Miyakogusa Predicted Gene

Lj0g3v0324189.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324189.2 tr|H8WVC7|H8WVC7_LOTJA E3 ubiquitin ligase-like
protein (Fragment) OS=Lotus japonicus GN=SINA5 PE=2 ,100,0,SEVEN IN
ABSENTIA HOMOLOG,Seven-in-absentia protein, sina; TRAF
domain-like,TRAF-like; ZF_SIAH,Zinc ,CUFF.22053.2
         (169 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g054335.1 | ubiquitin ligase SINAT3 | HC | chr1:23400280-2...   296   5e-81
Medtr7g093600.2 | ubiquitin ligase SINAT3 | HC | chr7:37208750-3...   281   2e-76
Medtr7g093600.1 | ubiquitin ligase SINAT3 | HC | chr7:37208267-3...   281   2e-76
Medtr3g091510.1 | ubiquitin ligase SINAT3 | HC | chr3:41635603-4...   267   3e-72
Medtr1g008120.1 | ubiquitin ligase SINAT3 | HC | chr1:732376-737...   266   6e-72
Medtr3g017590.1 | ubiquitin ligase SINAT3 | HC | chr3:5040231-50...   265   2e-71
Medtr8g038370.1 | ubiquitin ligase SINAT3 | HC | chr8:14231466-1...   260   4e-70
Medtr8g027520.1 | ubiquitin ligase SINAT3 | HC | chr8:9833064-98...   255   1e-68
Medtr8g027520.2 | ubiquitin ligase SINAT3 | HC | chr8:9833950-98...   255   2e-68
Medtr7g117415.1 | ubiquitin ligase SINAT3 | HC | chr7:48544033-4...   251   3e-67

>Medtr1g054335.1 | ubiquitin ligase SINAT3 | HC |
           chr1:23400280-23404620 | 20130731
          Length = 309

 Score =  296 bits (759), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 139/168 (82%), Positives = 151/168 (89%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHEQNCRFRPY CPYAGSECS+M DI  L+ HLK DHKVDVHDG TFNHRYVKSNPHEV
Sbjct: 136 LKHEQNCRFRPYSCPYAGSECSMMCDIQALMNHLKDDHKVDVHDGFTFNHRYVKSNPHEV 195

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVFNCF ++FCLHFEAFLLG APVY+AFLRFLG++ EA KFR++LEVGANSRK
Sbjct: 196 ENATWMLTVFNCFGKHFCLHFEAFLLGTAPVYMAFLRFLGDEKEAKKFRYSLEVGANSRK 255

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LIWQGIPRSIR SHRKVRD QDGLII R+LALYFS GDKQQLK ++TG
Sbjct: 256 LIWQGIPRSIRESHRKVRDSQDGLIIQRNLALYFSGGDKQQLKLRVTG 303


>Medtr7g093600.2 | ubiquitin ligase SINAT3 | HC |
           chr7:37208750-37211962 | 20130731
          Length = 310

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 148/168 (88%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHEQNC FRPY CPYAGSECSVMGDIP L+ HLK +HKVD+HDG TFNHRYVK+NPHEV
Sbjct: 137 LKHEQNCGFRPYNCPYAGSECSVMGDIPNLVDHLKDEHKVDMHDGFTFNHRYVKTNPHEV 196

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVFNC+ ++FCLHFEAF LG APV++AFLRF+G+DNE+ KF ++LEVGA  RK
Sbjct: 197 ENATWMLTVFNCYGKHFCLHFEAFQLGTAPVFMAFLRFMGDDNESKKFSYSLEVGAYGRK 256

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LIWQGIPRSIR+SH KVRD QDGLII R+ ALYFS GDK++LK +ITG
Sbjct: 257 LIWQGIPRSIRDSHGKVRDSQDGLIIQRNQALYFSGGDKKELKLRITG 304


>Medtr7g093600.1 | ubiquitin ligase SINAT3 | HC |
           chr7:37208267-37212195 | 20130731
          Length = 310

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 148/168 (88%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHEQNC FRPY CPYAGSECSVMGDIP L+ HLK +HKVD+HDG TFNHRYVK+NPHEV
Sbjct: 137 LKHEQNCGFRPYNCPYAGSECSVMGDIPNLVDHLKDEHKVDMHDGFTFNHRYVKTNPHEV 196

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVFNC+ ++FCLHFEAF LG APV++AFLRF+G+DNE+ KF ++LEVGA  RK
Sbjct: 197 ENATWMLTVFNCYGKHFCLHFEAFQLGTAPVFMAFLRFMGDDNESKKFSYSLEVGAYGRK 256

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LIWQGIPRSIR+SH KVRD QDGLII R+ ALYFS GDK++LK +ITG
Sbjct: 257 LIWQGIPRSIRDSHGKVRDSQDGLIIQRNQALYFSGGDKKELKLRITG 304


>Medtr3g091510.1 | ubiquitin ligase SINAT3 | HC |
           chr3:41635603-41632500 | 20130731
          Length = 324

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 118/168 (70%), Positives = 143/168 (85%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHE  C FRPY CPYAGSECS +GDI  L+ HL+ DHKVD+H GCTFNHRYVKSNP EV
Sbjct: 138 LKHETECNFRPYSCPYAGSECSTVGDISFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREV 197

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVF+CF +YFCLHFEAF LG APVY+AFLRF+G++N+A  + ++LEVGAN RK
Sbjct: 198 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRK 257

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LIW+G PRS+R+SHRKVRD  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 258 LIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 305


>Medtr1g008120.1 | ubiquitin ligase SINAT3 | HC | chr1:732376-737785
           | 20130731
          Length = 333

 Score =  266 bits (681), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 120/168 (71%), Positives = 143/168 (85%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHE  C FRPY CPYAGSECS +GDI  L+ HL+ DHKVD+H GCTFNHRYVKSNP EV
Sbjct: 146 LKHETICNFRPYTCPYAGSECSAVGDINFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREV 205

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVF+CF +YFCLHFEAF LG APVY+AFLRF+G++NEA  + ++LEVGAN RK
Sbjct: 206 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGANGRK 265

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LIW+G PRSIR+SHRKVRD  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 266 LIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 313


>Medtr3g017590.1 | ubiquitin ligase SINAT3 | HC |
           chr3:5040231-5036144 | 20130731
          Length = 304

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 118/168 (70%), Positives = 142/168 (84%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHE  C FRPY CPYAGSEC+V+GD+  L+ HLK DHKVD+H GCTFNHRYVKSNP EV
Sbjct: 131 LKHESQCVFRPYNCPYAGSECAVVGDVQFLVDHLKDDHKVDMHSGCTFNHRYVKSNPQEV 190

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVF+CF +YFCLHFEAF LG APVYIAFLRF+G+D++A  + ++LEVG N RK
Sbjct: 191 ENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDDQAKNYTYSLEVGGNGRK 250

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           + WQG+PRSIR SHRKVRD  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 251 MTWQGVPRSIRESHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTG 298


>Medtr8g038370.1 | ubiquitin ligase SINAT3 | HC |
           chr8:14231466-14233195 | 20130731
          Length = 363

 Score =  260 bits (665), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 114/167 (68%), Positives = 140/167 (83%)

Query: 3   KHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEVE 62
           +HE  C +RPY CPYAGSECSV+GDI  L+ HLK DHKVD+H+G TFNHRYVKSNP +VE
Sbjct: 191 EHESQCSYRPYNCPYAGSECSVVGDINYLVTHLKEDHKVDMHNGSTFNHRYVKSNPQDVE 250

Query: 63  NAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRKL 122
           NA WMLTVF+CF +YFCLHFE F LG APVYIAFLRF+GED+EA  + ++LEVG N RK+
Sbjct: 251 NATWMLTVFSCFGKYFCLHFETFQLGMAPVYIAFLRFMGEDSEAKNYSYSLEVGGNGRKM 310

Query: 123 IWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           +WQG+PRSIR SH K+RD  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 311 VWQGVPRSIRESHSKIRDSFDGLIIQRNMALFFSGGDRKELKLRVTG 357


>Medtr8g027520.1 | ubiquitin ligase SINAT3 | HC |
           chr8:9833064-9837489 | 20130731
          Length = 318

 Score =  255 bits (652), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 113/168 (67%), Positives = 142/168 (84%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHE  C FRPY CPYAGS+CSV+GDI  L+ HL+ DH+VD+H GCTFNHRYVKSNP EV
Sbjct: 131 LKHESICNFRPYNCPYAGSDCSVVGDISQLVAHLRDDHRVDMHSGCTFNHRYVKSNPMEV 190

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVF+CF +YFCLHFEAF LG APVY+AFLRF+G++ +A  + ++LEVG + RK
Sbjct: 191 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDERDARSYSYSLEVGGSGRK 250

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LI++G PRSIR+SH+KVRD  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 251 LIYEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTG 298


>Medtr8g027520.2 | ubiquitin ligase SINAT3 | HC |
           chr8:9833950-9837762 | 20130731
          Length = 309

 Score =  255 bits (651), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 113/168 (67%), Positives = 142/168 (84%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHE  C FRPY CPYAGS+CSV+GDI  L+ HL+ DH+VD+H GCTFNHRYVKSNP EV
Sbjct: 122 LKHESICNFRPYNCPYAGSDCSVVGDISQLVAHLRDDHRVDMHSGCTFNHRYVKSNPMEV 181

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVF+CF +YFCLHFEAF LG APVY+AFLRF+G++ +A  + ++LEVG + RK
Sbjct: 182 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDERDARSYSYSLEVGGSGRK 241

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           LI++G PRSIR+SH+KVRD  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 242 LIYEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTG 289


>Medtr7g117415.1 | ubiquitin ligase SINAT3 | HC |
           chr7:48544033-48541598 | 20130731
          Length = 323

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 111/168 (66%), Positives = 140/168 (83%)

Query: 2   LKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEV 61
           LKHE  C FRPY CPYAGS+CSV+G+IP L+ HL+ DH VD+H GCTFNHRYVKSNP EV
Sbjct: 139 LKHESICTFRPYNCPYAGSDCSVVGNIPYLVAHLRDDHGVDMHSGCTFNHRYVKSNPTEV 198

Query: 62  ENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRK 121
           ENA WMLTVF+CF +YFCLHFEAF L  +PVY+AFLRF+G+D +A  + ++LEVG N RK
Sbjct: 199 ENATWMLTVFHCFGQYFCLHFEAFQLETSPVYMAFLRFMGDDRDAKNYSYSLEVGGNGRK 258

Query: 122 LIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITG 169
           L ++G PRSIR+SH+KV+D  DGLII R++AL+FS GD+++LK ++TG
Sbjct: 259 LTFEGSPRSIRDSHKKVKDSHDGLIIYRNMALFFSGGDRKELKLRVTG 306