Miyakogusa Predicted Gene

Lj0g3v0324319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324319.1 tr|A4RQZ8|A4RQZ8_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_86096,30.69,0.0000000000003,no description,WD40/YVTN
repeat-like-containing domain; WD_REPEATS_1,WD40 repeat, conserved
site; co,CUFF.22034.1
         (683 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g024320.1 | transducin family protein/WD-40 repeat protein...   518   e-147

>Medtr8g024320.1 | transducin family protein/WD-40 repeat protein |
           HC | chr8:8932346-8918975 | 20130731
          Length = 1951

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/343 (74%), Positives = 265/343 (77%), Gaps = 1/343 (0%)

Query: 341 HASTGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDADNAVSRVISSHTFRREHGSAQVLA 400
           +ASTGLHLEEGAAAQPMRLEGVRRGS TLGYFDVDADNA++RVISS  FRREHGSAQVL 
Sbjct: 385 NASTGLHLEEGAAAQPMRLEGVRRGSITLGYFDVDADNAITRVISSQNFRREHGSAQVLV 444

Query: 401 VHANYIAVGMAKGLIVVVPSKYSIHHADNTDGKMLMLAIQGDRSHAPVTSMSFNQQGDLL 460
           VHANYIAVGM +GLIVVVPSKYSIHH DNTDGKMLML IQGDRS APVTSMSFNQQGDLL
Sbjct: 445 VHANYIAVGMTRGLIVVVPSKYSIHHVDNTDGKMLMLGIQGDRSQAPVTSMSFNQQGDLL 504

Query: 461 LAGYGDGHVTFWDVQKGVVAKVINGEHTTPVVHILFLGQDPQNNRQFKAVTGDCKGLVLL 520
           LAGYGDGHVT WDVQKGV  KVI+GEHT PVVH  FLGQDPQN RQFKAVTGDCKGLVLL
Sbjct: 505 LAGYGDGHVTLWDVQKGVAVKVISGEHTAPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLL 564

Query: 521 HSISVVPLLNRFNIKSQCLLDGQRTGLVLSASPLIFDEFSGSASPYSQGNTXXXXXXXXX 580
           H IS+V L+NRFN K+QCLLDGQ TGLVLSASPL   EF GS S YSQGNT         
Sbjct: 565 HHISMVVLINRFNFKTQCLLDGQNTGLVLSASPLFSGEFGGSPS-YSQGNTMVSASSISS 623

Query: 581 XXXXXXXXXXXWKLFNXXXXXXXXXXXXXXTHQTALVVRLSPKLEVYAQISRPDGIREGS 640
                      WKLFN              THQTALVVRLSP L  YAQ+ RP+GIREGS
Sbjct: 624 MVGGVVGGDAGWKLFNEGSSLVEEGVVVFVTHQTALVVRLSPSLVAYAQLPRPNGIREGS 683

Query: 641 MPYTAWKYMAQXXXXXXXXXXXXXARVSLLAIAWERKVQVAKL 683
           MPYTAWKYM Q              RVSLLAIAWERKVQVA+L
Sbjct: 684 MPYTAWKYMTQTSSSTENASAETVERVSLLAIAWERKVQVARL 726



 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 115/330 (34%), Gaps = 93/330 (28%)

Query: 21  MELDLRSFIPSLAADTDDADDGP--HRTIDEILNECDTXXXXXXXXXXXXXXXXXXXXXX 78
           MELDLRSF+P    D  + D  P  HRT+DEILN+C +                      
Sbjct: 1   MELDLRSFLP----DDTETDLPPIHHRTVDEILNDCSSSSSSSSSPSPSPPPSPSPSNN- 55

Query: 79  XEPVPFSRVKPAQFPNPTRA------------------PRPFSSLLDRIRPNTKXXXXXX 120
                    KP  FP P  A                  PR FSSL  R+ PN K      
Sbjct: 56  ---------KPTHFPQPVPASISDRVVQNVRVGDKPPRPRLFSSLFGRVTPNAKPGAALA 106

Query: 121 XXXXXXXXXXXXXXXXIISRRKVVAXXXXXXXXXXXXXXXXXXXXELGEKIDRKVENIDN 180
                           I+ RR++                      E GEKI+R     D 
Sbjct: 107 AAAAASRSVPTPHAAAIMHRRRI-------SNSIKSESDISDVLSEFGEKIERSGSVGDV 159

Query: 181 KIEGSE----SEGF-----SSADAEI-ATEV-EELKDGSADIQVHTDSSLVS------EE 223
              G+E     EGF     S  D  I A EV E+  +   D++   D   VS      E 
Sbjct: 160 DFRGAELEERFEGFVERSESVGDVRIDAIEVNEDDVNMKNDVKSDLDKCFVSNLLNSVEN 219

Query: 224 KSDLDEFPENDIDSAPFDDVGGS-------------------------------GEKGIV 252
             D D+   +   S PF DVGG+                               GEK   
Sbjct: 220 SHDHDDNGLDSTKSTPF-DVGGAENGHDHDSKGLISASFDVVVDDVDDENEDKFGEKSSF 278

Query: 253 DFVDVGEKGITEAEELVSGSGFVEEGIRNE 282
           D+  VG+ GI E EE+V+G G V EGI NE
Sbjct: 279 DY--VGDNGINEKEEIVNGVGVV-EGIGNE 305