Miyakogusa Predicted Gene

Lj0g3v0324049.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324049.1 tr|Q9LQV4|Q9LQV4_ARATH F10B6.17 OS=Arabidopsis
thaliana GN=At1g14770/F10B6_2 PE=2
SV=1,30.77,0.00000000000005,seg,NULL,CUFF.22013.1
         (190 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g005950.2 | PHD-finger protein | HC | chr2:397934-401066 |...   143   9e-35
Medtr2g005950.3 | PHD-finger protein | HC | chr2:397934-401066 |...   143   9e-35
Medtr2g005950.1 | PHD-finger protein | HC | chr2:397934-401235 |...   143   1e-34

>Medtr2g005950.2 | PHD-finger protein | HC | chr2:397934-401066 |
           20130731
          Length = 475

 Score =  143 bits (361), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 102/151 (67%), Gaps = 9/151 (5%)

Query: 18  VIEALAGFKGISISALQGLIDLAPVGPDDLGESTRELVALRCLEELSAASVQGVNHLDAS 77
           VIEALAGFK I++  LQ LID + +   D  E+T++L+AL+CLEEL  +S      L+  
Sbjct: 14  VIEALAGFKEITLPTLQALIDASLLTHHDFSETTKDLIALKCLEELYPSSSSSTTTLEE- 72

Query: 78  STLDFRAGFDFSRSCEEVLREIFHEIQLSDLEMAGEMVLKSNIPPFIMHKRASTVKCQLE 137
                    D S S ++VL +I H++ LS+L  +G  + K ++  FI HKRA  VKCQLE
Sbjct: 73  --------LDSSLSSQDVLLQILHQVSLSNLRTSGPELFKWDVNRFIAHKRADNVKCQLE 124

Query: 138 QLKESILEGTLPLTDYLKERSGLFQSNRGYT 168
           +LKESIL+GTLPL D+LKERSGLFQ+NR +T
Sbjct: 125 KLKESILDGTLPLNDHLKERSGLFQTNRAHT 155


>Medtr2g005950.3 | PHD-finger protein | HC | chr2:397934-401066 |
           20130731
          Length = 477

 Score =  143 bits (361), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 102/151 (67%), Gaps = 9/151 (5%)

Query: 18  VIEALAGFKGISISALQGLIDLAPVGPDDLGESTRELVALRCLEELSAASVQGVNHLDAS 77
           VIEALAGFK I++  LQ LID + +   D  E+T++L+AL+CLEEL  +S      L+  
Sbjct: 14  VIEALAGFKEITLPTLQALIDASLLTHHDFSETTKDLIALKCLEELYPSSSSSTTTLEE- 72

Query: 78  STLDFRAGFDFSRSCEEVLREIFHEIQLSDLEMAGEMVLKSNIPPFIMHKRASTVKCQLE 137
                    D S S ++VL +I H++ LS+L  +G  + K ++  FI HKRA  VKCQLE
Sbjct: 73  --------LDSSLSSQDVLLQILHQVSLSNLRTSGPELFKWDVNRFIAHKRADNVKCQLE 124

Query: 138 QLKESILEGTLPLTDYLKERSGLFQSNRGYT 168
           +LKESIL+GTLPL D+LKERSGLFQ+NR +T
Sbjct: 125 KLKESILDGTLPLNDHLKERSGLFQTNRAHT 155


>Medtr2g005950.1 | PHD-finger protein | HC | chr2:397934-401235 |
           20130731
          Length = 499

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 102/151 (67%), Gaps = 9/151 (5%)

Query: 18  VIEALAGFKGISISALQGLIDLAPVGPDDLGESTRELVALRCLEELSAASVQGVNHLDAS 77
           VIEALAGFK I++  LQ LID + +   D  E+T++L+AL+CLEEL  +S      L+  
Sbjct: 14  VIEALAGFKEITLPTLQALIDASLLTHHDFSETTKDLIALKCLEELYPSSSSSTTTLEE- 72

Query: 78  STLDFRAGFDFSRSCEEVLREIFHEIQLSDLEMAGEMVLKSNIPPFIMHKRASTVKCQLE 137
                    D S S ++VL +I H++ LS+L  +G  + K ++  FI HKRA  VKCQLE
Sbjct: 73  --------LDSSLSSQDVLLQILHQVSLSNLRTSGPELFKWDVNRFIAHKRADNVKCQLE 124

Query: 138 QLKESILEGTLPLTDYLKERSGLFQSNRGYT 168
           +LKESIL+GTLPL D+LKERSGLFQ+NR +T
Sbjct: 125 KLKESILDGTLPLNDHLKERSGLFQTNRAHT 155