232

Query: 121 ILSLGSPAVMDF 132
            LSL  P +M+F
Sbjct: 233 SLSLAGPCIMEF 244