Miyakogusa Predicted Gene

Lj0g3v0323599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0323599.1 tr|G7JGG5|G7JGG5_MEDTR Ferredoxin-6 OS=Medicago
truncatula GN=MTR_4g098490 PE=2 SV=1,79.79,0,2Fe-2S
ferredoxin-like,2Fe-2S ferredoxin-type domain; Fer2,2Fe-2S
ferredoxin-type domain; fdx_plant:,CUFF.21981.1
         (184 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g098490.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   278   3e-75
Medtr1g112030.4 | 2Fe-2S ferredoxin superfamily protein | HC | c...    72   3e-13
Medtr1g112030.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    72   3e-13
Medtr1g112030.2 | 2Fe-2S ferredoxin superfamily protein | HC | c...    72   3e-13
Medtr1g112030.3 | 2Fe-2S ferredoxin superfamily protein | HC | c...    72   3e-13
Medtr2g086510.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    71   5e-13
Medtr1g112050.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    71   7e-13
Medtr2g006290.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    68   6e-12
Medtr4g053120.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    67   9e-12
Medtr8g088720.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    65   4e-11
Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    55   3e-08

>Medtr4g098490.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr4:40576223-40581012 | 20130731
          Length = 186

 Score =  278 bits (710), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 139/188 (73%), Positives = 149/188 (79%), Gaps = 6/188 (3%)

Query: 1   MALSFLRIPGNCC--IPYTNLQP--FPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPG 56
           MAL  LRIP + C  IP+ N +P   PSK  LRK+TV AAA ELQ P+ L    DY +P 
Sbjct: 1   MALPLLRIPSSSCCSIPFINTKPQYLPSKT-LRKSTV-AAATELQTPVRLTEANDYRYPS 58

Query: 57  GNVPTHKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQ 116
           G+ PTHKVTVHDRQRGVVHEF VPEDQYILHTAESQNI LPFACRHGCCTSCAVRIKNG+
Sbjct: 59  GDAPTHKVTVHDRQRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKNGK 118

Query: 117 IKQPQALGISAELREKGYALLCVSFPTSXXXXXXXXXXXXYWLQFGRYFARGPVERDDYA 176
           IKQP+ALGISAELRE+GYALLCVSFP S            YWLQFGRYFARGPVERDDYA
Sbjct: 119 IKQPEALGISAELREQGYALLCVSFPYSDLEVETQDEDEVYWLQFGRYFARGPVERDDYA 178

Query: 177 LELAMGDE 184
           LELAMGDE
Sbjct: 179 LELAMGDE 186


>Medtr1g112030.4 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655412-50652678 | 20130731
          Length = 160

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 72  GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
           G  +EF  P+D YIL +AE   + LP++CR G C++CA ++  G + Q     +  +  E
Sbjct: 75  GTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIE 134

Query: 132 KGYALLCVSFPTS 144
           KGY L CVS+P S
Sbjct: 135 KGYLLTCVSYPKS 147


>Medtr1g112030.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655412-50652675 | 20130731
          Length = 156

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 72  GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
           G  +EF  P+D YIL +AE   + LP++CR G C++CA ++  G + Q     +  +  E
Sbjct: 71  GTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIE 130

Query: 132 KGYALLCVSFPTS 144
           KGY L CVS+P S
Sbjct: 131 KGYLLTCVSYPKS 143


>Medtr1g112030.2 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655291-50652678 | 20130731
          Length = 156

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 72  GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
           G  +EF  P+D YIL +AE   + LP++CR G C++CA ++  G + Q     +  +  E
Sbjct: 71  GTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIE 130

Query: 132 KGYALLCVSFPTS 144
           KGY L CVS+P S
Sbjct: 131 KGYLLTCVSYPKS 143


>Medtr1g112030.3 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655297-50652678 | 20130731
          Length = 156

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 72  GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
           G  +EF  P+D YIL +AE   + LP++CR G C++CA ++  G + Q     +  +  E
Sbjct: 71  GTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIE 130

Query: 132 KGYALLCVSFPTS 144
           KGY L CVS+P S
Sbjct: 131 KGYLLTCVSYPKS 143


>Medtr2g086510.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr2:36370630-36373136 | 20130731
          Length = 155

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 2   ALSFLRIPGNCCIPYTNLQPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNVPT 61
           ALS +++   C +  TN   F +   ++  + + +A  +    GL            V  
Sbjct: 3   ALSTVKVYRYCTLKATNQNQFTTAATVKCPSSLGSAKNVSRSFGLKSSASSRVTA--VAA 60

Query: 62  HKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQ 121
           +KV +     G  +EF   +D YIL  AE+  + LP++CR G C++CA ++ +G + Q  
Sbjct: 61  YKVKLIGPD-GKENEFEATDDTYILDAAENAGVELPYSCRAGACSTCAGKVVSGSVDQSD 119

Query: 122 ALGISAELREKGYALLCVSFPTS 144
              +      +GY L CV++PTS
Sbjct: 120 GSFLDDNQLNEGYVLTCVAYPTS 142


>Medtr1g112050.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50664256-50662165 | 20130731
          Length = 154

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 72  GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
           G  +EF  P+D YIL +AE   + LP++CR G C++CA ++ +G + Q     +  +  E
Sbjct: 69  GTENEFDAPDDYYILDSAEEAGVELPYSCRAGACSTCAGQVVSGSVDQSDQSFLDKQQIE 128

Query: 132 KGYALLCVSFPTS 144
           KGY L CVS+P S
Sbjct: 129 KGYLLTCVSYPKS 141


>Medtr2g006290.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr2:526002-525142 | 20130731
          Length = 150

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 42/71 (59%)

Query: 74  VHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKG 133
             EF  P D YIL  AE   I+LP++CR G C+SCA ++  G + Q     +  +  E+G
Sbjct: 66  TQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDGSFLDDDQIEEG 125

Query: 134 YALLCVSFPTS 144
           + L CV++PTS
Sbjct: 126 WVLTCVAYPTS 136


>Medtr4g053120.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr4:19231223-19228071 | 20130731
          Length = 155

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%)

Query: 72  GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
           G  +EF  P+D YIL  AE   + LP++CR G C++CA +I +G + Q     +     +
Sbjct: 70  GKENEFDAPDDVYILDAAEDAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLK 129

Query: 132 KGYALLCVSFPTS 144
            G+ L CVS+PT+
Sbjct: 130 DGFVLTCVSYPTA 142


>Medtr8g088720.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr8:36851760-36851051 | 20130731
          Length = 148

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%)

Query: 74  VHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKG 133
             E + P+++YIL  AE Q I+LP++CR G C+SCA ++  G++       +  +    G
Sbjct: 64  TKELTCPDNEYILDVAEEQGIDLPYSCRAGACSSCAAKVVEGEVDNSDNSFLDDDQLSAG 123

Query: 134 YALLCVSFPTS 144
           + L CV++P S
Sbjct: 124 FVLTCVAYPRS 134


>Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr5:857389-856587 | 20130731
          Length = 153

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 61  THKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQP 120
           ++KV +     G   +  V  D+ IL  A    +++P  C+ G C +C  R+ +G + Q 
Sbjct: 51  SYKVVIE--HEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108

Query: 121 QALGISAELREKGYALLCVSFPTS 144
             + +S ++ E+GYALLC S+P S
Sbjct: 109 DGM-LSDDVVERGYALLCASYPRS 131