Miyakogusa Predicted Gene

Lj0g3v0324199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324199.1 Non Characterized Hit- tr|C5WXS0|C5WXS0_SORBI
Putative uncharacterized protein Sb01g046500
OS=Sorghu,48.72,1e-18,seg,NULL; A_thal_3678: uncharacterized
plant-specific domain,Ovate  protein family, C-terminal;
Ovat,CUFF.22019.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095150.1 | ovate transcriptional repressor | HC | chr7:38...   135   4e-32
Medtr1g072110.1 | ovate transcriptional repressor | HC | chr1:31...   135   5e-32
Medtr1g103640.1 | ovate transcriptional repressor | HC | chr1:46...    82   4e-16
Medtr2g102140.1 | ovate transcriptional repressor | HC | chr2:43...    53   2e-07
Medtr7g105780.1 | ovate transcriptional repressor | HC | chr7:42...    53   2e-07

>Medtr7g095150.1 | ovate transcriptional repressor | HC |
           chr7:38042905-38042233 | 20130731
          Length = 209

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 120/237 (50%), Gaps = 47/237 (19%)

Query: 1   MPTTMQESESDVTRKRRSNYHNLRRLN-LCFSSSTFXXXXXXXXXXXXXXXXXXXXXXXX 59
           MPTT+        R RR N  NL+RLN LCFS  TF                        
Sbjct: 1   MPTTL--------RTRRRN--NLKRLNYLCFS--TFIQPQSPAPTSSLLQEIDH------ 42

Query: 60  XNRPSPTTNATSSIMINNFNTTFYXXXXXXXXXXXXNQIEPEPESKPADFATAFASQRFF 119
            NRPS    +TSS MI NFNT ++                 EPE + AD ATAFAS RFF
Sbjct: 43  -NRPS---FSTSSTMIKNFNTLYHHHTT-------------EPEPQLADIATAFASNRFF 85

Query: 120 FSSPGRSNSIIERANTNSTA----------ASRCNSNKSRQILDGSVAVPTYSPDPYADF 169
           FSSPGRSNSI+E   ++ ++          A   +SNK + + +GSVAVPTYSPDPY DF
Sbjct: 86  FSSPGRSNSIVESTPSSFSSSSSLLVSTVPAPANDSNKKKTVFNGSVAVPTYSPDPYMDF 145

Query: 170 LRSMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDLLVTVM 226
            RSMQEMVEA+P                        N  +THKFIL AFSDL+VT+M
Sbjct: 146 RRSMQEMVEAQP-ELMKDVKSNWETLHELLLSYLAINPNNTHKFILDAFSDLIVTLM 201


>Medtr1g072110.1 | ovate transcriptional repressor | HC |
           chr1:31980235-31981441 | 20130731
          Length = 237

 Score =  135 bits (339), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 114/237 (48%), Gaps = 29/237 (12%)

Query: 19  NYHNLRRLNLCFSSSTFXXXXXXXX-XXXXXXXXXXXXXXXXXNRPSPTTNATSSIMINN 77
           N  NLR LNLCFS+ST                            +   ++  + SIMI N
Sbjct: 3   NTRNLRNLNLCFSNSTLESKSPPTSPISTTISEASSHQHHHQILQKPSSSTPSPSIMIKN 62

Query: 78  FNTTF-----------YXXXXXXXXXXXXNQIEPEPESKPADFATAFASQRFFFSSPGRS 126
           FN+ +                          +E EPE +PADFA AFASQRFFFSSPG S
Sbjct: 63  FNSLYDPSLTSDHTLCSSSLSTTFTTSTSFDLEIEPEPEPADFAAAFASQRFFFSSPGSS 122

Query: 127 NSIIERANT--------------NSTAASRCNSNKSRQIL-DGSVAVPTYSPDPYADFLR 171
           NS+IE  NT              NST   +    +  ++L +GSVAVPTYSPDPY DF R
Sbjct: 123 NSLIEYTNTDCIQHSSVPLMDKSNSTKREKKQEKEKEEVLFNGSVAVPTYSPDPYMDFRR 182

Query: 172 SMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDLLVTVMSF 228
           SMQEMVEARP                        N K+THKFIL AF+DLLVT+MSF
Sbjct: 183 SMQEMVEARP--ELMDVKSNWNILHELLLCYLALNPKNTHKFILGAFADLLVTLMSF 237


>Medtr1g103640.1 | ovate transcriptional repressor | HC |
           chr1:46913217-46914470 | 20130731
          Length = 238

 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 103 ESKPADFATAFASQRFFFSSPGRSNSIIERANTNSTAASRCNSNKSRQILDGSVA-VPTY 161
           E  P DF++ FASQRFFFSSPG SNSI E  + ++     CN++   +   GSV  VP Y
Sbjct: 63  ELPPPDFSSVFASQRFFFSSPGSSNSITESPSNDTLP---CNNSLIPR--GGSVKRVPKY 117

Query: 162 SPDPYADFLRSMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDL 221
           S +PY DFLRSMQEM++++                         N   THK+I++AF+ L
Sbjct: 118 SVNPYVDFLRSMQEMIQSQ--QQVVDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHL 175

Query: 222 LVTV 225
           LV +
Sbjct: 176 LVDI 179


>Medtr2g102140.1 | ovate transcriptional repressor | HC |
           chr2:43952185-43954176 | 20130731
          Length = 311

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 26/133 (19%)

Query: 119 FFSSPGRSNSIIERAN--TNSTAASRC---------NSNKSRQIL-------------DG 154
           FF  PG S S++E A   TNS  A             ++ S+Q++             + 
Sbjct: 142 FFVKPGNSGSLMEDALSLTNSDEADSSNSNNSNSSSTASPSKQVIVVNHDDHNHHTLPEN 201

Query: 155 SVAVPTYSPDPYADFLRSMQEMVEAR-PXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKF 213
            VA+ +YSP PY DF RSMQE+VE++                          N+K +HKF
Sbjct: 202 CVALLSYSPSPYDDFRRSMQELVESKYGKIENNQRKIDWDFMEEILFCYLNVNEKKSHKF 261

Query: 214 ILRAFSDLLVTVM 226
           IL AF D L+TVM
Sbjct: 262 ILSAFVD-LITVM 273


>Medtr7g105780.1 | ovate transcriptional repressor | HC |
           chr7:42928893-42930099 | 20130731
          Length = 287

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 101 EPESKPAD----FATAFASQRFFFSSPGRSNSIIERANTNSTAASRCNSNKSRQILDGSV 156
           + ESK  D         +S RFFF  P  +NSI+E    N+ AA+             SV
Sbjct: 82  DQESKQVDSIETVIRGLSSDRFFFE-PDETNSILE---VNNKAAAIGGGETQSLPFKDSV 137

Query: 157 AVPTYSPDPYADFLRSMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILR 216
            +   S DPY DF +SM+E+VEA                          N+K  H +I+ 
Sbjct: 138 VLSMESRDPYVDFRKSMEEIVEAHD-------VKDWEGLQELLSWYLKVNEKINHGYIVG 190

Query: 217 AFSDLLV 223
           AF DLLV
Sbjct: 191 AFVDLLV 197