Miyakogusa Predicted Gene

Lj0g3v0324599.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324599.2 Non Characterized Hit- tr|I0Z1V0|I0Z1V0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,35.64,6e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.22081.2
         (202 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g039290.3 | NOD3, putative | HC | chr8:14616073-14621223 |...   353   6e-98
Medtr8g039290.1 | NOD3, putative | HC | chr8:14616073-14621301 |...   353   6e-98
Medtr8g039290.4 | NOD3, putative | HC | chr8:14615940-14621301 |...   353   6e-98
Medtr8g039290.2 | NOD3, putative | HC | chr8:14615952-14621223 |...   347   5e-96
Medtr5g089520.1 | NOD3, putative | HC | chr5:38918246-38911596 |...   307   4e-84
Medtr1g012920.1 | transmembrane protein, putative | HC | chr1:27...   291   3e-79

>Medtr8g039290.3 | NOD3, putative | HC | chr8:14616073-14621223 |
           20130731
          Length = 360

 Score =  353 bits (906), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 166/201 (82%), Positives = 177/201 (88%)

Query: 1   MAEPDHVFVRPLPNLAYGENPAAFPFFYIRPDQNEKIIRKYYPEEKGPVTNIDPIGNSPV 60
           MAEPDHVFVRPLPNLA+GENPAAFPFFYI+P +NEKI+RKYYPEE GPVTN+DPIGNSPV
Sbjct: 159 MAEPDHVFVRPLPNLAFGENPAAFPFFYIKPKENEKIVRKYYPEENGPVTNVDPIGNSPV 218

Query: 61  IIKTDVIAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQ 120
           II+ D+IAKIAPTWMN+S+KMKEDPETDKAFGWVLEMY YA+ASALHGVRHILRKDFMLQ
Sbjct: 219 IIRKDLIAKIAPTWMNISMKMKEDPETDKAFGWVLEMYGYAVASALHGVRHILRKDFMLQ 278

Query: 121 PPWDLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHXXXXXXXXXXXXXXXXXE 180
           PPWD ET NKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSH                 E
Sbjct: 279 PPWDTETFNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPE 338

Query: 181 SVVTLVKMVNEATANIPNWDT 201
           SV TLVKMVNEA+ANIPNWDT
Sbjct: 339 SVATLVKMVNEASANIPNWDT 359


>Medtr8g039290.1 | NOD3, putative | HC | chr8:14616073-14621301 |
           20130731
          Length = 360

 Score =  353 bits (906), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 166/201 (82%), Positives = 177/201 (88%)

Query: 1   MAEPDHVFVRPLPNLAYGENPAAFPFFYIRPDQNEKIIRKYYPEEKGPVTNIDPIGNSPV 60
           MAEPDHVFVRPLPNLA+GENPAAFPFFYI+P +NEKI+RKYYPEE GPVTN+DPIGNSPV
Sbjct: 159 MAEPDHVFVRPLPNLAFGENPAAFPFFYIKPKENEKIVRKYYPEENGPVTNVDPIGNSPV 218

Query: 61  IIKTDVIAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQ 120
           II+ D+IAKIAPTWMN+S+KMKEDPETDKAFGWVLEMY YA+ASALHGVRHILRKDFMLQ
Sbjct: 219 IIRKDLIAKIAPTWMNISMKMKEDPETDKAFGWVLEMYGYAVASALHGVRHILRKDFMLQ 278

Query: 121 PPWDLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHXXXXXXXXXXXXXXXXXE 180
           PPWD ET NKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSH                 E
Sbjct: 279 PPWDTETFNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPE 338

Query: 181 SVVTLVKMVNEATANIPNWDT 201
           SV TLVKMVNEA+ANIPNWDT
Sbjct: 339 SVATLVKMVNEASANIPNWDT 359


>Medtr8g039290.4 | NOD3, putative | HC | chr8:14615940-14621301 |
           20130731
          Length = 360

 Score =  353 bits (906), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 166/201 (82%), Positives = 177/201 (88%)

Query: 1   MAEPDHVFVRPLPNLAYGENPAAFPFFYIRPDQNEKIIRKYYPEEKGPVTNIDPIGNSPV 60
           MAEPDHVFVRPLPNLA+GENPAAFPFFYI+P +NEKI+RKYYPEE GPVTN+DPIGNSPV
Sbjct: 159 MAEPDHVFVRPLPNLAFGENPAAFPFFYIKPKENEKIVRKYYPEENGPVTNVDPIGNSPV 218

Query: 61  IIKTDVIAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQ 120
           II+ D+IAKIAPTWMN+S+KMKEDPETDKAFGWVLEMY YA+ASALHGVRHILRKDFMLQ
Sbjct: 219 IIRKDLIAKIAPTWMNISMKMKEDPETDKAFGWVLEMYGYAVASALHGVRHILRKDFMLQ 278

Query: 121 PPWDLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHXXXXXXXXXXXXXXXXXE 180
           PPWD ET NKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSH                 E
Sbjct: 279 PPWDTETFNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPE 338

Query: 181 SVVTLVKMVNEATANIPNWDT 201
           SV TLVKMVNEA+ANIPNWDT
Sbjct: 339 SVATLVKMVNEASANIPNWDT 359


>Medtr8g039290.2 | NOD3, putative | HC | chr8:14615952-14621223 |
           20130731
          Length = 359

 Score =  347 bits (889), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 165/201 (82%), Positives = 176/201 (87%), Gaps = 1/201 (0%)

Query: 1   MAEPDHVFVRPLPNLAYGENPAAFPFFYIRPDQNEKIIRKYYPEEKGPVTNIDPIGNSPV 60
           MAEPDHVFVRPLPNLA+GENPAAFPFFYI+P +NEKI+RKYYPEE GPVTN+DPIGNSPV
Sbjct: 159 MAEPDHVFVRPLPNLAFGENPAAFPFFYIKPKENEKIVRKYYPEENGPVTNVDPIGNSPV 218

Query: 61  IIKTDVIAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQ 120
           II+ D+IAKIAPTWMN+S+KMKEDPETDKAFGWVLEMY YA+ASALHGVRHILRKDFMLQ
Sbjct: 219 IIRKDLIAKIAPTWMNISMKMKEDPETDKAFGWVLEMYGYAVASALHGVRHILRKDFMLQ 278

Query: 121 PPWDLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHXXXXXXXXXXXXXXXXXE 180
           PPWD ET NKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSH                 E
Sbjct: 279 PPWDTETFNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHLRGPPPRNLPLPPPGVPE 338

Query: 181 SVVTLVKMVNEATANIPNWDT 201
           S  TLVKMVNEA+ANIPNWDT
Sbjct: 339 S-ATLVKMVNEASANIPNWDT 358


>Medtr5g089520.1 | NOD3, putative | HC | chr5:38918246-38911596 |
           20130731
          Length = 351

 Score =  307 bits (787), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 143/201 (71%), Positives = 168/201 (83%)

Query: 1   MAEPDHVFVRPLPNLAYGENPAAFPFFYIRPDQNEKIIRKYYPEEKGPVTNIDPIGNSPV 60
           MAEPDH+FV PLPNLA    PA +PFFYI+P +NEKI+RK+YP+E GPVT++DPIGNSPV
Sbjct: 147 MAEPDHIFVNPLPNLATENEPAGYPFFYIKPAENEKIMRKFYPKENGPVTDVDPIGNSPV 206

Query: 61  IIKTDVIAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQ 120
           II   ++ +IAPTW+N+SL+MK+DPETDKAFGWVLEMYAYA+ASALHG++HILRKDFMLQ
Sbjct: 207 IIHKYMLEEIAPTWVNISLRMKDDPETDKAFGWVLEMYAYAVASALHGIKHILRKDFMLQ 266

Query: 121 PPWDLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHXXXXXXXXXXXXXXXXXE 180
           PPWDL+   K+IIH+TYGCDYNLKG+LTYGKIGEWRFDKRS+                 E
Sbjct: 267 PPWDLDVGKKFIIHFTYGCDYNLKGKLTYGKIGEWRFDKRSYLMGPPPKNLSLPPPGVPE 326

Query: 181 SVVTLVKMVNEATANIPNWDT 201
           SVV LVKMVNEATANIPNWD+
Sbjct: 327 SVVRLVKMVNEATANIPNWDS 347


>Medtr1g012920.1 | transmembrane protein, putative | HC |
           chr1:2729896-2725208 | 20130731
          Length = 360

 Score =  291 bits (745), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 140/201 (69%), Positives = 160/201 (79%), Gaps = 1/201 (0%)

Query: 1   MAEPDHVFVRPLPNLAYGENPAAFPFFYIRPDQNEKIIRKYYPEEKGPVTNIDPIGNSPV 60
           M+EPDH+ V+P+PNLA     AAFPFFYI P + EK++RKYYPEE GPVTNIDPIGNSPV
Sbjct: 161 MSEPDHIIVKPIPNLARDGMGAAFPFFYIEPKKYEKVLRKYYPEENGPVTNIDPIGNSPV 220

Query: 61  IIKTDVIAKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAIASALHGVRHILRKDFMLQ 120
           I+  + + KIAPTWMNVSL MK+DPETDKAFGWVLEMYAYA++SALHGV +IL KDFM+Q
Sbjct: 221 IVGKESLKKIAPTWMNVSLAMKKDPETDKAFGWVLEMYAYAVSSALHGVGNILHKDFMIQ 280

Query: 121 PPWDLETHNKYIIHYTYGCDYNLKGELTYGKIGEWRFDKRSHXXXXXXXXXXXXXXXXXE 180
           PPWD E    +IIHYTYGCDY++KGELTYGKIGEWRFDKRS+                 E
Sbjct: 281 PPWDKELGKTFIIHYTYGCDYSMKGELTYGKIGEWRFDKRSY-DLVAPKNLTLPPPGVPE 339

Query: 181 SVVTLVKMVNEATANIPNWDT 201
           SVVTLVKMVNEA ANIPNW +
Sbjct: 340 SVVTLVKMVNEAAANIPNWSS 360